EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000008842 (Gene tree)
Gene ID: 109954939
Gene Symbol: -
Alias: -
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 16990 bases
Position: chrKV884690.1:4811543-4828532
Accession: 109954939
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000012467	RRM_1	PF00076.22	1.2e-24	1	1
ENSMALP00000012452	RRM_1	PF00076.22	1.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000012719	-	5109	XM_020590630	ENSMALP00000012452	503 (aa)	XP_020446286	UPI0009B2FD47
ENSMALT00000012734	-	5049	XM_020590648	ENSMALP00000012467	483 (aa)	XP_020446304	UPI0009B30711

Gene Model

Click here to download ENSMALG00000008842's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000008842's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000008842	-	97	55.987	ENSG00000177613	CSTF2T	81	83.111	Homo_sapiens
ENSMALG00000008842	-	57	60.563	ENSANAG00000027508	-	65	64.032	Aotus_nancymaae
ENSMALG00000008842	-	96	88.462	ENSBTAG00000018406	CSTF2T	75	74.627	Bos_taurus
ENSMALG00000008842	-	56	58.865	ENSCJAG00000011554	-	71	64.032	Callithrix_jacchus
ENSMALG00000008842	-	61	53.172	ENSCJAG00000039083	-	69	61.847	Callithrix_jacchus
ENSMALG00000008842	-	96	83.636	ENSCAFG00000015567	CSTF2T	98	63.389	Canis_familiaris
ENSMALG00000008842	-	52	87.374	ENSCAFG00020026426	CSTF2T	68	86.792	Canis_lupus_dingo
ENSMALG00000008842	-	97	53.268	ENSCHIG00000016590	CSTF2T	75	86.792	Capra_hircus
ENSMALG00000008842	-	98	54.823	ENSTSYG00000007750	CSTF2T	84	83.333	Carlito_syrichta
ENSMALG00000008842	-	58	55.015	ENSCCAG00000020816	-	64	63.529	Cebus_capucinus
ENSMALG00000008842	-	58	56.535	ENSCATG00000041868	-	56	68.444	Cercocebus_atys
ENSMALG00000008842	-	97	54.331	ENSCSAG00000018437	CSTF2T	80	83.111	Chlorocebus_sabaeus
ENSMALG00000008842	-	97	73.747	ENSCSEG00000002596	-	95	72.400	Cynoglossus_semilaevis
ENSMALG00000008842	-	98	51.396	ENSDNOG00000003283	CSTF2T	99	50.492	Dasypus_novemcinctus
ENSMALG00000008842	-	97	79.032	ENSDORG00000011245	Cstf2t	51	76.680	Dipodomys_ordii
ENSMALG00000008842	-	97	51.875	ENSEBUG00000014295	CSTF2T	98	51.148	Eptatretus_burgeri
ENSMALG00000008842	-	97	53.635	ENSEASG00005012929	CSTF2T	78	74.627	Equus_asinus_asinus
ENSMALG00000008842	-	97	53.760	ENSECAG00000004701	CSTF2T	79	78.776	Equus_caballus
ENSMALG00000008842	-	100	79.020	ENSELUG00000004079	-	98	80.522	Esox_lucius
ENSMALG00000008842	-	97	55.089	ENSFCAG00000046300	CSTF2T	74	83.111	Felis_catus
ENSMALG00000008842	-	51	83.636	ENSFDAG00000021170	CSTF2T	71	86.792	Fukomys_damarensis
ENSMALG00000008842	-	97	56.486	ENSGGOG00000036416	-	83	83.111	Gorilla_gorilla
ENSMALG00000008842	-	97	56.486	ENSGGOG00000042388	-	83	83.111	Gorilla_gorilla
ENSMALG00000008842	-	95	72.222	ENSJJAG00000019881	Cstf2t	80	86.792	Jaculus_jaculus
ENSMALG00000008842	-	97	59.963	ENSLAFG00000002058	CSTF2T	99	58.318	Loxodonta_africana
ENSMALG00000008842	-	53	60.279	ENSMFAG00000042009	-	59	68.444	Macaca_fascicularis
ENSMALG00000008842	-	58	56.061	ENSMMUG00000042906	-	58	68.000	Macaca_mulatta
ENSMALG00000008842	-	53	60.279	ENSMNEG00000031410	-	59	68.444	Macaca_nemestrina
ENSMALG00000008842	-	98	54.575	ENSMAUG00000006359	Cstf2t	63	81.624	Mesocricetus_auratus
ENSMALG00000008842	-	81	90.909	ENSMICG00000000867	-	82	83.111	Microcebus_murinus
ENSMALG00000008842	-	98	71.429	ENSMICG00000030551	-	80	83.111	Microcebus_murinus
ENSMALG00000008842	-	98	53.145	ENSMOCG00000020428	Cstf2t	52	75.096	Microtus_ochrogaster
ENSMALG00000008842	-	98	79.032	MGP_CAROLIEiJ_G0022872	Cstf2t	50	86.792	Mus_caroli
ENSMALG00000008842	-	98	79.032	ENSMUSG00000053536	Cstf2t	52	75.769	Mus_musculus
ENSMALG00000008842	-	53	90.909	MGP_PahariEiJ_G0014365	Cstf2t	53	90.863	Mus_pahari
ENSMALG00000008842	-	98	79.032	MGP_SPRETEiJ_G0023790	Cstf2t	51	75.769	Mus_spretus
ENSMALG00000008842	-	97	54.870	ENSMPUG00000020141	CSTF2T	82	83.111	Mustela_putorius_furo
ENSMALG00000008842	-	97	53.255	ENSMLUG00000027140	-	87	71.937	Myotis_lucifugus
ENSMALG00000008842	-	97	85.455	ENSMLUG00000011187	-	74	85.455	Myotis_lucifugus
ENSMALG00000008842	-	97	53.560	ENSNLEG00000012025	CSTF2T	82	77.434	Nomascus_leucogenys
ENSMALG00000008842	-	97	57.119	ENSODEG00000012386	CSTF2T	74	91.327	Octodon_degus
ENSMALG00000008842	-	98	55.941	ENSOGAG00000014565	CSTF2T	90	79.032	Otolemur_garnettii
ENSMALG00000008842	-	96	88.462	ENSOARG00000013688	-	75	74.627	Ovis_aries
ENSMALG00000008842	-	97	65.882	ENSOARG00000019124	-	74	86.792	Ovis_aries
ENSMALG00000008842	-	97	55.267	ENSPPRG00000018659	CSTF2T	75	82.743	Panthera_pardus
ENSMALG00000008842	-	97	54.870	ENSPTIG00000021145	CSTF2T	83	82.743	Panthera_tigris_altaica
ENSMALG00000008842	-	53	60.279	ENSPANG00000029734	-	59	68.444	Papio_anubis
ENSMALG00000008842	-	97	98.529	ENSPFOG00000016756	CSTF2T	94	91.246	Poecilia_formosa
ENSMALG00000008842	-	97	53.822	ENSPPYG00000002441	CSTF2T	67	86.792	Pongo_abelii
ENSMALG00000008842	-	98	56.098	ENSPCOG00000010982	CSTF2T	84	82.743	Propithecus_coquereli
ENSMALG00000008842	-	98	54.735	ENSPVAG00000006274	CSTF2T	79	90.863	Pteropus_vampyrus
ENSMALG00000008842	-	98	52.987	ENSRNOG00000050289	Cstf2t	54	90.863	Rattus_norvegicus
ENSMALG00000008842	-	97	56.770	ENSRBIG00000029324	CSTF2T	83	83.111	Rhinopithecus_bieti
ENSMALG00000008842	-	97	56.607	ENSRROG00000042507	CSTF2T	83	83.111	Rhinopithecus_roxellana
ENSMALG00000008842	-	98	54.634	ENSSBOG00000022638	CSTF2T	87	77.778	Saimiri_boliviensis_boliviensis
ENSMALG00000008842	-	98	95.551	ENSSDUG00000001049	-	96	95.551	Seriola_dumerili
ENSMALG00000008842	-	98	95.551	ENSSLDG00000010056	-	96	95.551	Seriola_lalandi_dorsalis
ENSMALG00000008842	-	82	90.404	ENSSARG00000002013	-	58	90.816	Sorex_araneus
ENSMALG00000008842	-	98	93.008	ENSSPAG00000009247	-	96	93.008	Stegastes_partitus
ENSMALG00000008842	-	97	54.984	ENSSSCG00000010430	CSTF2T	80	83.111	Sus_scrofa
ENSMALG00000008842	-	98	87.110	ENSTRUG00000004323	-	96	84.615	Takifugu_rubripes
ENSMALG00000008842	-	98	46.440	ENSTBEG00000014379	CSTF2T	64	86.792	Tupaia_belangeri
ENSMALG00000008842	-	97	54.443	ENSTTRG00000003341	CSTF2T	51	79.592	Tursiops_truncatus
ENSMALG00000008842	-	69	87.310	ENSVVUG00000002575	CSTF2T	98	56.627	Vulpes_vulpes