EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000008555 (Gene tree)
Gene ID: 109955789
Gene Symbol: lig4
Alias: zgc:165595
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 4835 bases
Position: chrKV884704.1:2877661-2882495
Accession: 109955789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000012046	RNA_ligase	PF09414.10	4.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000012303	-	4029	XM_020592265	ENSMALP00000012046	906 (aa)	XP_020447921	UPI0009B40C8C

Gene Model

Click here to download ENSMALG00000008555's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000008555's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000008555	lig4	99	66.224	ENSG00000174405	LIG4	100	66.706	Homo_sapiens
ENSMALG00000008555	lig4	100	89.341	ENSAPOG00000000866	lig4	100	89.341	Acanthochromis_polyacanthus
ENSMALG00000008555	lig4	99	63.925	ENSAMEG00000019685	LIG4	99	63.925	Ailuropoda_melanoleuca
ENSMALG00000008555	lig4	100	89.231	ENSACIG00000018309	lig4	100	89.231	Amphilophus_citrinellus
ENSMALG00000008555	lig4	100	89.121	ENSAOCG00000011768	lig4	100	89.121	Amphiprion_ocellaris
ENSMALG00000008555	lig4	100	89.341	ENSAPEG00000017815	lig4	100	89.341	Amphiprion_percula
ENSMALG00000008555	lig4	100	89.780	ENSATEG00000005583	lig4	100	89.780	Anabas_testudineus
ENSMALG00000008555	lig4	96	66.895	ENSAPLG00000001673	LIG4	99	66.895	Anas_platyrhynchos
ENSMALG00000008555	lig4	99	66.851	ENSACAG00000014566	LIG4	99	66.851	Anolis_carolinensis
ENSMALG00000008555	lig4	99	65.559	ENSANAG00000012446	LIG4	99	65.559	Aotus_nancymaae
ENSMALG00000008555	lig4	100	87.253	ENSACLG00000027051	lig4	100	87.253	Astatotilapia_calliptera
ENSMALG00000008555	lig4	100	79.303	ENSAMXG00000008192	lig4	95	79.303	Astyanax_mexicanus
ENSMALG00000008555	lig4	99	65.449	ENSBTAG00000015868	LIG4	99	65.449	Bos_taurus
ENSMALG00000008555	lig4	99	65.116	ENSCJAG00000014689	LIG4	99	65.116	Callithrix_jacchus
ENSMALG00000008555	lig4	99	64.895	ENSCAFG00000006031	LIG4	99	64.895	Canis_familiaris
ENSMALG00000008555	lig4	99	64.895	ENSCAFG00020021230	LIG4	99	64.895	Canis_lupus_dingo
ENSMALG00000008555	lig4	99	65.449	ENSCHIG00000001019	LIG4	99	65.449	Capra_hircus
ENSMALG00000008555	lig4	99	64.895	ENSCAPG00000006284	LIG4	99	64.895	Cavia_aperea
ENSMALG00000008555	lig4	99	64.784	ENSCPOG00000014266	LIG4	99	64.784	Cavia_porcellus
ENSMALG00000008555	lig4	99	65.781	ENSCCAG00000019971	LIG4	99	65.781	Cebus_capucinus
ENSMALG00000008555	lig4	99	65.708	ENSCATG00000021075	LIG4	99	65.708	Cercocebus_atys
ENSMALG00000008555	lig4	99	65.227	ENSCLAG00000003376	LIG4	99	65.227	Chinchilla_lanigera
ENSMALG00000008555	lig4	99	65.597	ENSCSAG00000000211	LIG4	99	65.597	Chlorocebus_sabaeus
ENSMALG00000008555	lig4	99	68.812	ENSCPBG00000023291	LIG4	100	68.162	Chrysemys_picta_bellii
ENSMALG00000008555	lig4	70	46.875	ENSCING00000009536	-	97	46.875	Ciona_intestinalis
ENSMALG00000008555	lig4	84	44.314	ENSCSAVG00000010336	-	99	44.314	Ciona_savignyi
ENSMALG00000008555	lig4	99	65.487	ENSCANG00000005805	LIG4	99	65.487	Colobus_angolensis_palliatus
ENSMALG00000008555	lig4	99	64.934	ENSCGRG00001012072	Lig4	99	64.934	Cricetulus_griseus_chok1gshd
ENSMALG00000008555	lig4	99	64.934	ENSCGRG00000013417	Lig4	99	64.934	Cricetulus_griseus_crigri
ENSMALG00000008555	lig4	97	85.118	ENSCSEG00000013905	lig4	96	85.118	Cynoglossus_semilaevis
ENSMALG00000008555	lig4	100	87.596	ENSCVAG00000007896	lig4	100	87.596	Cyprinodon_variegatus
ENSMALG00000008555	lig4	100	79.121	ENSDARG00000060620	lig4	100	79.121	Danio_rerio
ENSMALG00000008555	lig4	99	65.044	ENSDNOG00000000513	LIG4	99	65.044	Dasypus_novemcinctus
ENSMALG00000008555	lig4	99	65.891	ENSDORG00000027303	Lig4	99	65.891	Dipodomys_ordii
ENSMALG00000008555	lig4	98	30.150	FBgn0030506	Lig4	99	30.150	Drosophila_melanogaster
ENSMALG00000008555	lig4	98	62.749	ENSETEG00000015563	LIG4	100	62.971	Echinops_telfairi
ENSMALG00000008555	lig4	99	44.798	ENSEBUG00000014243	lig4	99	44.798	Eptatretus_burgeri
ENSMALG00000008555	lig4	99	64.784	ENSEASG00005022073	LIG4	99	64.784	Equus_asinus_asinus
ENSMALG00000008555	lig4	99	64.673	ENSECAG00000003257	LIG4	99	64.673	Equus_caballus
ENSMALG00000008555	lig4	99	83.040	ENSELUG00000006787	lig4	99	83.150	Esox_lucius
ENSMALG00000008555	lig4	99	64.341	ENSFCAG00000031985	LIG4	99	64.341	Felis_catus
ENSMALG00000008555	lig4	88	68.931	ENSFALG00000004214	LIG4	97	68.931	Ficedula_albicollis
ENSMALG00000008555	lig4	99	64.452	ENSFDAG00000008973	LIG4	99	64.452	Fukomys_damarensis
ENSMALG00000008555	lig4	100	87.486	ENSFHEG00000007398	lig4	91	87.486	Fundulus_heteroclitus
ENSMALG00000008555	lig4	85	78.295	ENSGMOG00000012843	lig4	99	78.295	Gadus_morhua
ENSMALG00000008555	lig4	99	65.967	ENSGALG00000016854	LIG4	99	65.967	Gallus_gallus
ENSMALG00000008555	lig4	99	86.469	ENSGAFG00000019779	lig4	96	86.909	Gambusia_affinis
ENSMALG00000008555	lig4	99	84.879	ENSGACG00000014135	lig4	99	84.879	Gasterosteus_aculeatus
ENSMALG00000008555	lig4	99	66.002	ENSGGOG00000027771	LIG4	99	66.002	Gorilla_gorilla
ENSMALG00000008555	lig4	100	87.033	ENSHBUG00000006245	lig4	100	87.033	Haplochromis_burtoni
ENSMALG00000008555	lig4	99	64.673	ENSHGLG00000000718	LIG4	99	64.673	Heterocephalus_glaber_female
ENSMALG00000008555	lig4	99	64.673	ENSHGLG00100003265	LIG4	99	64.673	Heterocephalus_glaber_male
ENSMALG00000008555	lig4	100	82.895	ENSHCOG00000012010	lig4	100	82.895	Hippocampus_comes
ENSMALG00000008555	lig4	100	78.352	ENSIPUG00000013748	lig4	100	78.352	Ictalurus_punctatus
ENSMALG00000008555	lig4	99	65.006	ENSSTOG00000024303	LIG4	99	65.006	Ictidomys_tridecemlineatus
ENSMALG00000008555	lig4	99	64.673	ENSJJAG00000006750	Lig4	99	64.673	Jaculus_jaculus
ENSMALG00000008555	lig4	100	84.945	ENSKMAG00000001149	lig4	100	84.945	Kryptolebias_marmoratus
ENSMALG00000008555	lig4	91	88.029	ENSLBEG00000014578	lig4	100	88.029	Labrus_bergylta
ENSMALG00000008555	lig4	100	67.434	ENSLACG00000003282	LIG4	100	67.434	Latimeria_chalumnae
ENSMALG00000008555	lig4	100	73.056	ENSLOCG00000008901	lig4	99	73.056	Lepisosteus_oculatus
ENSMALG00000008555	lig4	99	63.846	ENSLAFG00000031152	LIG4	99	63.846	Loxodonta_africana
ENSMALG00000008555	lig4	99	65.708	ENSMFAG00000037235	LIG4	99	65.708	Macaca_fascicularis
ENSMALG00000008555	lig4	99	65.819	ENSMMUG00000008874	LIG4	99	65.819	Macaca_mulatta
ENSMALG00000008555	lig4	99	65.708	ENSMNEG00000023575	LIG4	99	65.708	Macaca_nemestrina
ENSMALG00000008555	lig4	99	65.487	ENSMLEG00000026720	LIG4	99	65.487	Mandrillus_leucophaeus
ENSMALG00000008555	lig4	100	90.330	ENSMAMG00000008472	lig4	99	90.330	Mastacembelus_armatus
ENSMALG00000008555	lig4	100	87.143	ENSMZEG00005001855	lig4	100	87.143	Maylandia_zebra
ENSMALG00000008555	lig4	99	66.073	ENSMGAG00000015532	LIG4	99	66.073	Meleagris_gallopavo
ENSMALG00000008555	lig4	99	64.230	ENSMOCG00000019000	Lig4	99	64.230	Microtus_ochrogaster
ENSMALG00000008555	lig4	100	87.363	ENSMMOG00000004390	lig4	100	87.363	Mola_mola
ENSMALG00000008555	lig4	99	65.639	ENSMODG00000025064	LIG4	99	65.639	Monodelphis_domestica
ENSMALG00000008555	lig4	99	64.452	MGP_CAROLIEiJ_G0030809	Lig4	99	64.452	Mus_caroli
ENSMALG00000008555	lig4	99	64.452	ENSMUSG00000049717	Lig4	99	64.452	Mus_musculus
ENSMALG00000008555	lig4	99	64.563	MGP_PahariEiJ_G0021270	Lig4	99	64.563	Mus_pahari
ENSMALG00000008555	lig4	99	64.563	MGP_SPRETEiJ_G0031917	Lig4	99	64.563	Mus_spretus
ENSMALG00000008555	lig4	99	64.758	ENSMPUG00000018675	LIG4	99	64.758	Mustela_putorius_furo
ENSMALG00000008555	lig4	99	65.227	ENSMLUG00000001267	LIG4	99	65.227	Myotis_lucifugus
ENSMALG00000008555	lig4	99	65.227	ENSNGAG00000013258	Lig4	99	65.227	Nannospalax_galili
ENSMALG00000008555	lig4	100	87.253	ENSNBRG00000021252	lig4	100	87.253	Neolamprologus_brichardi
ENSMALG00000008555	lig4	99	65.449	ENSNLEG00000007888	LIG4	99	65.449	Nomascus_leucogenys
ENSMALG00000008555	lig4	99	64.009	ENSOPRG00000005765	LIG4	99	64.009	Ochotona_princeps
ENSMALG00000008555	lig4	99	64.712	ENSODEG00000019683	LIG4	99	64.712	Octodon_degus
ENSMALG00000008555	lig4	100	88.022	ENSONIG00000011969	lig4	99	88.022	Oreochromis_niloticus
ENSMALG00000008555	lig4	99	64.563	ENSOCUG00000015734	LIG4	99	64.563	Oryctolagus_cuniculus
ENSMALG00000008555	lig4	99	82.785	ENSORLG00000004041	lig4	99	83.114	Oryzias_latipes
ENSMALG00000008555	lig4	99	82.895	ENSORLG00020019607	lig4	99	83.224	Oryzias_latipes_hni
ENSMALG00000008555	lig4	99	82.785	ENSORLG00015017754	lig4	99	83.114	Oryzias_latipes_hsok
ENSMALG00000008555	lig4	76	88.501	ENSOMEG00000003459	lig4	99	88.501	Oryzias_melastigma
ENSMALG00000008555	lig4	98	65.632	ENSOGAG00000032120	LIG4	99	65.632	Otolemur_garnettii
ENSMALG00000008555	lig4	81	69.471	ENSOARG00000005590	LIG4	97	69.471	Ovis_aries
ENSMALG00000008555	lig4	99	65.891	ENSPPAG00000032998	LIG4	99	65.891	Pan_paniscus
ENSMALG00000008555	lig4	99	64.895	ENSPPRG00000017804	LIG4	99	64.895	Panthera_pardus
ENSMALG00000008555	lig4	99	64.784	ENSPTIG00000010051	LIG4	99	64.784	Panthera_tigris_altaica
ENSMALG00000008555	lig4	99	66.002	ENSPTRG00000006025	LIG4	99	66.002	Pan_troglodytes
ENSMALG00000008555	lig4	99	65.819	ENSPANG00000007562	LIG4	99	65.819	Papio_anubis
ENSMALG00000008555	lig4	100	77.363	ENSPKIG00000011645	lig4	99	77.363	Paramormyrops_kingsleyae
ENSMALG00000008555	lig4	99	68.252	ENSPSIG00000001504	LIG4	99	68.252	Pelodiscus_sinensis
ENSMALG00000008555	lig4	98	80.201	ENSPMGG00000013486	lig4	100	79.563	Periophthalmus_magnuspinnatus
ENSMALG00000008555	lig4	99	64.270	ENSPEMG00000000076	Lig4	99	64.270	Peromyscus_maniculatus_bairdii
ENSMALG00000008555	lig4	99	65.376	ENSPCIG00000021882	LIG4	99	65.376	Phascolarctos_cinereus
ENSMALG00000008555	lig4	100	87.775	ENSPFOG00000000797	lig4	100	88.216	Poecilia_formosa
ENSMALG00000008555	lig4	100	87.665	ENSPLAG00000001196	lig4	100	88.106	Poecilia_latipinna
ENSMALG00000008555	lig4	100	87.555	ENSPMEG00000021353	lig4	100	88.106	Poecilia_mexicana
ENSMALG00000008555	lig4	100	87.115	ENSPREG00000007323	lig4	100	87.555	Poecilia_reticulata
ENSMALG00000008555	lig4	99	65.338	ENSPPYG00000005540	LIG4	99	65.338	Pongo_abelii
ENSMALG00000008555	lig4	99	64.784	ENSPVAG00000016403	LIG4	99	64.784	Pteropus_vampyrus
ENSMALG00000008555	lig4	100	87.253	ENSPNYG00000009660	lig4	100	87.253	Pundamilia_nyererei
ENSMALG00000008555	lig4	99	81.828	ENSPNAG00000028056	lig4	99	81.828	Pygocentrus_nattereri
ENSMALG00000008555	lig4	99	81.828	ENSPNAG00000028069	LIG4	99	81.828	Pygocentrus_nattereri
ENSMALG00000008555	lig4	99	64.120	ENSRNOG00000014605	Lig4	99	64.120	Rattus_norvegicus
ENSMALG00000008555	lig4	99	64.673	ENSRBIG00000039962	LIG4	99	64.673	Rhinopithecus_bieti
ENSMALG00000008555	lig4	99	65.559	ENSRROG00000006040	LIG4	99	65.559	Rhinopithecus_roxellana
ENSMALG00000008555	lig4	99	65.227	ENSSBOG00000019029	LIG4	99	65.227	Saimiri_boliviensis_boliviensis
ENSMALG00000008555	lig4	99	62.942	ENSSHAG00000009525	LIG4	99	63.274	Sarcophilus_harrisii
ENSMALG00000008555	lig4	100	79.231	ENSSFOG00015012835	lig4	100	79.231	Scleropages_formosus
ENSMALG00000008555	lig4	100	84.176	ENSSMAG00000011267	lig4	100	84.176	Scophthalmus_maximus
ENSMALG00000008555	lig4	100	88.293	ENSSDUG00000010343	lig4	100	88.293	Seriola_dumerili
ENSMALG00000008555	lig4	100	87.199	ENSSLDG00000003239	lig4	100	87.199	Seriola_lalandi_dorsalis
ENSMALG00000008555	lig4	99	63.837	ENSSARG00000006573	LIG4	99	63.837	Sorex_araneus
ENSMALG00000008555	lig4	92	69.359	ENSSPUG00000002444	LIG4	100	69.359	Sphenodon_punctatus
ENSMALG00000008555	lig4	100	88.571	ENSSPAG00000001609	lig4	100	88.571	Stegastes_partitus
ENSMALG00000008555	lig4	99	65.078	ENSSSCG00000009540	LIG4	99	65.078	Sus_scrofa
ENSMALG00000008555	lig4	99	66.296	ENSTGUG00000010795	LIG4	99	66.296	Taeniopygia_guttata
ENSMALG00000008555	lig4	100	86.154	ENSTRUG00000009984	lig4	100	86.154	Takifugu_rubripes
ENSMALG00000008555	lig4	100	82.437	ENSTNIG00000010348	lig4	100	82.656	Tetraodon_nigroviridis
ENSMALG00000008555	lig4	99	65.227	ENSTBEG00000017741	LIG4	99	65.227	Tupaia_belangeri
ENSMALG00000008555	lig4	99	64.452	ENSTTRG00000012660	LIG4	99	64.452	Tursiops_truncatus
ENSMALG00000008555	lig4	99	63.767	ENSUAMG00000003773	LIG4	99	63.767	Ursus_americanus
ENSMALG00000008555	lig4	100	66.776	ENSXETG00000002654	lig4	100	66.776	Xenopus_tropicalis
ENSMALG00000008555	lig4	100	87.885	ENSXCOG00000017401	lig4	100	87.885	Xiphophorus_couchianus
ENSMALG00000008555	lig4	100	87.445	ENSXMAG00000015142	lig4	99	87.445	Xiphophorus_maculatus