EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000008861 (Gene tree)
Gene ID: 109965545
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 12396 bases
Position: chrKV884788.1:292666-305061
Accession: 109965545
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000012500	zf-RanBP	PF00641.18	2.1e-06	1	1
ENSMALP00000012523	zf-RanBP	PF00641.18	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000012767	-	4705	XM_020609630	ENSMALP00000012500	711 (aa)	XP_020465286	-
ENSMALT00000012790	-	2157	-	ENSMALP00000012523	718 (aa)	-	-

Gene Model

Click here to download ENSMALG00000008861's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb04217	Necroptosis	KEGG
malb04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000008861's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000008861	shrprbck1r	95	84.018	ENSAPOG00000022737	shrprbck1r	95	84.018	Acanthochromis_polyacanthus
ENSMALG00000008861	shrprbck1r	55	59.698	ENSAPOG00000023352	sharpin	88	59.698	Acanthochromis_polyacanthus
ENSMALG00000008861	shrprbck1r	95	82.769	ENSACIG00000002184	shrprbck1r	95	82.769	Amphilophus_citrinellus
ENSMALG00000008861	shrprbck1r	55	59.848	ENSAOCG00000017464	sharpin	88	59.848	Amphiprion_ocellaris
ENSMALG00000008861	shrprbck1r	95	85.903	ENSAOCG00000002890	shrprbck1r	96	85.903	Amphiprion_ocellaris
ENSMALG00000008861	shrprbck1r	55	59.848	ENSAPEG00000004049	sharpin	88	59.848	Amphiprion_percula
ENSMALG00000008861	shrprbck1r	96	83.019	ENSAPEG00000023274	shrprbck1r	95	83.455	Amphiprion_percula
ENSMALG00000008861	shrprbck1r	95	84.956	ENSATEG00000014561	shrprbck1r	95	84.956	Anabas_testudineus
ENSMALG00000008861	shrprbck1r	55	60.606	ENSATEG00000007832	sharpin	81	60.606	Anabas_testudineus
ENSMALG00000008861	shrprbck1r	95	82.916	ENSACLG00000022609	shrprbck1r	95	82.916	Astatotilapia_calliptera
ENSMALG00000008861	shrprbck1r	55	57.143	ENSAMXG00000006229	sharpin	97	57.143	Astyanax_mexicanus
ENSMALG00000008861	shrprbck1r	95	71.388	ENSAMXG00000021016	shrprbck1r	96	71.633	Astyanax_mexicanus
ENSMALG00000008861	shrprbck1r	96	77.471	ENSCSEG00000011306	shrprbck1r	95	77.794	Cynoglossus_semilaevis
ENSMALG00000008861	shrprbck1r	55	56.927	ENSCVAG00000006586	sharpin	88	56.927	Cyprinodon_variegatus
ENSMALG00000008861	shrprbck1r	95	80.412	ENSCVAG00000007250	shrprbck1r	96	80.412	Cyprinodon_variegatus
ENSMALG00000008861	shrprbck1r	55	55.270	ENSDARG00000076995	sharpin	94	55.270	Danio_rerio
ENSMALG00000008861	shrprbck1r	96	71.655	ENSDARG00000059871	shrprbck1r	96	72.134	Danio_rerio
ENSMALG00000008861	shrprbck1r	95	75.000	ENSELUG00000016022	shrprbck1r	96	75.000	Esox_lucius
ENSMALG00000008861	shrprbck1r	55	57.323	ENSFHEG00000013564	sharpin	87	57.323	Fundulus_heteroclitus
ENSMALG00000008861	shrprbck1r	55	45.385	ENSGAFG00000021405	sharpin	86	45.385	Gambusia_affinis
ENSMALG00000008861	shrprbck1r	95	79.234	ENSGAFG00000009309	shrprbck1r	96	79.234	Gambusia_affinis
ENSMALG00000008861	shrprbck1r	75	81.579	ENSGACG00000002544	shrprbck1r	100	81.579	Gasterosteus_aculeatus
ENSMALG00000008861	shrprbck1r	95	82.769	ENSHBUG00000021933	shrprbck1r	95	82.769	Haplochromis_burtoni
ENSMALG00000008861	shrprbck1r	55	54.220	ENSHCOG00000018847	sharpin	75	54.476	Hippocampus_comes
ENSMALG00000008861	shrprbck1r	54	56.853	ENSIPUG00000011951	sharpin	89	88.462	Ictalurus_punctatus
ENSMALG00000008861	shrprbck1r	95	69.287	ENSIPUG00000014247	shrprbck1r	95	69.287	Ictalurus_punctatus
ENSMALG00000008861	shrprbck1r	96	79.710	ENSKMAG00000015215	shrprbck1r	95	79.825	Kryptolebias_marmoratus
ENSMALG00000008861	shrprbck1r	55	57.868	ENSKMAG00000015204	sharpin	70	57.868	Kryptolebias_marmoratus
ENSMALG00000008861	shrprbck1r	95	84.786	ENSLBEG00000016876	shrprbck1r	95	84.786	Labrus_bergylta
ENSMALG00000008861	shrprbck1r	55	60.050	ENSLBEG00000016624	sharpin	89	60.050	Labrus_bergylta
ENSMALG00000008861	shrprbck1r	95	52.915	ENSLACG00000010948	-	97	52.915	Latimeria_chalumnae
ENSMALG00000008861	shrprbck1r	95	70.537	ENSLOCG00000008910	shrprbck1r	96	70.537	Lepisosteus_oculatus
ENSMALG00000008861	shrprbck1r	95	84.683	ENSMAMG00000022930	shrprbck1r	96	84.683	Mastacembelus_armatus
ENSMALG00000008861	shrprbck1r	95	82.769	ENSMZEG00005021257	shrprbck1r	95	82.769	Maylandia_zebra
ENSMALG00000008861	shrprbck1r	96	78.902	ENSMMOG00000003764	shrprbck1r	95	79.562	Mola_mola
ENSMALG00000008861	shrprbck1r	95	83.211	ENSNBRG00000002270	shrprbck1r	95	83.211	Neolamprologus_brichardi
ENSMALG00000008861	shrprbck1r	55	55.122	ENSONIG00000009626	-	97	55.122	Oreochromis_niloticus
ENSMALG00000008861	shrprbck1r	95	82.769	ENSONIG00000014401	shrprbck1r	95	82.769	Oreochromis_niloticus
ENSMALG00000008861	shrprbck1r	95	78.792	ENSORLG00000007392	shrprbck1r	96	78.792	Oryzias_latipes
ENSMALG00000008861	shrprbck1r	55	58.040	ENSORLG00000017281	sharpin	88	58.040	Oryzias_latipes
ENSMALG00000008861	shrprbck1r	55	58.040	ENSORLG00020000801	sharpin	88	58.040	Oryzias_latipes_hni
ENSMALG00000008861	shrprbck1r	95	78.351	ENSORLG00020018619	shrprbck1r	96	78.351	Oryzias_latipes_hni
ENSMALG00000008861	shrprbck1r	95	78.203	ENSORLG00015018865	shrprbck1r	96	78.203	Oryzias_latipes_hsok
ENSMALG00000008861	shrprbck1r	55	58.040	ENSORLG00015009860	sharpin	88	58.040	Oryzias_latipes_hsok
ENSMALG00000008861	shrprbck1r	55	44.588	ENSOMEG00000005729	sharpin	80	44.588	Oryzias_melastigma
ENSMALG00000008861	shrprbck1r	95	79.823	ENSOMEG00000012749	shrprbck1r	96	79.823	Oryzias_melastigma
ENSMALG00000008861	shrprbck1r	95	72.807	ENSPKIG00000006933	shrprbck1r	96	72.807	Paramormyrops_kingsleyae
ENSMALG00000008861	shrprbck1r	60	59.226	ENSPKIG00000018308	-	89	59.226	Paramormyrops_kingsleyae
ENSMALG00000008861	shrprbck1r	95	77.811	ENSPMGG00000013254	shrprbck1r	95	77.811	Periophthalmus_magnuspinnatus
ENSMALG00000008861	shrprbck1r	95	80.118	ENSPFOG00000004214	shrprbck1r	96	80.118	Poecilia_formosa
ENSMALG00000008861	shrprbck1r	55	56.818	ENSPFOG00000015253	sharpin	88	56.818	Poecilia_formosa
ENSMALG00000008861	shrprbck1r	55	57.071	ENSPLAG00000000423	sharpin	88	57.071	Poecilia_latipinna
ENSMALG00000008861	shrprbck1r	95	79.971	ENSPLAG00000020523	shrprbck1r	96	79.971	Poecilia_latipinna
ENSMALG00000008861	shrprbck1r	96	78.426	ENSPMEG00000006877	shrprbck1r	96	78.940	Poecilia_mexicana
ENSMALG00000008861	shrprbck1r	96	76.676	ENSPREG00000014689	shrprbck1r	96	77.452	Poecilia_reticulata
ENSMALG00000008861	shrprbck1r	55	56.818	ENSPREG00000009702	sharpin	88	56.818	Poecilia_reticulata
ENSMALG00000008861	shrprbck1r	95	83.211	ENSPNYG00000022601	shrprbck1r	95	83.211	Pundamilia_nyererei
ENSMALG00000008861	shrprbck1r	95	71.245	ENSPNAG00000007847	shrprbck1r	96	71.245	Pygocentrus_nattereri
ENSMALG00000008861	shrprbck1r	55	54.756	ENSPNAG00000002911	sharpin	99	54.872	Pygocentrus_nattereri
ENSMALG00000008861	shrprbck1r	59	52.412	ENSSFOG00015004028	sharpin	92	53.004	Scleropages_formosus
ENSMALG00000008861	shrprbck1r	75	62.430	ENSSFOG00015014150	-	96	62.852	Scleropages_formosus
ENSMALG00000008861	shrprbck1r	95	82.482	ENSSMAG00000018085	shrprbck1r	95	82.482	Scophthalmus_maximus
ENSMALG00000008861	shrprbck1r	55	45.161	ENSSDUG00000019039	sharpin	87	45.161	Seriola_dumerili
ENSMALG00000008861	shrprbck1r	95	86.892	ENSSDUG00000002959	shrprbck1r	96	86.892	Seriola_dumerili
ENSMALG00000008861	shrprbck1r	95	87.040	ENSSLDG00000009026	shrprbck1r	96	87.040	Seriola_lalandi_dorsalis
ENSMALG00000008861	shrprbck1r	92	83.005	ENSSPAG00000016097	shrprbck1r	94	83.005	Stegastes_partitus
ENSMALG00000008861	shrprbck1r	95	79.941	ENSTRUG00000006949	shrprbck1r	95	79.941	Takifugu_rubripes
ENSMALG00000008861	shrprbck1r	55	52.405	ENSTRUG00000011046	sharpin	87	52.645	Takifugu_rubripes
ENSMALG00000008861	shrprbck1r	55	55.831	ENSTNIG00000008521	sharpin	94	55.831	Tetraodon_nigroviridis
ENSMALG00000008861	shrprbck1r	96	77.147	ENSXCOG00000006701	shrprbck1r	95	77.500	Xiphophorus_couchianus
ENSMALG00000008861	shrprbck1r	55	44.730	ENSXCOG00000015019	sharpin	87	44.730	Xiphophorus_couchianus
ENSMALG00000008861	shrprbck1r	55	57.215	ENSXMAG00000022076	sharpin	88	57.215	Xiphophorus_maculatus
ENSMALG00000008861	shrprbck1r	96	77.147	ENSXMAG00000018972	shrprbck1r	95	77.500	Xiphophorus_maculatus