EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000009384 (Gene tree)
Gene ID: 109970222
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 11057 bases
Position: chrKV884880.1:566055-577111
Accession: 109970222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000013287	Fox-1_C	PF12414.8	7.7e-35	1	1
ENSMALP00000013287	RRM_1	PF00076.22	4.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000013572	-	1098	XM_020617639	ENSMALP00000013287	365 (aa)	XP_020473295	-

Gene Model

Click here to download ENSMALG00000009384's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000009384's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000009384	rbfox1l	81	55.891	ENSMALG00000003337	rbfox1	95	50.133
ENSMALG00000009384	rbfox1l	59	60.417	ENSMALG00000000623	rbfox2	100	60.251
ENSMALG00000009384	rbfox1l	85	61.736	ENSMALG00000018270	-	88	55.482
ENSMALG00000009384	rbfox1l	91	50.700	ENSMALG00000020407	rbfox3b	86	58.434

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000009384	rbfox1l	97	85.984	ENSAPOG00000016304	rbfox1l	98	85.714	Acanthochromis_polyacanthus
ENSMALG00000009384	rbfox1l	100	80.739	ENSACIG00000006441	rbfox1l	100	80.739	Amphilophus_citrinellus
ENSMALG00000009384	rbfox1l	86	85.535	ENSAOCG00000020938	rbfox1l	99	83.234	Amphiprion_ocellaris
ENSMALG00000009384	rbfox1l	100	86.684	ENSAPEG00000008232	rbfox1l	100	86.423	Amphiprion_percula
ENSMALG00000009384	rbfox1l	100	84.697	ENSATEG00000022649	rbfox1l	100	85.752	Anabas_testudineus
ENSMALG00000009384	rbfox1l	66	73.494	ENSACAG00000011931	-	91	73.896	Anolis_carolinensis
ENSMALG00000009384	rbfox1l	100	85.640	ENSACLG00000021394	rbfox1l	100	85.640	Astatotilapia_calliptera
ENSMALG00000009384	rbfox1l	100	85.079	ENSAMXG00000010470	rbfox1l	100	82.723	Astyanax_mexicanus
ENSMALG00000009384	rbfox1l	100	58.021	ENSCPBG00000010944	-	100	59.894	Chrysemys_picta_bellii
ENSMALG00000009384	rbfox1l	100	86.316	ENSCSEG00000018898	rbfox1l	100	86.842	Cynoglossus_semilaevis
ENSMALG00000009384	rbfox1l	100	84.334	ENSCVAG00000007986	rbfox1l	100	84.073	Cyprinodon_variegatus
ENSMALG00000009384	rbfox1l	100	82.723	ENSDARG00000021184	rbfox1l	100	81.414	Danio_rerio
ENSMALG00000009384	rbfox1l	100	78.684	ENSELUG00000015077	rbfox1l	100	78.626	Esox_lucius
ENSMALG00000009384	rbfox1l	95	92.683	ENSFHEG00000016557	rbfox1l	95	92.683	Fundulus_heteroclitus
ENSMALG00000009384	rbfox1l	100	79.634	ENSGMOG00000005040	rbfox1l	100	79.896	Gadus_morhua
ENSMALG00000009384	rbfox1l	92	84.181	ENSGAFG00000013211	rbfox1l	97	84.181	Gambusia_affinis
ENSMALG00000009384	rbfox1l	100	85.117	ENSGACG00000010757	rbfox1l	100	85.379	Gasterosteus_aculeatus
ENSMALG00000009384	rbfox1l	66	72.245	ENSGAGG00000012440	-	86	72.358	Gopherus_agassizii
ENSMALG00000009384	rbfox1l	100	85.640	ENSHBUG00000013406	rbfox1l	100	85.640	Haplochromis_burtoni
ENSMALG00000009384	rbfox1l	100	83.333	ENSHCOG00000020771	rbfox1l	100	84.375	Hippocampus_comes
ENSMALG00000009384	rbfox1l	99	77.249	ENSIPUG00000000065	rbfox1l	99	77.684	Ictalurus_punctatus
ENSMALG00000009384	rbfox1l	100	85.195	ENSKMAG00000005146	rbfox1l	100	85.714	Kryptolebias_marmoratus
ENSMALG00000009384	rbfox1l	100	88.251	ENSLBEG00000017089	rbfox1l	100	88.251	Labrus_bergylta
ENSMALG00000009384	rbfox1l	100	87.206	ENSMAMG00000019480	rbfox1l	100	88.512	Mastacembelus_armatus
ENSMALG00000009384	rbfox1l	100	85.640	ENSMZEG00005016374	rbfox1l	100	85.640	Maylandia_zebra
ENSMALG00000009384	rbfox1l	100	86.544	ENSMMOG00000016530	rbfox1l	100	86.544	Mola_mola
ENSMALG00000009384	rbfox1l	100	86.316	ENSNBRG00000003346	rbfox1l	100	86.316	Neolamprologus_brichardi
ENSMALG00000009384	rbfox1l	100	86.162	ENSONIG00000012754	rbfox1l	100	86.162	Oreochromis_niloticus
ENSMALG00000009384	rbfox1l	100	84.856	ENSORLG00000011269	rbfox1l	100	84.334	Oryzias_latipes
ENSMALG00000009384	rbfox1l	100	85.640	ENSORLG00020000162	rbfox1l	100	85.117	Oryzias_latipes_hni
ENSMALG00000009384	rbfox1l	100	85.379	ENSORLG00015013464	rbfox1l	100	84.856	Oryzias_latipes_hsok
ENSMALG00000009384	rbfox1l	100	85.379	ENSOMEG00000010584	rbfox1l	100	86.162	Oryzias_melastigma
ENSMALG00000009384	rbfox1l	100	85.526	ENSPKIG00000012029	rbfox1l	100	85.000	Paramormyrops_kingsleyae
ENSMALG00000009384	rbfox1l	100	78.158	ENSPMGG00000012082	rbfox1l	100	78.684	Periophthalmus_magnuspinnatus
ENSMALG00000009384	rbfox1l	100	85.901	ENSPFOG00000009338	rbfox1l	100	85.901	Poecilia_formosa
ENSMALG00000009384	rbfox1l	84	79.487	ENSPLAG00000012816	rbfox1l	98	77.607	Poecilia_latipinna
ENSMALG00000009384	rbfox1l	100	81.723	ENSPMEG00000017597	rbfox1l	100	81.462	Poecilia_mexicana
ENSMALG00000009384	rbfox1l	100	81.723	ENSPREG00000007940	rbfox1l	100	81.462	Poecilia_reticulata
ENSMALG00000009384	rbfox1l	100	85.379	ENSPNYG00000002098	rbfox1l	100	85.379	Pundamilia_nyererei
ENSMALG00000009384	rbfox1l	100	80.679	ENSPNAG00000001620	rbfox1l	100	79.896	Pygocentrus_nattereri
ENSMALG00000009384	rbfox1l	100	82.152	ENSSFOG00015000675	rbfox1l	100	82.677	Scleropages_formosus
ENSMALG00000009384	rbfox1l	100	86.423	ENSSMAG00000013090	rbfox1l	100	86.423	Scophthalmus_maximus
ENSMALG00000009384	rbfox1l	100	86.494	ENSSDUG00000008705	rbfox1l	100	86.494	Seriola_dumerili
ENSMALG00000009384	rbfox1l	100	86.494	ENSSLDG00000022256	rbfox1l	100	86.494	Seriola_lalandi_dorsalis
ENSMALG00000009384	rbfox1l	100	86.162	ENSSPAG00000016620	rbfox1l	100	85.640	Stegastes_partitus
ENSMALG00000009384	rbfox1l	96	84.699	ENSTRUG00000015905	rbfox1l	100	83.333	Takifugu_rubripes
ENSMALG00000009384	rbfox1l	67	81.509	ENSTNIG00000008088	rbfox1l	99	83.712	Tetraodon_nigroviridis
ENSMALG00000009384	rbfox1l	100	85.640	ENSXMAG00000023471	rbfox1l	100	85.640	Xiphophorus_maculatus