EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000009454 (Gene tree)
Gene ID: 109972479
Gene Symbol: dkc1
Alias: fc87a02|fi24a05|fv62a07|wu:fa28f10|wu:fc87a02|wu:fi24a05|wu:fv62a07|zgc:110395
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 9067 bases
Position: chrKV884946.1:426096-435162
Accession: 109972479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000013369	TruB_N	PF01509.18	4.5e-22	1	1
ENSMALP00000013369	PUA	PF01472.20	2.5e-17	1	1
ENSMALP00000013369	DKCLD	PF08068.12	7.7e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000013658	-	3230	XM_020621363	ENSMALP00000013369	506 (aa)	XP_020477019	-

Gene Model

Click here to download ENSMALG00000009454's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000009454's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000009454	dkc1	85	80.135	ENSG00000130826	DKC1	99	87.805	Homo_sapiens
ENSMALG00000009454	dkc1	94	87.243	ENSAPOG00000007799	dkc1	96	87.243	Acanthochromis_polyacanthus
ENSMALG00000009454	dkc1	87	80.410	ENSAMEG00000002776	DKC1	84	81.967	Ailuropoda_melanoleuca
ENSMALG00000009454	dkc1	95	85.062	ENSACIG00000022614	dkc1	97	86.157	Amphilophus_citrinellus
ENSMALG00000009454	dkc1	95	87.885	ENSAOCG00000013159	dkc1	98	84.568	Amphiprion_ocellaris
ENSMALG00000009454	dkc1	95	87.885	ENSAPEG00000002284	dkc1	98	87.992	Amphiprion_percula
ENSMALG00000009454	dkc1	92	84.711	ENSATEG00000013682	dkc1	95	85.861	Anabas_testudineus
ENSMALG00000009454	dkc1	79	86.284	ENSACAG00000015600	DKC1	69	86.284	Anolis_carolinensis
ENSMALG00000009454	dkc1	84	81.651	ENSANAG00000022732	DKC1	85	81.651	Aotus_nancymaae
ENSMALG00000009454	dkc1	94	84.025	ENSACLG00000015605	dkc1	97	84.810	Astatotilapia_calliptera
ENSMALG00000009454	dkc1	85	86.957	ENSAMXG00000017108	dkc1	85	87.500	Astyanax_mexicanus
ENSMALG00000009454	dkc1	91	77.609	ENSBTAG00000013045	DKC1	87	80.137	Bos_taurus
ENSMALG00000009454	dkc1	81	65.281	WBGene00010478	K01G5.5	93	63.658	Caenorhabditis_elegans
ENSMALG00000009454	dkc1	84	80.822	ENSCJAG00000004210	DKC1	85	80.822	Callithrix_jacchus
ENSMALG00000009454	dkc1	79	85.464	ENSCAFG00000019620	-	77	85.464	Canis_familiaris
ENSMALG00000009454	dkc1	78	76.010	ENSCAFG00000009311	-	78	76.010	Canis_familiaris
ENSMALG00000009454	dkc1	78	75.253	ENSCAFG00020009379	-	75	75.253	Canis_lupus_dingo
ENSMALG00000009454	dkc1	79	85.464	ENSCAFG00020008918	-	77	85.464	Canis_lupus_dingo
ENSMALG00000009454	dkc1	85	80.227	ENSCHIG00000017392	DKC1	87	80.227	Capra_hircus
ENSMALG00000009454	dkc1	85	78.146	ENSTSYG00000007681	DKC1	78	84.352	Carlito_syrichta
ENSMALG00000009454	dkc1	89	76.000	ENSCAPG00000003342	DKC1	85	86.096	Cavia_aperea
ENSMALG00000009454	dkc1	84	80.822	ENSCPOG00000008825	DKC1	85	80.822	Cavia_porcellus
ENSMALG00000009454	dkc1	84	71.364	ENSCCAG00000027418	DKC1	84	71.689	Cebus_capucinus
ENSMALG00000009454	dkc1	85	79.233	ENSCATG00000033602	DKC1	85	79.773	Cercocebus_atys
ENSMALG00000009454	dkc1	85	80.499	ENSCLAG00000000720	DKC1	87	80.499	Chinchilla_lanigera
ENSMALG00000009454	dkc1	85	79.684	ENSCSAG00000006706	DKC1	85	80.682	Chlorocebus_sabaeus
ENSMALG00000009454	dkc1	94	76.371	ENSCPBG00000005858	DKC1	87	84.597	Chrysemys_picta_bellii
ENSMALG00000009454	dkc1	78	80.353	ENSCING00000004599	-	82	75.520	Ciona_intestinalis
ENSMALG00000009454	dkc1	78	79.949	ENSCSAVG00000010047	-	91	77.372	Ciona_savignyi
ENSMALG00000009454	dkc1	85	79.684	ENSCANG00000027987	DKC1	85	80.682	Colobus_angolensis_palliatus
ENSMALG00000009454	dkc1	84	81.050	ENSCGRG00001014574	-	85	81.050	Cricetulus_griseus_chok1gshd
ENSMALG00000009454	dkc1	76	65.544	ENSCGRG00001016789	-	79	66.486	Cricetulus_griseus_chok1gshd
ENSMALG00000009454	dkc1	84	81.050	ENSCGRG00000016075	-	85	81.050	Cricetulus_griseus_crigri
ENSMALG00000009454	dkc1	76	65.544	ENSCGRG00000014809	-	77	66.486	Cricetulus_griseus_crigri
ENSMALG00000009454	dkc1	92	84.255	ENSCSEG00000012633	dkc1	90	88.372	Cynoglossus_semilaevis
ENSMALG00000009454	dkc1	86	89.703	ENSCVAG00000010155	dkc1	89	88.377	Cyprinodon_variegatus
ENSMALG00000009454	dkc1	82	91.127	ENSDARG00000016484	dkc1	92	84.549	Danio_rerio
ENSMALG00000009454	dkc1	93	75.926	ENSDNOG00000004218	DKC1	94	75.926	Dasypus_novemcinctus
ENSMALG00000009454	dkc1	55	71.326	ENSDORG00000013566	-	92	71.326	Dipodomys_ordii
ENSMALG00000009454	dkc1	84	69.142	FBgn0259937	Nop60B	88	68.000	Drosophila_melanogaster
ENSMALG00000009454	dkc1	78	84.596	ENSETEG00000016095	DKC1	80	84.596	Echinops_telfairi
ENSMALG00000009454	dkc1	65	77.812	ENSEBUG00000015962	dkc1	98	82.131	Eptatretus_burgeri
ENSMALG00000009454	dkc1	90	78.728	ENSEASG00005007484	DKC1	86	79.018	Equus_asinus_asinus
ENSMALG00000009454	dkc1	90	78.728	ENSECAG00000023524	DKC1	86	79.018	Equus_caballus
ENSMALG00000009454	dkc1	85	80.465	ENSEEUG00000003323	DKC1	99	81.840	Erinaceus_europaeus
ENSMALG00000009454	dkc1	88	86.283	ENSELUG00000014538	dkc1	86	88.073	Esox_lucius
ENSMALG00000009454	dkc1	79	85.287	ENSFCAG00000006577	DKC1	86	80.137	Felis_catus
ENSMALG00000009454	dkc1	86	78.936	ENSFALG00000011496	DKC1	84	80.090	Ficedula_albicollis
ENSMALG00000009454	dkc1	83	81.647	ENSFDAG00000002516	DKC1	87	79.638	Fukomys_damarensis
ENSMALG00000009454	dkc1	84	89.070	ENSFHEG00000004627	dkc1	96	86.071	Fundulus_heteroclitus
ENSMALG00000009454	dkc1	77	89.003	ENSGMOG00000017277	dkc1	100	89.003	Gadus_morhua
ENSMALG00000009454	dkc1	82	83.215	ENSGALG00000005054	DKC1	85	81.279	Gallus_gallus
ENSMALG00000009454	dkc1	85	90.762	ENSGAFG00000011486	dkc1	73	91.549	Gambusia_affinis
ENSMALG00000009454	dkc1	79	94.472	ENSGACG00000004373	dkc1	96	95.137	Gasterosteus_aculeatus
ENSMALG00000009454	dkc1	79	85.714	ENSGAGG00000011330	DKC1	84	81.106	Gopherus_agassizii
ENSMALG00000009454	dkc1	85	80.135	ENSGGOG00000001045	DKC1	85	80.682	Gorilla_gorilla
ENSMALG00000009454	dkc1	96	86.299	ENSHBUG00000012436	dkc1	99	86.600	Haplochromis_burtoni
ENSMALG00000009454	dkc1	93	75.975	ENSHGLG00000000649	DKC1	94	75.975	Heterocephalus_glaber_female
ENSMALG00000009454	dkc1	93	75.975	ENSHGLG00100001153	DKC1	95	75.975	Heterocephalus_glaber_male
ENSMALG00000009454	dkc1	91	83.547	ENSHCOG00000021099	dkc1	84	89.362	Hippocampus_comes
ENSMALG00000009454	dkc1	88	84.649	ENSIPUG00000010309	dkc1	100	79.304	Ictalurus_punctatus
ENSMALG00000009454	dkc1	94	76.371	ENSSTOG00000001074	-	83	84.975	Ictidomys_tridecemlineatus
ENSMALG00000009454	dkc1	86	68.750	ENSSTOG00000011904	-	82	69.213	Ictidomys_tridecemlineatus
ENSMALG00000009454	dkc1	86	73.853	ENSSTOG00000020149	-	85	74.371	Ictidomys_tridecemlineatus
ENSMALG00000009454	dkc1	55	72.202	ENSJJAG00000010086	-	92	72.202	Jaculus_jaculus
ENSMALG00000009454	dkc1	84	88.785	ENSKMAG00000008010	dkc1	89	88.235	Kryptolebias_marmoratus
ENSMALG00000009454	dkc1	84	90.824	ENSLBEG00000019122	dkc1	89	90.762	Labrus_bergylta
ENSMALG00000009454	dkc1	88	81.333	ENSLACG00000014025	DKC1	96	84.798	Latimeria_chalumnae
ENSMALG00000009454	dkc1	86	86.878	ENSLOCG00000013713	dkc1	88	88.915	Lepisosteus_oculatus
ENSMALG00000009454	dkc1	85	79.864	ENSLAFG00000000221	DKC1	86	79.864	Loxodonta_africana
ENSMALG00000009454	dkc1	85	79.910	ENSMFAG00000032398	DKC1	74	80.543	Macaca_fascicularis
ENSMALG00000009454	dkc1	85	79.684	ENSMMUG00000005768	DKC1	85	80.682	Macaca_mulatta
ENSMALG00000009454	dkc1	85	79.684	ENSMNEG00000034503	DKC1	85	80.682	Macaca_nemestrina
ENSMALG00000009454	dkc1	85	79.684	ENSMLEG00000034422	DKC1	85	80.682	Mandrillus_leucophaeus
ENSMALG00000009454	dkc1	80	95.782	ENSMAMG00000005427	dkc1	89	96.231	Mastacembelus_armatus
ENSMALG00000009454	dkc1	96	86.503	ENSMZEG00005014503	dkc1	99	86.800	Maylandia_zebra
ENSMALG00000009454	dkc1	75	85.090	ENSMGAG00000009238	DKC1	88	82.921	Meleagris_gallopavo
ENSMALG00000009454	dkc1	55	70.609	ENSMAUG00000016454	-	92	70.609	Mesocricetus_auratus
ENSMALG00000009454	dkc1	81	83.824	ENSMICG00000038751	-	81	83.824	Microcebus_murinus
ENSMALG00000009454	dkc1	79	71.951	ENSMICG00000002818	-	99	76.374	Microcebus_murinus
ENSMALG00000009454	dkc1	55	67.384	ENSMOCG00000001169	-	92	67.384	Microtus_ochrogaster
ENSMALG00000009454	dkc1	82	93.012	ENSMMOG00000020348	dkc1	90	93.012	Mola_mola
ENSMALG00000009454	dkc1	83	81.542	ENSMODG00000009243	DKC1	74	82.506	Monodelphis_domestica
ENSMALG00000009454	dkc1	84	69.128	MGP_CAROLIEiJ_G0033191	Dkc1	86	80.952	Mus_caroli
ENSMALG00000009454	dkc1	85	80.726	ENSMUSG00000031403	Dkc1	87	80.726	Mus_musculus
ENSMALG00000009454	dkc1	84	80.227	MGP_PahariEiJ_G0031735	Dkc1	86	80.227	Mus_pahari
ENSMALG00000009454	dkc1	85	80.726	MGP_SPRETEiJ_G0034351	Dkc1	86	80.726	Mus_spretus
ENSMALG00000009454	dkc1	90	78.634	ENSMPUG00000016136	DKC1	74	85.714	Mustela_putorius_furo
ENSMALG00000009454	dkc1	93	71.458	ENSMLUG00000011918	DKC1	93	71.753	Myotis_lucifugus
ENSMALG00000009454	dkc1	55	71.685	ENSNGAG00000015724	-	92	71.685	Nannospalax_galili
ENSMALG00000009454	dkc1	78	94.207	ENSNBRG00000005638	dkc1	83	93.674	Neolamprologus_brichardi
ENSMALG00000009454	dkc1	85	79.910	ENSNLEG00000014323	DKC1	85	80.455	Nomascus_leucogenys
ENSMALG00000009454	dkc1	80	80.788	ENSMEUG00000001066	DKC1	89	80.788	Notamacropus_eugenii
ENSMALG00000009454	dkc1	69	79.310	ENSOPRG00000005248	DKC1	69	79.310	Ochotona_princeps
ENSMALG00000009454	dkc1	55	71.326	ENSODEG00000000549	-	92	71.326	Octodon_degus
ENSMALG00000009454	dkc1	81	85.122	ENSODEG00000011816	-	86	80.638	Octodon_degus
ENSMALG00000009454	dkc1	95	87.037	ENSONIG00000013889	dkc1	99	86.627	Oreochromis_niloticus
ENSMALG00000009454	dkc1	88	80.449	ENSOANG00000008713	-	89	82.448	Ornithorhynchus_anatinus
ENSMALG00000009454	dkc1	55	63.072	ENSOANG00000022295	-	94	60.059	Ornithorhynchus_anatinus
ENSMALG00000009454	dkc1	85	79.638	ENSOCUG00000012646	DKC1	86	80.182	Oryctolagus_cuniculus
ENSMALG00000009454	dkc1	84	88.889	ENSORLG00000018748	dkc1	84	88.056	Oryzias_latipes
ENSMALG00000009454	dkc1	84	90.094	ENSOMEG00000005786	dkc1	83	91.286	Oryzias_melastigma
ENSMALG00000009454	dkc1	79	85.965	ENSOGAG00000003399	DKC1	76	85.965	Otolemur_garnettii
ENSMALG00000009454	dkc1	85	80.682	ENSOARG00000003047	DKC1	87	80.909	Ovis_aries
ENSMALG00000009454	dkc1	79	85.965	ENSPPAG00000023820	DKC1	85	80.909	Pan_paniscus
ENSMALG00000009454	dkc1	79	85.287	ENSPPRG00000009104	DKC1	86	80.137	Panthera_pardus
ENSMALG00000009454	dkc1	84	81.412	ENSPTIG00000017469	DKC1	86	81.412	Panthera_tigris_altaica
ENSMALG00000009454	dkc1	85	80.135	ENSPTRG00000022449	DKC1	85	80.682	Pan_troglodytes
ENSMALG00000009454	dkc1	86	79.775	ENSPTRG00000043416	-	75	80.317	Pan_troglodytes
ENSMALG00000009454	dkc1	85	79.684	ENSPANG00000011978	DKC1	85	80.682	Papio_anubis
ENSMALG00000009454	dkc1	83	88.180	ENSPKIG00000008443	dkc1	90	87.264	Paramormyrops_kingsleyae
ENSMALG00000009454	dkc1	71	88.827	ENSPSIG00000013765	DKC1	86	88.827	Pelodiscus_sinensis
ENSMALG00000009454	dkc1	78	87.879	ENSPMGG00000004097	dkc1	77	85.714	Periophthalmus_magnuspinnatus
ENSMALG00000009454	dkc1	63	82.184	ENSPEMG00000013348	Dkc1	73	82.184	Peromyscus_maniculatus_bairdii
ENSMALG00000009454	dkc1	80	84.729	ENSPCIG00000016706	DKC1	68	84.729	Phascolarctos_cinereus
ENSMALG00000009454	dkc1	85	91.244	ENSPFOG00000018653	dkc1	88	91.364	Poecilia_formosa
ENSMALG00000009454	dkc1	85	91.244	ENSPLAG00000003272	dkc1	79	91.364	Poecilia_latipinna
ENSMALG00000009454	dkc1	85	91.244	ENSPMEG00000010413	dkc1	88	91.364	Poecilia_mexicana
ENSMALG00000009454	dkc1	85	91.244	ENSPREG00000004100	dkc1	88	88.419	Poecilia_reticulata
ENSMALG00000009454	dkc1	95	75.354	ENSPPYG00000020892	DKC1	96	75.254	Pongo_abelii
ENSMALG00000009454	dkc1	74	85.561	ENSPCAG00000015034	DKC1	73	85.561	Procavia_capensis
ENSMALG00000009454	dkc1	85	79.458	ENSPCOG00000026874	DKC1	85	80.000	Propithecus_coquereli
ENSMALG00000009454	dkc1	84	81.352	ENSPVAG00000009222	DKC1	86	81.352	Pteropus_vampyrus
ENSMALG00000009454	dkc1	90	84.958	ENSPNYG00000020063	dkc1	97	84.774	Pundamilia_nyererei
ENSMALG00000009454	dkc1	85	86.788	ENSPNAG00000005780	dkc1	86	87.239	Pygocentrus_nattereri
ENSMALG00000009454	dkc1	84	76.591	ENSRNOG00000055562	Dkc1	86	76.591	Rattus_norvegicus
ENSMALG00000009454	dkc1	85	79.684	ENSRBIG00000028457	DKC1	74	80.317	Rhinopithecus_bieti
ENSMALG00000009454	dkc1	85	79.684	ENSRROG00000044780	DKC1	85	80.682	Rhinopithecus_roxellana
ENSMALG00000009454	dkc1	76	71.018	YLR175W	-	97	62.526	Saccharomyces_cerevisiae
ENSMALG00000009454	dkc1	84	80.909	ENSSBOG00000033746	DKC1	85	80.909	Saimiri_boliviensis_boliviensis
ENSMALG00000009454	dkc1	84	81.007	ENSSHAG00000002463	DKC1	92	81.193	Sarcophilus_harrisii
ENSMALG00000009454	dkc1	88	85.275	ENSSFOG00015009585	dkc1	96	82.317	Scleropages_formosus
ENSMALG00000009454	dkc1	88	89.135	ENSSMAG00000002552	dkc1	87	90.112	Scophthalmus_maximus
ENSMALG00000009454	dkc1	94	89.189	ENSSDUG00000009963	dkc1	98	88.710	Seriola_dumerili
ENSMALG00000009454	dkc1	91	86.724	ENSSLDG00000019342	dkc1	97	87.037	Seriola_lalandi_dorsalis
ENSMALG00000009454	dkc1	85	76.310	ENSSARG00000001822	DKC1	88	76.310	Sorex_araneus
ENSMALG00000009454	dkc1	79	85.213	ENSSPUG00000018907	DKC1	76	85.213	Sphenodon_punctatus
ENSMALG00000009454	dkc1	91	86.087	ENSSPAG00000002585	dkc1	92	85.421	Stegastes_partitus
ENSMALG00000009454	dkc1	79	85.464	ENSSSCG00000012823	DKC1	87	81.604	Sus_scrofa
ENSMALG00000009454	dkc1	80	83.210	ENSTGUG00000006781	DKC1	89	84.000	Taeniopygia_guttata
ENSMALG00000009454	dkc1	92	87.152	ENSTRUG00000004413	dkc1	93	87.152	Takifugu_rubripes
ENSMALG00000009454	dkc1	92	68.894	ENSTNIG00000002582	dkc1	93	69.182	Tetraodon_nigroviridis
ENSMALG00000009454	dkc1	57	81.271	ENSTBEG00000011262	DKC1	86	79.233	Tupaia_belangeri
ENSMALG00000009454	dkc1	55	86.282	ENSTTRG00000008089	DKC1	55	86.282	Tursiops_truncatus
ENSMALG00000009454	dkc1	90	78.414	ENSUAMG00000022721	DKC1	86	84.069	Ursus_americanus
ENSMALG00000009454	dkc1	90	77.974	ENSUMAG00000016899	DKC1	97	83.417	Ursus_maritimus
ENSMALG00000009454	dkc1	79	83.578	ENSVVUG00000020734	-	71	83.415	Vulpes_vulpes
ENSMALG00000009454	dkc1	79	70.426	ENSVVUG00000021671	-	75	69.363	Vulpes_vulpes
ENSMALG00000009454	dkc1	93	78.692	ENSXETG00000032517	DKC1	85	85.176	Xenopus_tropicalis
ENSMALG00000009454	dkc1	86	88.558	ENSXCOG00000005498	dkc1	92	89.277	Xiphophorus_couchianus
ENSMALG00000009454	dkc1	86	90.367	ENSXMAG00000004919	dkc1	86	91.142	Xiphophorus_maculatus