EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000008938 (Gene tree)
Gene ID: 109951410
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: vigilin-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 16311 bases
Position: chrKV885072.1:200078-216388
Accession: 109951410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000012622	KH_1	PF00013.29	1.1e-182	1	14
ENSMALP00000012622	KH_1	PF00013.29	1.1e-182	2	14
ENSMALP00000012622	KH_1	PF00013.29	1.1e-182	3	14
ENSMALP00000012622	KH_1	PF00013.29	1.1e-182	4	14
ENSMALP00000012622	KH_1	PF00013.29	1.1e-182	5	14
ENSMALP00000012622	KH_1	PF00013.29	1.1e-182	6	14
ENSMALP00000012622	KH_1	PF00013.29	1.1e-182	7	14
ENSMALP00000012622	KH_1	PF00013.29	1.1e-182	8	14
ENSMALP00000012622	KH_1	PF00013.29	1.1e-182	9	14
ENSMALP00000012622	KH_1	PF00013.29	1.1e-182	10	14
ENSMALP00000012622	KH_1	PF00013.29	1.1e-182	11	14
ENSMALP00000012622	KH_1	PF00013.29	1.1e-182	12	14
ENSMALP00000012622	KH_1	PF00013.29	1.1e-182	13	14
ENSMALP00000012622	KH_1	PF00013.29	1.1e-182	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000012890	-	3768	XM_020585907	ENSMALP00000012622	1255 (aa)	XP_020441563	-

Gene Model

Click here to download ENSMALG00000008938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000008938's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000008938	hdlbpb	100	70.133	ENSMALG00000015095	hdlbpa	100	70.211

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000008938	hdlbpb	100	95.662	ENSAPOG00000006904	hdlbpb	100	95.662	Acanthochromis_polyacanthus
ENSMALG00000008938	hdlbpb	100	89.560	ENSACIG00000016154	hdlbpb	100	89.560	Amphilophus_citrinellus
ENSMALG00000008938	hdlbpb	100	95.978	ENSAOCG00000004083	hdlbpb	100	95.978	Amphiprion_ocellaris
ENSMALG00000008938	hdlbpb	100	95.899	ENSAPEG00000012270	hdlbpb	100	95.899	Amphiprion_percula
ENSMALG00000008938	hdlbpb	100	94.401	ENSATEG00000019877	hdlbpb	100	94.401	Anabas_testudineus
ENSMALG00000008938	hdlbpb	100	80.915	ENSACAG00000003606	-	100	80.915	Anolis_carolinensis
ENSMALG00000008938	hdlbpb	100	94.795	ENSACLG00000006618	hdlbpb	100	94.795	Astatotilapia_calliptera
ENSMALG00000008938	hdlbpb	100	77.088	ENSAMXG00000019946	hdlbpb	100	77.088	Astyanax_mexicanus
ENSMALG00000008938	hdlbpb	100	93.770	ENSCSEG00000000955	hdlbpb	100	93.770	Cynoglossus_semilaevis
ENSMALG00000008938	hdlbpb	100	93.218	ENSCVAG00000005345	hdlbpb	100	93.218	Cyprinodon_variegatus
ENSMALG00000008938	hdlbpb	99	83.899	ENSDARG00000061864	hdlbpb	99	83.899	Danio_rerio
ENSMALG00000008938	hdlbpb	92	69.402	ENSEBUG00000005304	hdlbpb	96	69.402	Eptatretus_burgeri
ENSMALG00000008938	hdlbpb	100	76.531	ENSELUG00000019925	hdlbpb	100	76.688	Esox_lucius
ENSMALG00000008938	hdlbpb	87	33.897	ENSFHEG00000001701	hdlbpb	100	88.486	Fundulus_heteroclitus
ENSMALG00000008938	hdlbpb	95	87.362	ENSGMOG00000004522	hdlbpb	78	87.362	Gadus_morhua
ENSMALG00000008938	hdlbpb	100	93.375	ENSGAFG00000005278	hdlbpb	100	93.375	Gambusia_affinis
ENSMALG00000008938	hdlbpb	99	90.608	ENSGACG00000019361	hdlbpb	100	90.845	Gasterosteus_aculeatus
ENSMALG00000008938	hdlbpb	100	94.637	ENSHBUG00000018434	hdlbpb	100	94.637	Haplochromis_burtoni
ENSMALG00000008938	hdlbpb	100	83.609	ENSIPUG00000003291	HDLBP	100	83.944	Ictalurus_punctatus
ENSMALG00000008938	hdlbpb	100	94.164	ENSKMAG00000016562	hdlbpb	100	94.164	Kryptolebias_marmoratus
ENSMALG00000008938	hdlbpb	100	94.953	ENSLBEG00000027855	hdlbpb	100	94.953	Labrus_bergylta
ENSMALG00000008938	hdlbpb	100	83.238	ENSLACG00000007661	hdlbpb	90	83.238	Latimeria_chalumnae
ENSMALG00000008938	hdlbpb	100	81.403	ENSLOCG00000013909	hdlbpb	100	81.560	Lepisosteus_oculatus
ENSMALG00000008938	hdlbpb	100	95.584	ENSMAMG00000003035	hdlbpb	100	95.584	Mastacembelus_armatus
ENSMALG00000008938	hdlbpb	100	94.795	ENSMZEG00005021465	hdlbpb	100	94.795	Maylandia_zebra
ENSMALG00000008938	hdlbpb	100	93.139	ENSMMOG00000012525	hdlbpb	100	93.454	Mola_mola
ENSMALG00000008938	hdlbpb	100	94.795	ENSNBRG00000002236	hdlbpb	100	94.795	Neolamprologus_brichardi
ENSMALG00000008938	hdlbpb	100	94.558	ENSONIG00000009211	hdlbpb	100	94.558	Oreochromis_niloticus
ENSMALG00000008938	hdlbpb	100	93.375	ENSORLG00000006581	hdlbpb	100	93.375	Oryzias_latipes
ENSMALG00000008938	hdlbpb	100	93.612	ENSORLG00020010012	hdlbpb	100	93.612	Oryzias_latipes_hni
ENSMALG00000008938	hdlbpb	100	93.691	ENSORLG00015006863	hdlbpb	100	93.691	Oryzias_latipes_hsok
ENSMALG00000008938	hdlbpb	100	93.612	ENSOMEG00000011131	hdlbpb	100	93.612	Oryzias_melastigma
ENSMALG00000008938	hdlbpb	100	86.987	ENSPKIG00000005966	hdlbpb	100	86.987	Paramormyrops_kingsleyae
ENSMALG00000008938	hdlbpb	86	92.500	ENSPMGG00000019853	hdlbpb	99	92.500	Periophthalmus_magnuspinnatus
ENSMALG00000008938	hdlbpb	92	64.570	ENSPMAG00000000249	-	99	64.650	Petromyzon_marinus
ENSMALG00000008938	hdlbpb	94	72.917	ENSPMAG00000002131	hdlbpb	100	72.917	Petromyzon_marinus
ENSMALG00000008938	hdlbpb	100	92.590	ENSPFOG00000008755	hdlbpb	100	92.590	Poecilia_formosa
ENSMALG00000008938	hdlbpb	100	93.612	ENSPLAG00000007055	hdlbpb	100	93.612	Poecilia_latipinna
ENSMALG00000008938	hdlbpb	100	93.533	ENSPMEG00000001952	hdlbpb	100	93.533	Poecilia_mexicana
ENSMALG00000008938	hdlbpb	100	93.454	ENSPREG00000012848	hdlbpb	100	93.454	Poecilia_reticulata
ENSMALG00000008938	hdlbpb	100	94.558	ENSPNYG00000022467	hdlbpb	100	94.558	Pundamilia_nyererei
ENSMALG00000008938	hdlbpb	100	85.568	ENSPNAG00000011104	hdlbpb	100	85.568	Pygocentrus_nattereri
ENSMALG00000008938	hdlbpb	100	85.962	ENSSFOG00015023199	hdlbpb	100	85.962	Scleropages_formosus
ENSMALG00000008938	hdlbpb	100	94.953	ENSSMAG00000008790	hdlbpb	100	94.953	Scophthalmus_maximus
ENSMALG00000008938	hdlbpb	100	95.584	ENSSDUG00000020694	hdlbpb	100	95.584	Seriola_dumerili
ENSMALG00000008938	hdlbpb	100	95.110	ENSSLDG00000020807	hdlbpb	100	95.110	Seriola_lalandi_dorsalis
ENSMALG00000008938	hdlbpb	100	81.151	ENSSPUG00000018688	-	100	81.151	Sphenodon_punctatus
ENSMALG00000008938	hdlbpb	100	95.741	ENSSPAG00000016969	hdlbpb	100	95.741	Stegastes_partitus
ENSMALG00000008938	hdlbpb	98	90.736	ENSTRUG00000012888	hdlbpb	99	90.736	Takifugu_rubripes
ENSMALG00000008938	hdlbpb	99	91.856	ENSTNIG00000002555	hdlbpb	100	91.856	Tetraodon_nigroviridis
ENSMALG00000008938	hdlbpb	100	83.134	ENSXCOG00000001797	hdlbpb	100	83.134	Xiphophorus_couchianus
ENSMALG00000008938	hdlbpb	100	92.744	ENSXMAG00000015633	hdlbpb	100	92.744	Xiphophorus_maculatus