EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000009163 (Gene tree)
Gene ID: 109972481
Gene Symbol: srp54
Alias: zgc:55842|zgc:85713
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 10735 bases
Position: chrKV884946.1:207518-218252
Accession: 109972481
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000012963	SRP54	PF00448.22	1.2e-77	1	1
ENSMALP00000012963	SRP54_N	PF02881.19	8.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000013243	-	1359	XM_020621369	ENSMALP00000012963	452 (aa)	XP_020477025	-

Gene Model

Click here to download ENSMALG00000009163's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000009163's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000009163	srp54	98	95.485	ENSG00000100883	SRP54	100	97.674	Homo_sapiens
ENSMALG00000009163	srp54	98	99.097	ENSAPOG00000011314	srp54	88	99.097	Acanthochromis_polyacanthus
ENSMALG00000009163	srp54	98	95.485	ENSAMEG00000015544	SRP54	88	95.485	Ailuropoda_melanoleuca
ENSMALG00000009163	srp54	98	99.323	ENSACIG00000022831	srp54	96	99.323	Amphilophus_citrinellus
ENSMALG00000009163	srp54	98	99.097	ENSAOCG00000019401	srp54	88	99.097	Amphiprion_ocellaris
ENSMALG00000009163	srp54	98	99.097	ENSAPEG00000001977	srp54	88	99.097	Amphiprion_percula
ENSMALG00000009163	srp54	98	99.323	ENSATEG00000013877	srp54	88	99.323	Anabas_testudineus
ENSMALG00000009163	srp54	98	94.808	ENSAPLG00000010125	SRP54	89	94.808	Anas_platyrhynchos
ENSMALG00000009163	srp54	83	90.885	ENSACAG00000010631	-	86	90.885	Anolis_carolinensis
ENSMALG00000009163	srp54	98	94.357	ENSACAG00000002103	-	88	94.357	Anolis_carolinensis
ENSMALG00000009163	srp54	59	77.903	ENSACAG00000001124	-	80	77.903	Anolis_carolinensis
ENSMALG00000009163	srp54	98	95.485	ENSANAG00000022133	SRP54	88	95.485	Aotus_nancymaae
ENSMALG00000009163	srp54	98	99.549	ENSACLG00000015866	srp54	88	99.549	Astatotilapia_calliptera
ENSMALG00000009163	srp54	99	96.205	ENSAMXG00000032669	SRP54	89	96.205	Astyanax_mexicanus
ENSMALG00000009163	srp54	98	95.485	ENSBTAG00000019085	SRP54	88	95.485	Bos_taurus
ENSMALG00000009163	srp54	98	73.874	WBGene00009012	F21D5.7	90	73.874	Caenorhabditis_elegans
ENSMALG00000009163	srp54	98	95.485	ENSCJAG00000006581	SRP54	88	95.485	Callithrix_jacchus
ENSMALG00000009163	srp54	98	95.485	ENSCAFG00000013331	SRP54	88	95.485	Canis_familiaris
ENSMALG00000009163	srp54	98	95.485	ENSCAFG00020023427	SRP54	88	95.485	Canis_lupus_dingo
ENSMALG00000009163	srp54	98	95.485	ENSCHIG00000026345	SRP54	88	95.485	Capra_hircus
ENSMALG00000009163	srp54	98	84.424	ENSTSYG00000035333	-	87	84.424	Carlito_syrichta
ENSMALG00000009163	srp54	98	95.260	ENSTSYG00000002680	-	88	95.260	Carlito_syrichta
ENSMALG00000009163	srp54	85	66.085	ENSCAPG00000008780	SRP54	84	66.085	Cavia_aperea
ENSMALG00000009163	srp54	98	95.034	ENSCPOG00000003691	SRP54	88	95.034	Cavia_porcellus
ENSMALG00000009163	srp54	87	94.986	ENSCCAG00000024179	SRP54	86	94.986	Cebus_capucinus
ENSMALG00000009163	srp54	98	95.485	ENSCATG00000034083	SRP54	88	95.485	Cercocebus_atys
ENSMALG00000009163	srp54	98	95.485	ENSCLAG00000015076	SRP54	88	95.485	Chinchilla_lanigera
ENSMALG00000009163	srp54	98	95.485	ENSCSAG00000015575	SRP54	88	95.485	Chlorocebus_sabaeus
ENSMALG00000009163	srp54	99	82.812	ENSCHOG00000008986	SRP54	93	82.812	Choloepus_hoffmanni
ENSMALG00000009163	srp54	98	95.034	ENSCPBG00000026195	SRP54	88	95.034	Chrysemys_picta_bellii
ENSMALG00000009163	srp54	98	85.068	ENSCING00000007380	-	88	85.068	Ciona_intestinalis
ENSMALG00000009163	srp54	98	95.485	ENSCANG00000028532	SRP54	88	95.485	Colobus_angolensis_palliatus
ENSMALG00000009163	srp54	99	94.643	ENSCGRG00001009525	-	89	94.643	Cricetulus_griseus_chok1gshd
ENSMALG00000009163	srp54	85	95.844	ENSCGRG00000009453	-	89	95.844	Cricetulus_griseus_crigri
ENSMALG00000009163	srp54	98	98.871	ENSCSEG00000012392	srp54	88	98.871	Cynoglossus_semilaevis
ENSMALG00000009163	srp54	99	97.768	ENSCVAG00000010395	srp54	89	97.768	Cyprinodon_variegatus
ENSMALG00000009163	srp54	99	96.652	ENSDARG00000098367	srp54	89	96.652	Danio_rerio
ENSMALG00000009163	srp54	98	95.485	ENSDNOG00000032525	SRP54	88	95.485	Dasypus_novemcinctus
ENSMALG00000009163	srp54	99	81.027	ENSDORG00000005159	-	97	81.027	Dipodomys_ordii
ENSMALG00000009163	srp54	98	80.090	FBgn0010747	Srp54k	87	80.090	Drosophila_melanogaster
ENSMALG00000009163	srp54	79	53.352	ENSETEG00000012102	-	84	53.352	Echinops_telfairi
ENSMALG00000009163	srp54	99	93.304	ENSETEG00000016307	-	89	93.304	Echinops_telfairi
ENSMALG00000009163	srp54	98	91.196	ENSEBUG00000009437	-	88	91.196	Eptatretus_burgeri
ENSMALG00000009163	srp54	98	95.485	ENSEASG00005002057	SRP54	88	95.485	Equus_asinus_asinus
ENSMALG00000009163	srp54	98	95.485	ENSECAG00000018042	SRP54	87	95.485	Equus_caballus
ENSMALG00000009163	srp54	98	78.104	ENSEEUG00000001511	SRP54	88	78.104	Erinaceus_europaeus
ENSMALG00000009163	srp54	98	97.065	ENSELUG00000003395	srp54	88	97.065	Esox_lucius
ENSMALG00000009163	srp54	99	94.420	ENSFCAG00000032033	SRP54	89	94.420	Felis_catus
ENSMALG00000009163	srp54	98	94.808	ENSFALG00000005995	SRP54	88	94.808	Ficedula_albicollis
ENSMALG00000009163	srp54	98	95.485	ENSFDAG00000016767	SRP54	89	95.485	Fukomys_damarensis
ENSMALG00000009163	srp54	98	98.871	ENSFHEG00000004263	srp54	97	91.868	Fundulus_heteroclitus
ENSMALG00000009163	srp54	92	91.367	ENSGMOG00000011391	srp54	87	91.367	Gadus_morhua
ENSMALG00000009163	srp54	98	94.808	ENSGALG00000023135	SRP54	88	94.808	Gallus_gallus
ENSMALG00000009163	srp54	98	98.871	ENSGAFG00000011586	srp54	88	98.871	Gambusia_affinis
ENSMALG00000009163	srp54	99	97.321	ENSGACG00000004181	srp54	100	98.157	Gasterosteus_aculeatus
ENSMALG00000009163	srp54	98	95.034	ENSGAGG00000014766	SRP54	88	95.034	Gopherus_agassizii
ENSMALG00000009163	srp54	98	95.485	ENSGGOG00000002926	SRP54	88	95.485	Gorilla_gorilla
ENSMALG00000009163	srp54	98	99.549	ENSHBUG00000005678	srp54	88	99.549	Haplochromis_burtoni
ENSMALG00000009163	srp54	98	95.485	ENSHGLG00000002850	SRP54	88	95.485	Heterocephalus_glaber_female
ENSMALG00000009163	srp54	98	95.485	ENSHGLG00100005263	SRP54	88	95.485	Heterocephalus_glaber_male
ENSMALG00000009163	srp54	98	64.414	ENSHGLG00100007281	-	87	64.414	Heterocephalus_glaber_male
ENSMALG00000009163	srp54	99	95.982	ENSHCOG00000021127	srp54	89	95.982	Hippocampus_comes
ENSMALG00000009163	srp54	99	95.759	ENSIPUG00000001420	srp54	89	95.759	Ictalurus_punctatus
ENSMALG00000009163	srp54	98	95.485	ENSSTOG00000016023	SRP54	88	95.485	Ictidomys_tridecemlineatus
ENSMALG00000009163	srp54	99	89.286	ENSJJAG00000013417	-	88	89.286	Jaculus_jaculus
ENSMALG00000009163	srp54	85	70.390	ENSJJAG00000016404	-	84	70.390	Jaculus_jaculus
ENSMALG00000009163	srp54	98	98.646	ENSKMAG00000007707	srp54	88	98.646	Kryptolebias_marmoratus
ENSMALG00000009163	srp54	98	99.323	ENSLBEG00000018690	srp54	88	99.323	Labrus_bergylta
ENSMALG00000009163	srp54	98	99.323	ENSLBEG00000021122	srp54	88	99.323	Labrus_bergylta
ENSMALG00000009163	srp54	98	94.808	ENSLACG00000017890	SRP54	88	94.808	Latimeria_chalumnae
ENSMALG00000009163	srp54	98	97.517	ENSLOCG00000009440	srp54	88	97.517	Lepisosteus_oculatus
ENSMALG00000009163	srp54	98	95.485	ENSLAFG00000012007	SRP54	88	95.485	Loxodonta_africana
ENSMALG00000009163	srp54	98	95.485	ENSMFAG00000044371	SRP54	88	95.485	Macaca_fascicularis
ENSMALG00000009163	srp54	98	95.485	ENSMMUG00000015073	FAM177A1	88	95.485	Macaca_mulatta
ENSMALG00000009163	srp54	98	95.485	ENSMNEG00000006947	SRP54	88	95.485	Macaca_nemestrina
ENSMALG00000009163	srp54	98	95.485	ENSMLEG00000042251	SRP54	88	95.485	Mandrillus_leucophaeus
ENSMALG00000009163	srp54	98	99.549	ENSMAMG00000004803	srp54	88	99.549	Mastacembelus_armatus
ENSMALG00000009163	srp54	98	99.549	ENSMZEG00005027528	srp54	88	99.549	Maylandia_zebra
ENSMALG00000009163	srp54	98	89.663	ENSMGAG00000012481	SRP54	88	89.663	Meleagris_gallopavo
ENSMALG00000009163	srp54	98	95.711	ENSMAUG00000014447	-	88	95.711	Mesocricetus_auratus
ENSMALG00000009163	srp54	98	95.485	ENSMICG00000010270	SRP54	88	95.485	Microcebus_murinus
ENSMALG00000009163	srp54	84	95.515	ENSMOCG00000000948	-	86	95.515	Microtus_ochrogaster
ENSMALG00000009163	srp54	99	97.105	ENSMMOG00000020303	srp54	98	97.105	Mola_mola
ENSMALG00000009163	srp54	98	95.485	ENSMODG00000023150	-	88	95.485	Monodelphis_domestica
ENSMALG00000009163	srp54	98	95.485	ENSMODG00000012925	-	88	95.485	Monodelphis_domestica
ENSMALG00000009163	srp54	98	95.711	MGP_CAROLIEiJ_G0017754	-	88	95.711	Mus_caroli
ENSMALG00000009163	srp54	99	93.973	ENSMUSG00000079108	Srp54c	89	93.973	Mus_musculus
ENSMALG00000009163	srp54	98	95.711	ENSMUSG00000073079	Srp54a	100	96.364	Mus_musculus
ENSMALG00000009163	srp54	98	95.711	ENSMUSG00000112449	Srp54b	88	95.711	Mus_musculus
ENSMALG00000009163	srp54	98	95.711	MGP_PahariEiJ_G0029510	-	88	95.711	Mus_pahari
ENSMALG00000009163	srp54	98	95.485	ENSMPUG00000016302	SRP54	88	95.485	Mustela_putorius_furo
ENSMALG00000009163	srp54	98	94.808	ENSMLUG00000008958	SRP54	88	94.808	Myotis_lucifugus
ENSMALG00000009163	srp54	98	84.876	ENSNGAG00000019806	-	87	84.876	Nannospalax_galili
ENSMALG00000009163	srp54	84	99.736	ENSNBRG00000006000	srp54	86	99.736	Neolamprologus_brichardi
ENSMALG00000009163	srp54	98	95.485	ENSNLEG00000003496	SRP54	88	95.485	Nomascus_leucogenys
ENSMALG00000009163	srp54	74	96.429	ENSMEUG00000000138	-	76	96.429	Notamacropus_eugenii
ENSMALG00000009163	srp54	98	95.485	ENSODEG00000004865	SRP54	88	95.485	Octodon_degus
ENSMALG00000009163	srp54	98	99.549	ENSONIG00000011768	srp54	88	99.549	Oreochromis_niloticus
ENSMALG00000009163	srp54	98	95.485	ENSOANG00000014051	SRP54	88	95.485	Ornithorhynchus_anatinus
ENSMALG00000009163	srp54	98	95.485	ENSOCUG00000007838	SRP54	88	95.485	Oryctolagus_cuniculus
ENSMALG00000009163	srp54	98	99.323	ENSORLG00000010027	srp54	88	99.323	Oryzias_latipes
ENSMALG00000009163	srp54	98	99.323	ENSORLG00020001878	srp54	88	99.323	Oryzias_latipes_hni
ENSMALG00000009163	srp54	98	99.323	ENSORLG00015021866	srp54	88	99.323	Oryzias_latipes_hsok
ENSMALG00000009163	srp54	98	99.097	ENSOMEG00000020952	srp54	88	99.097	Oryzias_melastigma
ENSMALG00000009163	srp54	98	95.485	ENSOGAG00000012188	SRP54	88	95.485	Otolemur_garnettii
ENSMALG00000009163	srp54	98	95.485	ENSOARG00000007160	SRP54	88	95.485	Ovis_aries
ENSMALG00000009163	srp54	98	95.485	ENSPPAG00000017434	SRP54	88	95.485	Pan_paniscus
ENSMALG00000009163	srp54	99	93.527	ENSPPRG00000014047	SRP54	89	93.527	Panthera_pardus
ENSMALG00000009163	srp54	99	94.420	ENSPTIG00000000744	SRP54	85	94.420	Panthera_tigris_altaica
ENSMALG00000009163	srp54	98	95.485	ENSPTRG00000006259	FAM177A1	88	95.485	Pan_troglodytes
ENSMALG00000009163	srp54	98	95.485	ENSPANG00000023853	SRP54	88	95.485	Papio_anubis
ENSMALG00000009163	srp54	99	96.205	ENSPKIG00000001953	srp54	89	96.205	Paramormyrops_kingsleyae
ENSMALG00000009163	srp54	98	95.034	ENSPSIG00000006476	SRP54	88	95.034	Pelodiscus_sinensis
ENSMALG00000009163	srp54	98	98.646	ENSPMGG00000004127	srp54	96	98.646	Periophthalmus_magnuspinnatus
ENSMALG00000009163	srp54	99	82.774	ENSPEMG00000019634	-	93	80.361	Peromyscus_maniculatus_bairdii
ENSMALG00000009163	srp54	98	92.325	ENSPMAG00000006078	-	88	92.325	Petromyzon_marinus
ENSMALG00000009163	srp54	99	94.643	ENSPCIG00000016175	SRP54	89	94.643	Phascolarctos_cinereus
ENSMALG00000009163	srp54	98	98.871	ENSPFOG00000008870	srp54	88	98.871	Poecilia_formosa
ENSMALG00000009163	srp54	98	98.871	ENSPLAG00000009889	srp54	88	98.871	Poecilia_latipinna
ENSMALG00000009163	srp54	98	98.871	ENSPMEG00000008601	srp54	88	98.871	Poecilia_mexicana
ENSMALG00000009163	srp54	98	98.871	ENSPREG00000004505	srp54	88	98.871	Poecilia_reticulata
ENSMALG00000009163	srp54	99	89.062	ENSPPYG00000005739	SRP54	89	89.062	Pongo_abelii
ENSMALG00000009163	srp54	99	90.402	ENSPCAG00000006268	SRP54	89	90.402	Procavia_capensis
ENSMALG00000009163	srp54	99	92.428	ENSPCOG00000022473	SRP54	89	92.428	Propithecus_coquereli
ENSMALG00000009163	srp54	70	96.809	ENSPVAG00000010056	SRP54	82	96.809	Pteropus_vampyrus
ENSMALG00000009163	srp54	98	99.549	ENSPNYG00000009717	srp54	88	99.549	Pundamilia_nyererei
ENSMALG00000009163	srp54	98	97.291	ENSPNAG00000008544	srp54	88	97.291	Pygocentrus_nattereri
ENSMALG00000009163	srp54	99	94.643	ENSRNOG00000032776	Srp54a	89	94.643	Rattus_norvegicus
ENSMALG00000009163	srp54	98	95.485	ENSRROG00000041292	SRP54	88	95.485	Rhinopithecus_roxellana
ENSMALG00000009163	srp54	96	51.701	YPR088C	SRP54	81	51.701	Saccharomyces_cerevisiae
ENSMALG00000009163	srp54	93	94.299	ENSSBOG00000035145	SRP54	87	95.157	Saimiri_boliviensis_boliviensis
ENSMALG00000009163	srp54	63	93.031	ENSSHAG00000000671	SRP54	84	93.031	Sarcophilus_harrisii
ENSMALG00000009163	srp54	98	97.291	ENSSFOG00015013920	srp54	88	97.291	Scleropages_formosus
ENSMALG00000009163	srp54	98	98.646	ENSSMAG00000002441	srp54	83	98.646	Scophthalmus_maximus
ENSMALG00000009163	srp54	98	98.871	ENSSDUG00000018586	srp54	88	98.871	Seriola_dumerili
ENSMALG00000009163	srp54	99	97.768	ENSSLDG00000010476	srp54	89	97.768	Seriola_lalandi_dorsalis
ENSMALG00000009163	srp54	98	95.485	ENSSARG00000002744	SRP54	88	95.485	Sorex_araneus
ENSMALG00000009163	srp54	98	95.034	ENSSPUG00000013101	SRP54	88	95.034	Sphenodon_punctatus
ENSMALG00000009163	srp54	98	99.097	ENSSPAG00000002354	srp54	88	99.097	Stegastes_partitus
ENSMALG00000009163	srp54	98	95.485	ENSSSCG00000001955	SRP54	88	95.485	Sus_scrofa
ENSMALG00000009163	srp54	98	94.808	ENSTGUG00000011945	-	89	94.808	Taeniopygia_guttata
ENSMALG00000009163	srp54	98	98.420	ENSTRUG00000007057	srp54	88	98.420	Takifugu_rubripes
ENSMALG00000009163	srp54	99	97.098	ENSTNIG00000002589	srp54	89	97.098	Tetraodon_nigroviridis
ENSMALG00000009163	srp54	85	85.492	ENSTBEG00000011409	SRP54	86	85.492	Tupaia_belangeri
ENSMALG00000009163	srp54	98	84.876	ENSTTRG00000000928	SRP54	88	84.876	Tursiops_truncatus
ENSMALG00000009163	srp54	58	96.183	ENSUAMG00000012385	SRP54	100	96.183	Ursus_americanus
ENSMALG00000009163	srp54	98	95.485	ENSUMAG00000011234	SRP54	88	95.485	Ursus_maritimus
ENSMALG00000009163	srp54	98	95.260	ENSVPAG00000005668	SRP54	93	95.260	Vicugna_pacos
ENSMALG00000009163	srp54	98	95.485	ENSVVUG00000019962	SRP54	88	95.485	Vulpes_vulpes
ENSMALG00000009163	srp54	98	78.396	ENSXETG00000012290	srp54	88	78.936	Xenopus_tropicalis
ENSMALG00000009163	srp54	99	97.991	ENSXCOG00000004658	srp54	97	97.991	Xiphophorus_couchianus
ENSMALG00000009163	srp54	98	98.871	ENSXMAG00000018315	srp54	88	98.871	Xiphophorus_maculatus