EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000008014 (Gene tree)
Gene ID: 109962532
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 30975 bases
Position: chrKV884753.1:3220951-3251925
Accession: 109962532
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000011316	CPSF_A	PF03178.15	1.9e-99	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000011558	-	8168	XM_020604329	ENSMALP00000011316	1217 (aa)	XP_020459985	UPI0009B3CBE5

Gene Model

Click here to download ENSMALG00000008014's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000008014's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000008014	sf3b3	100	93.180	ENSG00000189091	SF3B3	100	98.246	Homo_sapiens
ENSMALG00000008014	sf3b3	96	98.121	ENSAPOG00000006172	sf3b3	98	98.121	Acanthochromis_polyacanthus
ENSMALG00000008014	sf3b3	100	93.033	ENSAMEG00000002187	SF3B3	100	93.033	Ailuropoda_melanoleuca
ENSMALG00000008014	sf3b3	92	95.179	ENSACIG00000016487	sf3b3	100	95.179	Amphilophus_citrinellus
ENSMALG00000008014	sf3b3	100	98.274	ENSAOCG00000007158	sf3b3	100	98.274	Amphiprion_ocellaris
ENSMALG00000008014	sf3b3	100	98.274	ENSAPEG00000022786	sf3b3	100	98.274	Amphiprion_percula
ENSMALG00000008014	sf3b3	100	98.192	ENSATEG00000013708	sf3b3	100	98.192	Anabas_testudineus
ENSMALG00000008014	sf3b3	81	93.089	ENSAPLG00000004996	SF3B3	99	93.089	Anas_platyrhynchos
ENSMALG00000008014	sf3b3	100	93.262	ENSACAG00000001817	SF3B3	100	93.262	Anolis_carolinensis
ENSMALG00000008014	sf3b3	100	93.180	ENSANAG00000028001	SF3B3	100	93.180	Aotus_nancymaae
ENSMALG00000008014	sf3b3	96	97.950	ENSACLG00000022555	sf3b3	98	97.950	Astatotilapia_calliptera
ENSMALG00000008014	sf3b3	100	97.206	ENSAMXG00000003410	sf3b3	100	97.206	Astyanax_mexicanus
ENSMALG00000008014	sf3b3	100	93.180	ENSBTAG00000010627	SF3B3	100	93.180	Bos_taurus
ENSMALG00000008014	sf3b3	100	60.097	WBGene00019323	teg-4	100	60.097	Caenorhabditis_elegans
ENSMALG00000008014	sf3b3	100	93.180	ENSCJAG00000014773	SF3B3	99	93.180	Callithrix_jacchus
ENSMALG00000008014	sf3b3	100	93.262	ENSCAFG00000020151	SF3B3	100	93.262	Canis_familiaris
ENSMALG00000008014	sf3b3	100	93.262	ENSCAFG00020020912	SF3B3	100	93.262	Canis_lupus_dingo
ENSMALG00000008014	sf3b3	100	93.262	ENSCHIG00000019822	SF3B3	100	93.262	Capra_hircus
ENSMALG00000008014	sf3b3	100	93.180	ENSTSYG00000007910	SF3B3	100	93.180	Carlito_syrichta
ENSMALG00000008014	sf3b3	84	79.634	ENSCAPG00000001484	SF3B3	92	79.634	Cavia_aperea
ENSMALG00000008014	sf3b3	100	91.865	ENSCPOG00000000586	SF3B3	100	91.865	Cavia_porcellus
ENSMALG00000008014	sf3b3	100	93.180	ENSCCAG00000017736	SF3B3	100	93.180	Cebus_capucinus
ENSMALG00000008014	sf3b3	100	93.180	ENSCATG00000036562	SF3B3	100	93.180	Cercocebus_atys
ENSMALG00000008014	sf3b3	100	93.180	ENSCLAG00000003921	SF3B3	100	93.180	Chinchilla_lanigera
ENSMALG00000008014	sf3b3	100	93.180	ENSCSAG00000004371	SF3B3	100	93.180	Chlorocebus_sabaeus
ENSMALG00000008014	sf3b3	90	90.343	ENSCHOG00000001878	SF3B3	90	90.343	Choloepus_hoffmanni
ENSMALG00000008014	sf3b3	100	92.851	ENSCPBG00000015853	SF3B3	100	92.851	Chrysemys_picta_bellii
ENSMALG00000008014	sf3b3	100	80.131	ENSCING00000001342	-	100	80.131	Ciona_intestinalis
ENSMALG00000008014	sf3b3	99	78.571	ENSCSAVG00000011454	-	100	78.571	Ciona_savignyi
ENSMALG00000008014	sf3b3	100	89.565	ENSCANG00000042920	SF3B3	100	90.058	Colobus_angolensis_palliatus
ENSMALG00000008014	sf3b3	100	93.098	ENSCGRG00001015908	Sf3b3	100	93.098	Cricetulus_griseus_chok1gshd
ENSMALG00000008014	sf3b3	100	93.098	ENSCGRG00000010180	Sf3b3	100	93.098	Cricetulus_griseus_crigri
ENSMALG00000008014	sf3b3	82	96.307	ENSCSEG00000014192	sf3b3	99	96.307	Cynoglossus_semilaevis
ENSMALG00000008014	sf3b3	100	97.371	ENSCVAG00000010459	sf3b3	100	97.371	Cyprinodon_variegatus
ENSMALG00000008014	sf3b3	100	96.385	ENSDARG00000103553	sf3b3	100	96.385	Danio_rerio
ENSMALG00000008014	sf3b3	85	92.671	ENSDNOG00000043626	SF3B3	100	92.671	Dasypus_novemcinctus
ENSMALG00000008014	sf3b3	100	93.180	ENSDORG00000014176	Sf3b3	100	93.180	Dipodomys_ordii
ENSMALG00000008014	sf3b3	100	74.735	FBgn0035162	Sf3b3	100	74.735	Drosophila_melanogaster
ENSMALG00000008014	sf3b3	84	96.203	ENSETEG00000002729	SF3B3	84	96.203	Echinops_telfairi
ENSMALG00000008014	sf3b3	100	86.360	ENSEBUG00000006117	sf3b3	100	86.360	Eptatretus_burgeri
ENSMALG00000008014	sf3b3	100	93.262	ENSEASG00005013376	SF3B3	100	93.262	Equus_asinus_asinus
ENSMALG00000008014	sf3b3	100	93.262	ENSECAG00000014053	SF3B3	100	93.262	Equus_caballus
ENSMALG00000008014	sf3b3	93	93.158	ENSEEUG00000015611	SF3B3	93	93.158	Erinaceus_europaeus
ENSMALG00000008014	sf3b3	100	95.492	ENSELUG00000015417	sf3b3	100	95.492	Esox_lucius
ENSMALG00000008014	sf3b3	100	93.262	ENSFCAG00000009487	SF3B3	100	93.262	Felis_catus
ENSMALG00000008014	sf3b3	100	92.933	ENSFALG00000007372	SF3B3	100	92.933	Ficedula_albicollis
ENSMALG00000008014	sf3b3	100	93.180	ENSFDAG00000002608	SF3B3	100	93.180	Fukomys_damarensis
ENSMALG00000008014	sf3b3	100	97.946	ENSFHEG00000017824	sf3b3	100	97.946	Fundulus_heteroclitus
ENSMALG00000008014	sf3b3	100	93.103	ENSGMOG00000008139	sf3b3	100	93.103	Gadus_morhua
ENSMALG00000008014	sf3b3	100	93.180	ENSGALG00000002531	SF3B3	100	93.180	Gallus_gallus
ENSMALG00000008014	sf3b3	100	97.371	ENSGAFG00000015206	sf3b3	100	97.371	Gambusia_affinis
ENSMALG00000008014	sf3b3	100	97.455	ENSGACG00000002646	sf3b3	100	97.455	Gasterosteus_aculeatus
ENSMALG00000008014	sf3b3	96	92.997	ENSGAGG00000006746	SF3B3	97	92.997	Gopherus_agassizii
ENSMALG00000008014	sf3b3	100	93.180	ENSGGOG00000003246	SF3B3	100	93.180	Gorilla_gorilla
ENSMALG00000008014	sf3b3	92	90.982	ENSHBUG00000005960	sf3b3	100	90.982	Haplochromis_burtoni
ENSMALG00000008014	sf3b3	100	93.180	ENSHGLG00000010135	SF3B3	100	93.180	Heterocephalus_glaber_female
ENSMALG00000008014	sf3b3	100	91.079	ENSHGLG00100011148	SF3B3	100	91.079	Heterocephalus_glaber_male
ENSMALG00000008014	sf3b3	100	97.371	ENSHCOG00000011981	sf3b3	100	97.371	Hippocampus_comes
ENSMALG00000008014	sf3b3	100	97.042	ENSIPUG00000020435	sf3b3	100	97.042	Ictalurus_punctatus
ENSMALG00000008014	sf3b3	100	93.180	ENSSTOG00000007065	SF3B3	100	93.180	Ictidomys_tridecemlineatus
ENSMALG00000008014	sf3b3	100	93.180	ENSJJAG00000003948	Sf3b3	100	93.180	Jaculus_jaculus
ENSMALG00000008014	sf3b3	100	95.316	ENSKMAG00000004066	sf3b3	99	97.438	Kryptolebias_marmoratus
ENSMALG00000008014	sf3b3	100	97.617	ENSLBEG00000018302	sf3b3	100	97.617	Labrus_bergylta
ENSMALG00000008014	sf3b3	98	90.116	ENSLACG00000012501	SF3B3	99	90.116	Latimeria_chalumnae
ENSMALG00000008014	sf3b3	100	96.305	ENSLOCG00000007566	sf3b3	100	96.305	Lepisosteus_oculatus
ENSMALG00000008014	sf3b3	100	93.262	ENSLAFG00000012219	SF3B3	100	93.262	Loxodonta_africana
ENSMALG00000008014	sf3b3	100	93.180	ENSMFAG00000045487	SF3B3	100	93.180	Macaca_fascicularis
ENSMALG00000008014	sf3b3	100	93.180	ENSMMUG00000017812	SF3B3	100	93.180	Macaca_mulatta
ENSMALG00000008014	sf3b3	100	93.180	ENSMNEG00000033385	SF3B3	100	93.180	Macaca_nemestrina
ENSMALG00000008014	sf3b3	100	89.729	ENSMLEG00000043891	SF3B3	100	89.729	Mandrillus_leucophaeus
ENSMALG00000008014	sf3b3	100	98.685	ENSMAMG00000016837	sf3b3	100	98.685	Mastacembelus_armatus
ENSMALG00000008014	sf3b3	100	98.028	ENSMZEG00005010836	sf3b3	100	98.028	Maylandia_zebra
ENSMALG00000008014	sf3b3	89	94.912	ENSMZEG00005026015	sf3b3	99	94.912	Maylandia_zebra
ENSMALG00000008014	sf3b3	100	93.180	ENSMGAG00000001597	SF3B3	100	93.180	Meleagris_gallopavo
ENSMALG00000008014	sf3b3	81	76.280	ENSMAUG00000013618	Sf3b3	95	77.029	Mesocricetus_auratus
ENSMALG00000008014	sf3b3	100	92.125	ENSMICG00000001363	SF3B3	100	92.125	Microcebus_murinus
ENSMALG00000008014	sf3b3	100	93.098	ENSMOCG00000006108	Sf3b3	100	93.098	Microtus_ochrogaster
ENSMALG00000008014	sf3b3	89	95.005	ENSMMOG00000002598	sf3b3	97	95.005	Mola_mola
ENSMALG00000008014	sf3b3	100	89.163	ENSMODG00000014363	SF3B3	100	89.163	Monodelphis_domestica
ENSMALG00000008014	sf3b3	100	93.180	MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.180	Mus_caroli
ENSMALG00000008014	sf3b3	100	93.098	ENSMUSG00000033732	Sf3b3	100	93.098	Mus_musculus
ENSMALG00000008014	sf3b3	100	93.098	MGP_SPRETEiJ_G0032681	Sf3b3	100	93.098	Mus_spretus
ENSMALG00000008014	sf3b3	100	93.262	ENSMPUG00000010277	SF3B3	100	93.262	Mustela_putorius_furo
ENSMALG00000008014	sf3b3	100	93.098	ENSMLUG00000014607	SF3B3	100	93.098	Myotis_lucifugus
ENSMALG00000008014	sf3b3	100	93.180	ENSNGAG00000021903	Sf3b3	100	93.180	Nannospalax_galili
ENSMALG00000008014	sf3b3	83	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSMALG00000008014	sf3b3	100	91.790	ENSNLEG00000016127	SF3B3	100	91.790	Nomascus_leucogenys
ENSMALG00000008014	sf3b3	92	89.142	ENSMEUG00000004479	SF3B3	94	89.142	Notamacropus_eugenii
ENSMALG00000008014	sf3b3	98	90.025	ENSOPRG00000009847	SF3B3	100	90.025	Ochotona_princeps
ENSMALG00000008014	sf3b3	100	93.180	ENSODEG00000014154	SF3B3	100	93.180	Octodon_degus
ENSMALG00000008014	sf3b3	100	98.274	ENSONIG00000011198	sf3b3	100	98.274	Oreochromis_niloticus
ENSMALG00000008014	sf3b3	100	93.344	ENSOANG00000001161	-	100	93.344	Ornithorhynchus_anatinus
ENSMALG00000008014	sf3b3	100	91.208	ENSOCUG00000004139	SF3B3	100	91.208	Oryctolagus_cuniculus
ENSMALG00000008014	sf3b3	100	97.288	ENSORLG00000013472	sf3b3	100	97.288	Oryzias_latipes
ENSMALG00000008014	sf3b3	100	97.288	ENSORLG00020017473	sf3b3	100	97.288	Oryzias_latipes_hni
ENSMALG00000008014	sf3b3	100	97.288	ENSORLG00015007710	sf3b3	100	97.288	Oryzias_latipes_hsok
ENSMALG00000008014	sf3b3	100	97.206	ENSOMEG00000014483	sf3b3	100	97.206	Oryzias_melastigma
ENSMALG00000008014	sf3b3	100	92.869	ENSOGAG00000016051	SF3B3	100	92.869	Otolemur_garnettii
ENSMALG00000008014	sf3b3	100	93.033	ENSOARG00000004816	SF3B3	100	93.033	Ovis_aries
ENSMALG00000008014	sf3b3	100	93.180	ENSPPAG00000026807	SF3B3	100	93.180	Pan_paniscus
ENSMALG00000008014	sf3b3	100	93.262	ENSPPRG00000001686	SF3B3	100	93.262	Panthera_pardus
ENSMALG00000008014	sf3b3	89	90.156	ENSPTIG00000020382	SF3B3	100	90.156	Panthera_tigris_altaica
ENSMALG00000008014	sf3b3	100	93.180	ENSPTRG00000008308	SF3B3	100	93.180	Pan_troglodytes
ENSMALG00000008014	sf3b3	100	93.180	ENSPANG00000024075	SF3B3	100	93.180	Papio_anubis
ENSMALG00000008014	sf3b3	100	96.385	ENSPKIG00000002712	sf3b3	100	96.385	Paramormyrops_kingsleyae
ENSMALG00000008014	sf3b3	89	92.824	ENSPSIG00000002232	SF3B3	100	92.824	Pelodiscus_sinensis
ENSMALG00000008014	sf3b3	100	93.098	ENSPEMG00000008603	Sf3b3	100	93.098	Peromyscus_maniculatus_bairdii
ENSMALG00000008014	sf3b3	100	90.551	ENSPMAG00000001793	sf3b3	100	90.551	Petromyzon_marinus
ENSMALG00000008014	sf3b3	100	93.344	ENSPCIG00000014927	SF3B3	100	93.344	Phascolarctos_cinereus
ENSMALG00000008014	sf3b3	100	97.617	ENSPFOG00000015516	sf3b3	100	97.617	Poecilia_formosa
ENSMALG00000008014	sf3b3	100	97.617	ENSPLAG00000014330	sf3b3	100	97.617	Poecilia_latipinna
ENSMALG00000008014	sf3b3	100	97.699	ENSPMEG00000019856	sf3b3	100	97.699	Poecilia_mexicana
ENSMALG00000008014	sf3b3	81	97.358	ENSPREG00000019669	sf3b3	97	97.358	Poecilia_reticulata
ENSMALG00000008014	sf3b3	95	94.776	ENSPPYG00000007539	SF3B3	100	94.776	Pongo_abelii
ENSMALG00000008014	sf3b3	100	72.555	ENSPCAG00000002623	SF3B3	100	72.555	Procavia_capensis
ENSMALG00000008014	sf3b3	84	95.385	ENSPCOG00000026582	SF3B3	100	95.385	Propithecus_coquereli
ENSMALG00000008014	sf3b3	100	93.180	ENSPVAG00000000684	SF3B3	100	93.180	Pteropus_vampyrus
ENSMALG00000008014	sf3b3	100	97.946	ENSPNYG00000003528	sf3b3	100	97.946	Pundamilia_nyererei
ENSMALG00000008014	sf3b3	100	96.878	ENSPNAG00000015419	sf3b3	100	96.878	Pygocentrus_nattereri
ENSMALG00000008014	sf3b3	100	93.098	ENSRNOG00000017724	Sf3b3	100	93.098	Rattus_norvegicus
ENSMALG00000008014	sf3b3	100	93.180	ENSRBIG00000021904	SF3B3	100	93.180	Rhinopithecus_bieti
ENSMALG00000008014	sf3b3	100	93.180	ENSRROG00000045703	SF3B3	100	93.180	Rhinopithecus_roxellana
ENSMALG00000008014	sf3b3	100	93.180	ENSSBOG00000029156	SF3B3	100	93.180	Saimiri_boliviensis_boliviensis
ENSMALG00000008014	sf3b3	100	93.344	ENSSHAG00000000372	SF3B3	100	93.344	Sarcophilus_harrisii
ENSMALG00000008014	sf3b3	100	96.795	ENSSFOG00015012877	sf3b3	100	96.795	Scleropages_formosus
ENSMALG00000008014	sf3b3	100	97.124	ENSSMAG00000014386	sf3b3	100	97.124	Scophthalmus_maximus
ENSMALG00000008014	sf3b3	100	98.439	ENSSDUG00000021201	sf3b3	100	98.439	Seriola_dumerili
ENSMALG00000008014	sf3b3	100	98.357	ENSSLDG00000017532	sf3b3	100	98.357	Seriola_lalandi_dorsalis
ENSMALG00000008014	sf3b3	93	93.015	ENSSARG00000006917	SF3B3	93	93.015	Sorex_araneus
ENSMALG00000008014	sf3b3	100	93.016	ENSSPUG00000006253	SF3B3	100	93.016	Sphenodon_punctatus
ENSMALG00000008014	sf3b3	100	90.468	ENSSPAG00000003125	sf3b3	100	90.468	Stegastes_partitus
ENSMALG00000008014	sf3b3	100	93.262	ENSSSCG00000025323	SF3B3	100	93.262	Sus_scrofa
ENSMALG00000008014	sf3b3	100	93.103	ENSTGUG00000006082	SF3B3	100	93.103	Taeniopygia_guttata
ENSMALG00000008014	sf3b3	89	97.243	ENSTNIG00000004857	sf3b3	100	97.243	Tetraodon_nigroviridis
ENSMALG00000008014	sf3b3	93	79.137	ENSTBEG00000002946	SF3B3	100	79.137	Tupaia_belangeri
ENSMALG00000008014	sf3b3	100	92.440	ENSTTRG00000005855	SF3B3	100	92.440	Tursiops_truncatus
ENSMALG00000008014	sf3b3	100	93.262	ENSUAMG00000006780	SF3B3	100	93.262	Ursus_americanus
ENSMALG00000008014	sf3b3	100	93.262	ENSUMAG00000017757	SF3B3	100	93.262	Ursus_maritimus
ENSMALG00000008014	sf3b3	100	78.061	ENSVPAG00000003202	SF3B3	100	78.061	Vicugna_pacos
ENSMALG00000008014	sf3b3	100	93.262	ENSVVUG00000017922	SF3B3	100	93.262	Vulpes_vulpes
ENSMALG00000008014	sf3b3	100	93.509	ENSXETG00000032869	SF3B3	100	93.509	Xenopus_tropicalis
ENSMALG00000008014	sf3b3	77	97.877	ENSXCOG00000013628	sf3b3	97	97.877	Xiphophorus_couchianus
ENSMALG00000008014	sf3b3	100	97.617	ENSXMAG00000006334	sf3b3	100	97.617	Xiphophorus_maculatus