EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000009155 (Gene tree)
Gene ID: 109958633
Gene Symbol: -
Alias: -
Full Name: RNA-binding motif%2C single-stranded-interacting protein 3
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 250794 bases
Position: chrKV884722.1:2802042-3052835
Accession: 109958633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000013005	RRM_1	PF00076.22	2.6e-31	1	2
ENSMALP00000013005	RRM_1	PF00076.22	2.6e-31	2	2
ENSMALP00000012978	RRM_1	PF00076.22	3.3e-31	1	2
ENSMALP00000012978	RRM_1	PF00076.22	3.3e-31	2	2
ENSMALP00000012917	RRM_1	PF00076.22	5.1e-31	1	2
ENSMALP00000012917	RRM_1	PF00076.22	5.1e-31	2	2
ENSMALP00000012950	RRM_1	PF00076.22	5.2e-31	1	2
ENSMALP00000012950	RRM_1	PF00076.22	5.2e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000013258	-	1374	-	ENSMALP00000012978	452 (aa)	-	-
ENSMALT00000013285	-	1848	XM_020597447	ENSMALP00000013005	416 (aa)	XP_020453103	UPI0009B3CD71
ENSMALT00000013195	-	2244	XM_020597440	ENSMALP00000012917	523 (aa)	XP_020453096	UPI0009B35B3A
ENSMALT00000013230	-	2253	-	ENSMALP00000012950	526 (aa)	-	-

Gene Model

Click here to download ENSMALG00000009155's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000009155's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000009155	-	88	75.068	ENSMALG00000016900	rbms2a	89	78.212
ENSMALG00000009155	-	99	83.294	ENSMALG00000019536	RBMS3	99	83.529
ENSMALG00000009155	-	50	33.636	ENSMALG00000021265	-	62	33.624
ENSMALG00000009155	-	51	33.684	ENSMALG00000011017	pabpc4	59	33.684
ENSMALG00000009155	-	78	78.528	ENSMALG00000014520	rbms2b	80	77.778
ENSMALG00000009155	-	82	59.184	ENSMALG00000014235	rbms1a	91	57.835
ENSMALG00000009155	-	78	72.508	ENSMALG00000015715	-	90	70.339

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000009155	-	99	88.095	ENSG00000144642	RBMS3	100	90.530	Homo_sapiens
ENSMALG00000009155	-	100	99.038	ENSAPOG00000003432	-	100	99.038	Acanthochromis_polyacanthus
ENSMALG00000009155	-	99	77.243	ENSAPOG00000007266	rbms3	93	85.195	Acanthochromis_polyacanthus
ENSMALG00000009155	-	69	83.498	ENSAMEG00000005947	RBMS3	99	83.498	Ailuropoda_melanoleuca
ENSMALG00000009155	-	88	74.863	ENSACIG00000021113	RBMS3	95	75.137	Amphilophus_citrinellus
ENSMALG00000009155	-	78	96.626	ENSACIG00000006987	-	88	98.131	Amphilophus_citrinellus
ENSMALG00000009155	-	99	82.864	ENSAOCG00000021274	rbms3	99	82.864	Amphiprion_ocellaris
ENSMALG00000009155	-	100	91.724	ENSAOCG00000024104	-	100	91.724	Amphiprion_ocellaris
ENSMALG00000009155	-	100	90.865	ENSAPEG00000009481	-	100	90.865	Amphiprion_percula
ENSMALG00000009155	-	82	84.091	ENSAPEG00000016299	rbms3	91	85.014	Amphiprion_percula
ENSMALG00000009155	-	99	83.491	ENSATEG00000024295	rbms3	99	83.726	Anabas_testudineus
ENSMALG00000009155	-	100	99.279	ENSATEG00000008433	-	100	99.279	Anabas_testudineus
ENSMALG00000009155	-	99	86.111	ENSAPLG00000012270	RBMS3	99	85.417	Anas_platyrhynchos
ENSMALG00000009155	-	99	89.021	ENSACAG00000028664	RBMS3	99	89.021	Anolis_carolinensis
ENSMALG00000009155	-	99	85.450	ENSANAG00000021899	RBMS3	99	85.450	Aotus_nancymaae
ENSMALG00000009155	-	99	82.742	ENSACLG00000018506	rbms3	99	82.979	Astatotilapia_calliptera
ENSMALG00000009155	-	100	89.749	ENSACLG00000008976	-	100	89.773	Astatotilapia_calliptera
ENSMALG00000009155	-	99	89.855	ENSAMXG00000020388	rbms3	99	89.855	Astyanax_mexicanus
ENSMALG00000009155	-	62	87.597	ENSAMXG00000043770	-	100	87.597	Astyanax_mexicanus
ENSMALG00000009155	-	99	89.048	ENSBTAG00000044062	RBMS3	99	89.048	Bos_taurus
ENSMALG00000009155	-	99	85.450	ENSCJAG00000004312	RBMS3	99	85.450	Callithrix_jacchus
ENSMALG00000009155	-	99	84.862	ENSCAFG00000005464	RBMS3	99	84.862	Canis_familiaris
ENSMALG00000009155	-	99	84.862	ENSCAFG00020024980	RBMS3	99	84.862	Canis_lupus_dingo
ENSMALG00000009155	-	99	88.571	ENSCHIG00000009144	RBMS3	99	88.571	Capra_hircus
ENSMALG00000009155	-	76	85.152	ENSTSYG00000002615	RBMS3	99	85.152	Carlito_syrichta
ENSMALG00000009155	-	88	83.014	ENSCAPG00000017783	RBMS3	95	82.306	Cavia_aperea
ENSMALG00000009155	-	99	88.434	ENSCPOG00000006457	RBMS3	99	88.434	Cavia_porcellus
ENSMALG00000009155	-	99	85.450	ENSCCAG00000008671	RBMS3	99	85.450	Cebus_capucinus
ENSMALG00000009155	-	100	85.092	ENSCATG00000013222	RBMS3	100	85.092	Cercocebus_atys
ENSMALG00000009155	-	99	87.619	ENSCLAG00000005866	RBMS3	99	87.619	Chinchilla_lanigera
ENSMALG00000009155	-	65	87.037	ENSCSAG00000009655	RBMS3	99	87.037	Chlorocebus_sabaeus
ENSMALG00000009155	-	87	88.000	ENSCHOG00000000758	RBMS3	86	88.000	Choloepus_hoffmanni
ENSMALG00000009155	-	99	88.783	ENSCPBG00000022678	RBMS3	98	91.029	Chrysemys_picta_bellii
ENSMALG00000009155	-	99	85.219	ENSCANG00000032137	RBMS3	99	85.219	Colobus_angolensis_palliatus
ENSMALG00000009155	-	99	86.265	ENSCGRG00001007243	Rbms3	99	86.265	Cricetulus_griseus_chok1gshd
ENSMALG00000009155	-	99	86.265	ENSCGRG00000004599	Rbms3	99	86.265	Cricetulus_griseus_crigri
ENSMALG00000009155	-	99	83.294	ENSCSEG00000010011	RBMS3	99	83.529	Cynoglossus_semilaevis
ENSMALG00000009155	-	100	97.837	ENSCSEG00000014677	-	94	99.588	Cynoglossus_semilaevis
ENSMALG00000009155	-	100	98.082	ENSCVAG00000022814	-	100	98.433	Cyprinodon_variegatus
ENSMALG00000009155	-	99	84.286	ENSCVAG00000022354	rbms3	99	84.286	Cyprinodon_variegatus
ENSMALG00000009155	-	99	90.097	ENSDARG00000044574	rbms3	95	94.891	Danio_rerio
ENSMALG00000009155	-	99	87.619	ENSDNOG00000016645	RBMS3	96	87.619	Dasypus_novemcinctus
ENSMALG00000009155	-	99	87.381	ENSDORG00000007220	Rbms3	99	87.381	Dipodomys_ordii
ENSMALG00000009155	-	87	83.333	ENSETEG00000009485	-	80	69.714	Echinops_telfairi
ENSMALG00000009155	-	67	53.710	ENSEBUG00000005830	rbms3	86	54.851	Eptatretus_burgeri
ENSMALG00000009155	-	99	87.857	ENSEASG00005006152	RBMS3	99	87.857	Equus_asinus_asinus
ENSMALG00000009155	-	99	87.857	ENSECAG00000017871	RBMS3	99	87.857	Equus_caballus
ENSMALG00000009155	-	90	79.798	ENSEEUG00000014337	RBMS3	100	79.798	Erinaceus_europaeus
ENSMALG00000009155	-	92	96.176	ENSELUG00000006905	-	100	95.812	Esox_lucius
ENSMALG00000009155	-	99	80.378	ENSELUG00000002862	rbms3	99	80.378	Esox_lucius
ENSMALG00000009155	-	99	87.619	ENSFCAG00000002130	RBMS3	99	87.619	Felis_catus
ENSMALG00000009155	-	99	89.021	ENSFALG00000009165	RBMS3	99	89.021	Ficedula_albicollis
ENSMALG00000009155	-	99	87.143	ENSFDAG00000008278	RBMS3	99	87.143	Fukomys_damarensis
ENSMALG00000009155	-	95	70.123	ENSFHEG00000004787	RBMS3	94	76.294	Fundulus_heteroclitus
ENSMALG00000009155	-	90	88.917	ENSGMOG00000002600	-	96	88.917	Gadus_morhua
ENSMALG00000009155	-	99	89.021	ENSGALG00000011439	RBMS3	99	89.021	Gallus_gallus
ENSMALG00000009155	-	100	98.321	ENSGAFG00000003329	-	100	98.321	Gambusia_affinis
ENSMALG00000009155	-	99	83.848	ENSGAFG00000000168	rbms3	99	83.848	Gambusia_affinis
ENSMALG00000009155	-	65	87.823	ENSGAGG00000004039	RBMS3	99	87.823	Gopherus_agassizii
ENSMALG00000009155	-	99	85.450	ENSGGOG00000007228	RBMS3	99	85.450	Gorilla_gorilla
ENSMALG00000009155	-	63	86.617	ENSHBUG00000021196	rbms3	94	86.617	Haplochromis_burtoni
ENSMALG00000009155	-	100	93.764	ENSHBUG00000019785	-	95	97.954	Haplochromis_burtoni
ENSMALG00000009155	-	99	87.619	ENSHGLG00000002170	RBMS3	99	87.619	Heterocephalus_glaber_female
ENSMALG00000009155	-	99	87.619	ENSHGLG00100014278	RBMS3	99	87.619	Heterocephalus_glaber_male
ENSMALG00000009155	-	100	96.882	ENSHCOG00000007894	-	100	96.882	Hippocampus_comes
ENSMALG00000009155	-	99	90.097	ENSIPUG00000017680	rbms3	99	90.097	Ictalurus_punctatus
ENSMALG00000009155	-	99	88.095	ENSSTOG00000006324	RBMS3	99	88.095	Ictidomys_tridecemlineatus
ENSMALG00000009155	-	99	84.048	ENSJJAG00000014708	Rbms3	99	84.286	Jaculus_jaculus
ENSMALG00000009155	-	99	81.967	ENSKMAG00000020500	rbms3	99	81.967	Kryptolebias_marmoratus
ENSMALG00000009155	-	100	98.317	ENSKMAG00000012586	-	100	98.317	Kryptolebias_marmoratus
ENSMALG00000009155	-	60	75.379	ENSLBEG00000006677	rbms3	98	75.379	Labrus_bergylta
ENSMALG00000009155	-	100	97.356	ENSLBEG00000027388	-	100	97.356	Labrus_bergylta
ENSMALG00000009155	-	99	91.388	ENSLACG00000010581	RBMS3	99	91.388	Latimeria_chalumnae
ENSMALG00000009155	-	69	91.349	ENSLOCG00000002328	rbms3	99	91.349	Lepisosteus_oculatus
ENSMALG00000009155	-	99	84.633	ENSLAFG00000000354	RBMS3	99	84.633	Loxodonta_africana
ENSMALG00000009155	-	99	87.857	ENSMFAG00000033300	RBMS3	99	87.857	Macaca_fascicularis
ENSMALG00000009155	-	99	87.857	ENSMMUG00000004404	RBMS3	99	87.857	Macaca_mulatta
ENSMALG00000009155	-	99	85.219	ENSMNEG00000035839	RBMS3	99	85.219	Macaca_nemestrina
ENSMALG00000009155	-	100	85.092	ENSMLEG00000029464	RBMS3	100	85.092	Mandrillus_leucophaeus
ENSMALG00000009155	-	99	83.765	ENSMAMG00000024043	rbms3	99	84.706	Mastacembelus_armatus
ENSMALG00000009155	-	97	97.382	ENSMAMG00000002176	-	100	98.721	Mastacembelus_armatus
ENSMALG00000009155	-	100	95.316	ENSMZEG00005026469	-	96	95.316	Maylandia_zebra
ENSMALG00000009155	-	99	82.742	ENSMZEG00005006308	rbms3	99	82.979	Maylandia_zebra
ENSMALG00000009155	-	99	86.265	ENSMAUG00000016436	Rbms3	99	86.265	Mesocricetus_auratus
ENSMALG00000009155	-	99	85.450	ENSMICG00000049249	RBMS3	99	85.450	Microcebus_murinus
ENSMALG00000009155	-	99	86.024	ENSMOCG00000006997	Rbms3	99	86.024	Microtus_ochrogaster
ENSMALG00000009155	-	100	96.875	ENSMMOG00000015071	-	100	96.875	Mola_mola
ENSMALG00000009155	-	82	84.857	ENSMMOG00000008471	RBMS3	89	88.182	Mola_mola
ENSMALG00000009155	-	99	80.580	ENSMODG00000015125	RBMS3	99	80.357	Monodelphis_domestica
ENSMALG00000009155	-	99	85.301	MGP_CAROLIEiJ_G0032783	Rbms3	100	90.821	Mus_caroli
ENSMALG00000009155	-	99	86.024	ENSMUSG00000039607	Rbms3	100	92.271	Mus_musculus
ENSMALG00000009155	-	99	85.817	MGP_PahariEiJ_G0015650	Rbms3	100	92.271	Mus_pahari
ENSMALG00000009155	-	99	86.024	MGP_SPRETEiJ_G0033930	Rbms3	100	92.271	Mus_spretus
ENSMALG00000009155	-	99	84.862	ENSMPUG00000011956	RBMS3	99	84.862	Mustela_putorius_furo
ENSMALG00000009155	-	99	88.333	ENSMLUG00000000659	RBMS3	99	88.333	Myotis_lucifugus
ENSMALG00000009155	-	99	87.952	ENSNGAG00000014039	Rbms3	99	87.952	Nannospalax_galili
ENSMALG00000009155	-	100	97.837	ENSNBRG00000018065	-	100	97.837	Neolamprologus_brichardi
ENSMALG00000009155	-	99	85.450	ENSNLEG00000004129	RBMS3	99	85.450	Nomascus_leucogenys
ENSMALG00000009155	-	99	78.719	ENSMEUG00000004772	RBMS3	99	78.719	Notamacropus_eugenii
ENSMALG00000009155	-	99	84.758	ENSOPRG00000006808	RBMS3	85	84.758	Ochotona_princeps
ENSMALG00000009155	-	99	87.619	ENSODEG00000003651	RBMS3	99	87.619	Octodon_degus
ENSMALG00000009155	-	99	77.435	ENSONIG00000007172	rbms3	99	80.535	Oreochromis_niloticus
ENSMALG00000009155	-	99	86.009	ENSOANG00000010529	RBMS3	99	86.009	Ornithorhynchus_anatinus
ENSMALG00000009155	-	99	84.174	ENSOCUG00000004840	RBMS3	99	84.174	Oryctolagus_cuniculus
ENSMALG00000009155	-	100	97.356	ENSORLG00000002306	-	100	97.356	Oryzias_latipes
ENSMALG00000009155	-	99	81.948	ENSORLG00000005370	RBMS3	99	81.948	Oryzias_latipes
ENSMALG00000009155	-	100	97.596	ENSORLG00020008496	-	100	97.596	Oryzias_latipes_hni
ENSMALG00000009155	-	99	81.710	ENSORLG00020022674	RBMS3	99	81.710	Oryzias_latipes_hni
ENSMALG00000009155	-	99	82.185	ENSORLG00015005509	rbms3	99	82.185	Oryzias_latipes_hsok
ENSMALG00000009155	-	100	97.596	ENSORLG00015015719	-	100	97.596	Oryzias_latipes_hsok
ENSMALG00000009155	-	99	82.660	ENSOMEG00000014805	RBMS3	99	82.660	Oryzias_melastigma
ENSMALG00000009155	-	92	97.382	ENSOMEG00000007677	-	100	97.382	Oryzias_melastigma
ENSMALG00000009155	-	99	84.862	ENSOARG00000014684	RBMS3	99	84.862	Ovis_aries
ENSMALG00000009155	-	99	85.450	ENSPPAG00000036519	RBMS3	99	85.450	Pan_paniscus
ENSMALG00000009155	-	99	84.758	ENSPPRG00000002761	RBMS3	99	84.758	Panthera_pardus
ENSMALG00000009155	-	99	87.381	ENSPTIG00000011568	RBMS3	99	87.381	Panthera_tigris_altaica
ENSMALG00000009155	-	99	88.095	ENSPTRG00000014709	RBMS3	99	88.095	Pan_troglodytes
ENSMALG00000009155	-	100	85.092	ENSPANG00000010234	RBMS3	100	85.092	Papio_anubis
ENSMALG00000009155	-	62	93.411	ENSPKIG00000007989	-	100	93.411	Paramormyrops_kingsleyae
ENSMALG00000009155	-	50	93.750	ENSPKIG00000016025	-	73	93.750	Paramormyrops_kingsleyae
ENSMALG00000009155	-	99	88.305	ENSPSIG00000005269	RBMS3	99	88.305	Pelodiscus_sinensis
ENSMALG00000009155	-	92	97.906	ENSPMGG00000021683	-	100	97.906	Periophthalmus_magnuspinnatus
ENSMALG00000009155	-	82	83.908	ENSPMGG00000021544	rbms3	89	84.751	Periophthalmus_magnuspinnatus
ENSMALG00000009155	-	99	83.333	ENSPEMG00000001117	Rbms3	99	83.333	Peromyscus_maniculatus_bairdii
ENSMALG00000009155	-	83	90.313	ENSPCIG00000006106	RBMS3	89	90.187	Phascolarctos_cinereus
ENSMALG00000009155	-	99	84.323	ENSPFOG00000017887	rbms3	99	84.323	Poecilia_formosa
ENSMALG00000009155	-	77	82.243	ENSPLAG00000016866	-	82	82.243	Poecilia_latipinna
ENSMALG00000009155	-	100	98.321	ENSPMEG00000002993	-	100	98.321	Poecilia_mexicana
ENSMALG00000009155	-	90	99.401	ENSPREG00000018221	-	97	96.825	Poecilia_reticulata
ENSMALG00000009155	-	100	82.464	ENSPREG00000011880	rbms3	100	82.464	Poecilia_reticulata
ENSMALG00000009155	-	99	71.789	ENSPPYG00000014050	RBMS3	82	71.789	Pongo_abelii
ENSMALG00000009155	-	99	65.367	ENSPCAG00000006307	RBMS3	99	65.367	Procavia_capensis
ENSMALG00000009155	-	99	85.681	ENSPCOG00000017136	RBMS3	99	85.681	Propithecus_coquereli
ENSMALG00000009155	-	89	88.000	ENSPVAG00000014037	RBMS3	99	75.917	Pteropus_vampyrus
ENSMALG00000009155	-	100	98.077	ENSPNYG00000012624	-	100	98.077	Pundamilia_nyererei
ENSMALG00000009155	-	99	82.506	ENSPNYG00000010546	rbms3	99	82.742	Pundamilia_nyererei
ENSMALG00000009155	-	99	89.855	ENSPNAG00000001800	rbms3	99	89.855	Pygocentrus_nattereri
ENSMALG00000009155	-	99	86.265	ENSRNOG00000025881	Rbms3	99	86.265	Rattus_norvegicus
ENSMALG00000009155	-	99	84.988	ENSRBIG00000035863	RBMS3	99	84.988	Rhinopithecus_bieti
ENSMALG00000009155	-	88	86.280	ENSRROG00000027512	RBMS3	94	85.233	Rhinopithecus_roxellana
ENSMALG00000009155	-	99	85.450	ENSSBOG00000020232	RBMS3	99	85.450	Saimiri_boliviensis_boliviensis
ENSMALG00000009155	-	88	83.333	ENSSHAG00000002411	RBMS3	95	82.258	Sarcophilus_harrisii
ENSMALG00000009155	-	100	94.471	ENSSFOG00015008578	rbms3	100	94.471	Scleropages_formosus
ENSMALG00000009155	-	99	79.812	ENSSMAG00000004997	rbms3	99	83.607	Scophthalmus_maximus
ENSMALG00000009155	-	90	99.465	ENSSMAG00000020065	-	97	95.798	Scophthalmus_maximus
ENSMALG00000009155	-	99	83.529	ENSSDUG00000013656	RBMS3	99	83.765	Seriola_dumerili
ENSMALG00000009155	-	100	99.038	ENSSDUG00000019287	-	100	99.038	Seriola_dumerili
ENSMALG00000009155	-	99	83.178	ENSSLDG00000020276	RBMS3	99	83.411	Seriola_lalandi_dorsalis
ENSMALG00000009155	-	100	99.038	ENSSLDG00000013224	-	100	99.038	Seriola_lalandi_dorsalis
ENSMALG00000009155	-	78	74.561	ENSSARG00000000695	RBMS3	94	73.639	Sorex_araneus
ENSMALG00000009155	-	69	86.986	ENSSPUG00000017197	RBMS3	97	85.859	Sphenodon_punctatus
ENSMALG00000009155	-	100	90.575	ENSSPAG00000003983	-	99	91.914	Stegastes_partitus
ENSMALG00000009155	-	99	82.864	ENSSPAG00000020693	rbms3	99	83.099	Stegastes_partitus
ENSMALG00000009155	-	99	88.095	ENSSSCG00000036381	RBMS3	99	88.095	Sus_scrofa
ENSMALG00000009155	-	76	85.285	ENSTGUG00000003572	RBMS3	99	85.285	Taeniopygia_guttata
ENSMALG00000009155	-	99	81.176	ENSTRUG00000021719	RBMS3	99	81.176	Takifugu_rubripes
ENSMALG00000009155	-	100	86.461	ENSTRUG00000007482	-	100	86.635	Takifugu_rubripes
ENSMALG00000009155	-	78	88.304	ENSTBEG00000005362	RBMS3	94	87.106	Tupaia_belangeri
ENSMALG00000009155	-	99	84.633	ENSTTRG00000006202	RBMS3	99	84.633	Tursiops_truncatus
ENSMALG00000009155	-	99	84.862	ENSUMAG00000000263	RBMS3	99	84.862	Ursus_maritimus
ENSMALG00000009155	-	88	75.853	ENSVPAG00000003842	RBMS3	94	74.807	Vicugna_pacos
ENSMALG00000009155	-	88	86.126	ENSVVUG00000004660	RBMS3	94	92.627	Vulpes_vulpes
ENSMALG00000009155	-	70	82.085	ENSXETG00000032055	RBMS3	98	82.085	Xenopus_tropicalis
ENSMALG00000009155	-	92	82.776	ENSXCOG00000019600	-	100	82.776	Xiphophorus_couchianus
ENSMALG00000009155	-	99	81.991	ENSXMAG00000021783	rbms3	99	81.991	Xiphophorus_maculatus
ENSMALG00000009155	-	100	98.561	ENSXMAG00000014382	-	100	98.561	Xiphophorus_maculatus