EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMALG00000008716 (Gene tree)
Gene ID
109951387
Gene Symbol
polr2a
Alias
im:7136071
Full Name
DNA-directed RNA polymerase II subunit RPB1-like
Gene Type
protein_coding
Species
Monopterus_albus
Status
putative
Strand
Minus strand
Length
11395 bases
Position
chrKV885072.1:126534-137928
Accession
109951387
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMALP00000012401RNA_pol_Rpb1_5PF04998.174.1e-10211
ENSMALP00000012348RNA_pol_Rpb1_5PF04998.175.1e-10211
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-18135
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-18235
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-18335
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-18435
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-18535
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-18635
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-18735
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-18835
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-18935
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-181035
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-181135
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-181235
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-181335
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-181435
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-181535
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-181635
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-181735
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-181835
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-181935
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-182035
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-182135
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-182235
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-182335
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-182435
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-182535
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-182635
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-182735
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-182835
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-182935
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-183035
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-183135
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-183235
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-183335
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-183435
ENSMALP00000012348RNA_pol_Rpb1_RPF05001.139.7e-183535
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-16125
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-16225
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-16325
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-16425
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-16525
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-16625
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-16725
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-16825
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-16925
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-161025
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-161125
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-161225
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-161325
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-161425
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-161525
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-161625
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-161725
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-161825
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-161925
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-162025
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-162125
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-162225
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-162325
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-162425
ENSMALP00000012401RNA_pol_Rpb1_RPF05001.131.1e-162525
ENSMALP00000012401RNA_pol_Rpb1_4PF05000.171.1e-3711
ENSMALP00000012348RNA_pol_Rpb1_4PF05000.171.2e-3711
ENSMALP00000012401RNA_pol_Rpb1_2PF00623.201.1e-7411
ENSMALP00000012348RNA_pol_Rpb1_2PF00623.201.3e-7411
ENSMALP00000012401RNA_pol_Rpb1_3PF04983.182.4e-5011
ENSMALP00000012348RNA_pol_Rpb1_3PF04983.182.9e-5011
ENSMALP00000012401RNA_pol_Rpb1_1PF04997.123.9e-10911
ENSMALP00000012348RNA_pol_Rpb1_1PF04997.124.2e-10911
ENSMALP00000012401RNA_pol_Rpb1_7PF04990.125.8e-5511
ENSMALP00000012348RNA_pol_Rpb1_7PF04990.126.3e-5511
ENSMALP00000012401RNA_pol_Rpb1_6PF04992.141.7e-6811
ENSMALP00000012348RNA_pol_Rpb1_6PF04992.142e-6811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMALT00000012668-5502-ENSMALP000000124011833 (aa)--
ENSMALT00000012609-6666XM_020585866ENSMALP000000123481973 (aa)XP_020441522-
Gene Model
Click here to download ENSMALG00000008716's gene model file
Pathways
Pathway IDPathway NameSource
malb03020RNA polymeraseKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000008716's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMALG00000008716polr2a6132.082ENSMALG00000013363polr1a7131.867
ENSMALG00000008716polr2a7137.874ENSMALG00000001249polr3a9137.874
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMALG00000008716polr2a8696.464ENSAPOG00000006552polr2a9195.849Acanthochromis_polyacanthus
ENSMALG00000008716polr2a9992.007ENSAMEG00000016265-9491.291Ailuropoda_melanoleuca
ENSMALG00000008716polr2a9998.475ENSACIG00000015982polr2a9196.097Amphilophus_citrinellus
ENSMALG00000008716polr2a8698.856ENSAOCG00000004255polr2a10095.497Amphiprion_ocellaris
ENSMALG00000008716polr2a9998.856ENSAPEG00000012623polr2a9495.849Amphiprion_percula
ENSMALG00000008716polr2a9998.602ENSATEG00000019644polr2a9495.601Anabas_testudineus
ENSMALG00000008716polr2a9992.547ENSACAG00000014561POLR2A9491.950Anolis_carolinensis
ENSMALG00000008716polr2a9994.660ENSANAG00000020093-9491.708Aotus_nancymaae
ENSMALG00000008716polr2a9998.285ENSACLG00000006735polr2a9298.327Astatotilapia_calliptera
ENSMALG00000008716polr2a9997.332ENSAMXG00000020046polr2a9494.362Astyanax_mexicanus
ENSMALG00000008716polr2a9492.365ENSBTAG00000046765POLR2A9491.708Bos_taurus
ENSMALG00000008716polr2a9970.006WBGene00000123ama-19481.081Caenorhabditis_elegans
ENSMALG00000008716polr2a9992.303ENSCAFG00000016532POLR2A9794.369Canis_familiaris
ENSMALG00000008716polr2a9993.897ENSCAFG00020007929-9193.853Canis_lupus_dingo
ENSMALG00000008716polr2a9492.365ENSCHIG00000027173-9491.708Capra_hircus
ENSMALG00000008716polr2a9994.660ENSTSYG00000012803-9194.613Carlito_syrichta
ENSMALG00000008716polr2a9591.051ENSCAPG00000001882-9893.502Cavia_aperea
ENSMALG00000008716polr2a9989.076ENSCPOG00000014812-9893.255Cavia_porcellus
ENSMALG00000008716polr2a9994.660ENSCCAG00000020938-9491.708Cebus_capucinus
ENSMALG00000008716polr2a9993.897ENSCATG00000013680-9491.646Cercocebus_atys
ENSMALG00000008716polr2a9994.533ENSCLAG00000012196-9491.584Chinchilla_lanigera
ENSMALG00000008716polr2a9983.529ENSCSAG00000011644-9482.903Chlorocebus_sabaeus
ENSMALG00000008716polr2a9388.758ENSCPBG00000012697POLR2A9985.834Chrysemys_picta_bellii
ENSMALG00000008716polr2a9277.096ENSCING00000007884-9976.332Ciona_intestinalis
ENSMALG00000008716polr2a9575.262ENSCSAVG00000008334-9881.081Ciona_savignyi
ENSMALG00000008716polr2a9993.014ENSCANG00000010622-9292.974Colobus_angolensis_palliatus
ENSMALG00000008716polr2a9988.896ENSCGRG00001003538Polr2a9388.868Cricetulus_griseus_chok1gshd
ENSMALG00000008716polr2a8690.954ENSCGRG00000012105Polr2a9390.920Cricetulus_griseus_crigri
ENSMALG00000008716polr2a9497.332ENSCSEG00000002635polr2a9494.362Cynoglossus_semilaevis
ENSMALG00000008716polr2a9995.720ENSCVAG00000005156polr2a9395.105Cyprinodon_variegatus
ENSMALG00000008716polr2a9994.482ENSDARG00000099966polr2a9593.870Danio_rerio
ENSMALG00000008716polr2a9989.385ENSDNOG00000016482-9488.116Dasypus_novemcinctus
ENSMALG00000008716polr2a9994.660ENSDORG00000008667Polr2a9491.708Dipodomys_ordii
ENSMALG00000008716polr2a9968.438FBgn0003277RpII2159874.332Drosophila_melanogaster
ENSMALG00000008716polr2a9189.756ENSETEG00000002540-8790.948Echinops_telfairi
ENSMALG00000008716polr2a8885.340ENSEBUG00000013967polr2a9287.221Eptatretus_burgeri
ENSMALG00000008716polr2a9992.562ENSEASG00005019114-9192.522Equus_asinus_asinus
ENSMALG00000008716polr2a9992.365ENSECAG00000018485POLR2A9491.708Equus_caballus
ENSMALG00000008716polr2a8994.393ENSEEUG00000001154-9594.393Erinaceus_europaeus
ENSMALG00000008716polr2a9192.417ENSELUG00000014284polr2a9393.103Esox_lucius
ENSMALG00000008716polr2a9994.006ENSFDAG00000008287-9293.962Fukomys_damarensis
ENSMALG00000008716polr2a9797.585ENSFHEG00000001768polr2a9997.585Fundulus_heteroclitus
ENSMALG00000008716polr2a99100.000ENSGMOG00000007725polr2a100100.000Gadus_morhua
ENSMALG00000008716polr2a9798.333ENSGAFG00000005389polr2a10093.235Gambusia_affinis
ENSMALG00000008716polr2a9694.217ENSGACG00000019366polr2a10093.652Gasterosteus_aculeatus
ENSMALG00000008716polr2a9991.804ENSGGOG00000014800-9692.893Gorilla_gorilla
ENSMALG00000008716polr2a9797.953ENSHBUG00000018937polr2a9997.953Haplochromis_burtoni
ENSMALG00000008716polr2a9994.723ENSHGLG00000012381POLR2A9491.770Heterocephalus_glaber_female
ENSMALG00000008716polr2a9994.723ENSHGLG00100014843POLR2A9491.770Heterocephalus_glaber_male
ENSMALG00000008716polr2a9995.161ENSHCOG00000011874polr2a9494.548Hippocampus_comes
ENSMALG00000008716polr2a9997.205ENSIPUG00000002613Polr2a9494.238Ictalurus_punctatus
ENSMALG00000008716polr2a9994.660ENSSTOG00000001304-9491.708Ictidomys_tridecemlineatus
ENSMALG00000008716polr2a9994.660ENSJJAG00000013049Polr2a9491.708Jaculus_jaculus
ENSMALG00000008716polr2a8696.154ENSKMAG00000016343polr2a8696.154Kryptolebias_marmoratus
ENSMALG00000008716polr2a9498.158ENSLBEG00000027652polr2a9495.167Labrus_bergylta
ENSMALG00000008716polr2a9783.365ENSLACG00000012071POLR2A8785.426Latimeria_chalumnae
ENSMALG00000008716polr2a9296.723ENSLOCG00000013863polr2a9296.221Lepisosteus_oculatus
ENSMALG00000008716polr2a9992.365ENSLAFG00000008626-9594.431Loxodonta_africana
ENSMALG00000008716polr2a5393.054ENSMFAG00000007042-9993.054Macaca_fascicularis
ENSMALG00000008716polr2a9994.596ENSMMUG00000023620-9494.369Macaca_mulatta
ENSMALG00000008716polr2a9994.151ENSMNEG00000040407-9794.106Macaca_nemestrina
ENSMALG00000008716polr2a9790.143ENSMLEG00000030263-9993.054Mandrillus_leucophaeus
ENSMALG00000008716polr2a9996.216ENSMAMG00000003351polr2a9495.601Mastacembelus_armatus
ENSMALG00000008716polr2a9997.205ENSMZEG00005021429polr2a9298.327Maylandia_zebra
ENSMALG00000008716polr2a5494.292ENSMAUG00000021055-9994.292Mesocricetus_auratus
ENSMALG00000008716polr2a9993.710ENSMICG00000013372-9893.552Microcebus_murinus
ENSMALG00000008716polr2a9991.786ENSMOCG00000018279Polr2a9790.130Microtus_ochrogaster
ENSMALG00000008716polr2a8695.347ENSMMOG00000012515polr2a9094.734Mola_mola
ENSMALG00000008716polr2a9991.993ENSMODG00000007009-9491.337Monodelphis_domestica
ENSMALG00000008716polr2a9894.660MGP_CAROLIEiJ_G0016587Polr2a9491.708Mus_caroli
ENSMALG00000008716polr2a9894.660ENSMUSG00000005198Polr2a9491.708Mus_musculus
ENSMALG00000008716polr2a9990.235MGP_PahariEiJ_G0017718Polr2a9489.587Mus_pahari
ENSMALG00000008716polr2a9894.660MGP_SPRETEiJ_G0017423Polr2a9491.708Mus_spretus
ENSMALG00000008716polr2a9992.365ENSMPUG00000009648-9491.708Mustela_putorius_furo
ENSMALG00000008716polr2a9991.754ENSMLUG00000009088-9491.100Myotis_lucifugus
ENSMALG00000008716polr2a9994.660ENSNGAG00000002543Polr2a9491.708Nannospalax_galili
ENSMALG00000008716polr2a9998.348ENSNBRG00000002005polr2a9195.973Neolamprologus_brichardi
ENSMALG00000008716polr2a9994.660ENSNLEG00000009460-9194.613Nomascus_leucogenys
ENSMALG00000008716polr2a9295.207ENSMEUG00000008611-9186.710Notamacropus_eugenii
ENSMALG00000008716polr2a8492.040ENSOPRG00000015116-9994.188Ochotona_princeps
ENSMALG00000008716polr2a9593.063ENSODEG00000017674-9490.074Octodon_degus
ENSMALG00000008716polr2a9996.216ENSONIG00000009231polr2a9298.637Oreochromis_niloticus
ENSMALG00000008716polr2a5193.777ENSOANG00000003303-9893.676Ornithorhynchus_anatinus
ENSMALG00000008716polr2a9793.256ENSOCUG00000017929-9894.358Oryctolagus_cuniculus
ENSMALG00000008716polr2a9997.840ENSORLG00000006431polr2a9197.831Oryzias_latipes
ENSMALG00000008716polr2a9997.840ENSORLG00020010235polr2a9197.831Oryzias_latipes_hni
ENSMALG00000008716polr2a9997.713ENSORLG00015007075polr2a9197.708Oryzias_latipes_hsok
ENSMALG00000008716polr2a9398.118ENSOMEG00000010713polr2a10097.884Oryzias_melastigma
ENSMALG00000008716polr2a9992.365ENSOGAG00000033608-9491.708Otolemur_garnettii
ENSMALG00000008716polr2a8694.475ENSOARG00000013874-9491.708Ovis_aries
ENSMALG00000008716polr2a9794.562ENSPPAG00000043734-8894.106Pan_paniscus
ENSMALG00000008716polr2a9994.660ENSPTRG00000008691POLR2A9194.613Pan_troglodytes
ENSMALG00000008716polr2a9993.897ENSPANG00000024099-9490.965Papio_anubis
ENSMALG00000008716polr2a8195.568ENSPKIG00000005727polr2a8595.568Paramormyrops_kingsleyae
ENSMALG00000008716polr2a9592.019ENSPSIG00000014006POLR2A9992.641Pelodiscus_sinensis
ENSMALG00000008716polr2a10097.447ENSPMGG00000019734polr2a10097.447Periophthalmus_magnuspinnatus
ENSMALG00000008716polr2a9994.660ENSPEMG00000012521Polr2a9491.708Peromyscus_maniculatus_bairdii
ENSMALG00000008716polr2a8494.169ENSPCIG00000028851-8294.169Phascolarctos_cinereus
ENSMALG00000008716polr2a9697.999ENSPFOG00000007890polr2a9997.999Poecilia_formosa
ENSMALG00000008716polr2a9697.999ENSPLAG00000007399polr2a9997.999Poecilia_latipinna
ENSMALG00000008716polr2a9697.999ENSPMEG00000002071polr2a9997.999Poecilia_mexicana
ENSMALG00000008716polr2a9998.094ENSPREG00000013122polr2a9395.105Poecilia_reticulata
ENSMALG00000008716polr2a9892.365ENSPPYG00000007924-9594.431Pongo_abelii
ENSMALG00000008716polr2a9095.263ENSPCAG00000006951-8695.263Procavia_capensis
ENSMALG00000008716polr2a9994.660ENSPCOG00000025260-9194.613Propithecus_coquereli
ENSMALG00000008716polr2a9992.055ENSPVAG00000005069-9491.399Pteropus_vampyrus
ENSMALG00000008716polr2a9995.844ENSPNYG00000022340polr2a9298.265Pundamilia_nyererei
ENSMALG00000008716polr2a9995.037ENSPNAG00000011237polr2a9494.424Pygocentrus_nattereri
ENSMALG00000008716polr2a9992.303ENSRNOG00000028834Polr2a9491.646Rattus_norvegicus
ENSMALG00000008716polr2a9894.596ENSRBIG00000002471-9293.998Rhinopithecus_bieti
ENSMALG00000008716polr2a9992.303ENSRROG00000029583-9491.646Rhinopithecus_roxellana
ENSMALG00000008716polr2a8650.753YDL140CRPO219777.273Saccharomyces_cerevisiae
ENSMALG00000008716polr2a9994.660ENSSBOG00000000808-9491.708Saimiri_boliviensis_boliviensis
ENSMALG00000008716polr2a9991.993ENSSHAG00000002858-9091.337Sarcophilus_harrisii
ENSMALG00000008716polr2a9497.459ENSSFOG00015023275polr2a9494.486Scleropages_formosus
ENSMALG00000008716polr2a9995.658ENSSMAG00000009137polr2a9198.017Scophthalmus_maximus
ENSMALG00000008716polr2a9998.856ENSSDUG00000020466polr2a9495.849Seriola_dumerili
ENSMALG00000008716polr2a9998.793ENSSLDG00000020613polr2a9495.787Seriola_lalandi_dorsalis
ENSMALG00000008716polr2a9589.952ENSSARG00000005875-9990.847Sorex_araneus
ENSMALG00000008716polr2a10096.365ENSSPAG00000016741polr2a9498.689Stegastes_partitus
ENSMALG00000008716polr2a9991.434ENSSSCG00000028278-9490.780Sus_scrofa
ENSMALG00000008716polr2a9692.374ENSTRUG00000012320polr2a8192.384Takifugu_rubripes
ENSMALG00000008716polr2a9596.712ENSTNIG00000010136polr2a10096.716Tetraodon_nigroviridis
ENSMALG00000008716polr2a7593.955ENSTBEG00000013294-5893.955Tupaia_belangeri
ENSMALG00000008716polr2a9990.689ENSTTRG00000014273-9490.037Tursiops_truncatus
ENSMALG00000008716polr2a9394.230ENSUAMG00000014866-9994.012Ursus_americanus
ENSMALG00000008716polr2a9192.179ENSUMAG00000015732-9192.179Ursus_maritimus
ENSMALG00000008716polr2a6398.370ENSVPAG00000008842-7698.370Vicugna_pacos
ENSMALG00000008716polr2a9694.413ENSVVUG00000027878-9789.737Vulpes_vulpes
ENSMALG00000008716polr2a9194.084ENSXETG00000012465polr2a9194.040Xenopus_tropicalis
ENSMALG00000008716polr2a10095.526ENSXCOG00000001804polr2a10095.526Xiphophorus_couchianus
ENSMALG00000008716polr2a9998.094ENSXMAG00000015687polr2a9395.105Xiphophorus_maculatus

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