EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000011852	zf-C2H2	PF00096.26	4.5e-14	1	2
ENSMALP00000011852	zf-C2H2	PF00096.26	4.5e-14	2	2
ENSMALP00000011866	zf-C2H2	PF00096.26	8.4e-14	1	2
ENSMALP00000011866	zf-C2H2	PF00096.26	8.4e-14	2	2
ENSMALP00000011852	zf-met	PF12874.7	0.00018	1	2
ENSMALP00000011852	zf-met	PF12874.7	0.00018	2	2
ENSMALP00000011866	zf-met	PF12874.7	0.0003	1	2
ENSMALP00000011866	zf-met	PF12874.7	0.0003	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000012106	-	2796	-	ENSMALP00000011852	298 (aa)	-	-
ENSMALT00000012122	-	2909	XM_020624283	ENSMALP00000011866	341 (aa)	XP_020479939	UPI0009B3DCE8

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000008421	ovol1a	58	42.623	ENSMALG00000012043	-	92	42.623
ENSMALG00000008421	ovol1a	64	41.667	ENSMALG00000010369	-	90	41.667
ENSMALG00000008421	ovol1a	53	40.260	ENSMALG00000004413	-	94	40.260
ENSMALG00000008421	ovol1a	50	44.156	ENSMALG00000006887	-	88	44.156
ENSMALG00000008421	ovol1a	59	37.179	ENSMALG00000013321	-	73	37.179
ENSMALG00000008421	ovol1a	64	39.130	ENSMALG00000007051	-	94	43.210
ENSMALG00000008421	ovol1a	52	39.474	ENSMALG00000016121	-	50	39.474
ENSMALG00000008421	ovol1a	68	37.662	ENSMALG00000011969	-	72	37.662
ENSMALG00000008421	ovol1a	59	42.105	ENSMALG00000011992	-	77	45.455
ENSMALG00000008421	ovol1a	57	43.396	ENSMALG00000005239	-	88	40.260
ENSMALG00000008421	ovol1a	77	37.209	ENSMALG00000001010	-	96	37.209
ENSMALG00000008421	ovol1a	60	39.506	ENSMALG00000003975	-	91	39.506
ENSMALG00000008421	ovol1a	67	41.026	ENSMALG00000001487	-	87	41.026
ENSMALG00000008421	ovol1a	78	35.088	ENSMALG00000011756	-	81	35.088
ENSMALG00000008421	ovol1a	61	35.897	ENSMALG00000012155	-	82	36.522
ENSMALG00000008421	ovol1a	66	41.975	ENSMALG00000003906	-	79	41.975
ENSMALG00000008421	ovol1a	65	40.196	ENSMALG00000007812	-	89	40.196
ENSMALG00000008421	ovol1a	61	49.020	ENSMALG00000020889	-	61	37.255
ENSMALG00000008421	ovol1a	57	40.741	ENSMALG00000015655	-	90	40.741
ENSMALG00000008421	ovol1a	65	41.558	ENSMALG00000007403	-	79	41.558
ENSMALG00000008421	ovol1a	64	39.130	ENSMALG00000005554	-	87	39.130
ENSMALG00000008421	ovol1a	53	33.143	ENSMALG00000011860	-	53	33.143
ENSMALG00000008421	ovol1a	78	35.484	ENSMALG00000021318	snai2	96	35.484

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000008421	ovol1a	99	56.780	ENSAMXG00000011046	ovol1a	99	57.627	Astyanax_mexicanus
ENSMALG00000008421	ovol1a	98	41.420	ENSAMXG00000041879	ovol1b	98	41.420	Astyanax_mexicanus
ENSMALG00000008421	ovol1a	99	57.670	ENSDARG00000076472	ovol1a	100	57.670	Danio_rerio
ENSMALG00000008421	ovol1a	96	46.866	ENSDARG00000078256	ovol1b	99	46.866	Danio_rerio
ENSMALG00000008421	ovol1a	100	59.615	ENSELUG00000000343	ovol1a	100	59.615	Esox_lucius
ENSMALG00000008421	ovol1a	100	70.845	ENSFHEG00000002773	-	100	72.303	Fundulus_heteroclitus
ENSMALG00000008421	ovol1a	70	78.378	ENSGACG00000018794	ovol1a	88	78.673	Gasterosteus_aculeatus
ENSMALG00000008421	ovol1a	100	70.968	ENSHCOG00000015860	ovol1a	100	70.968	Hippocampus_comes
ENSMALG00000008421	ovol1a	100	73.977	ENSKMAG00000002605	-	100	75.439	Kryptolebias_marmoratus
ENSMALG00000008421	ovol1a	100	83.573	ENSMAMG00000009768	ovol1a	100	83.862	Mastacembelus_armatus
ENSMALG00000008421	ovol1a	100	56.571	ENSPKIG00000024718	ovol1a	100	57.143	Paramormyrops_kingsleyae
ENSMALG00000008421	ovol1a	100	73.333	ENSPFOG00000008841	-	100	100.000	Poecilia_formosa
ENSMALG00000008421	ovol1a	100	58.640	ENSPNAG00000020630	ovol1a	100	58.640	Pygocentrus_nattereri
ENSMALG00000008421	ovol1a	93	42.500	ENSPNAG00000016198	ovol1b	100	42.500	Pygocentrus_nattereri
ENSMALG00000008421	ovol1a	100	76.836	ENSSDUG00000009846	ovol1a	100	78.814	Seriola_dumerili
ENSMALG00000008421	ovol1a	76	56.828	ENSXCOG00000006461	-	77	57.269	Xiphophorus_couchianus