EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000009680 (Gene tree)
Gene ID: 109966703
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 21715 bases
Position: chrKV884805.1:1026780-1048494
Accession: 109966703
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000013708	AARP2CN	PF08142.12	3.6e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000014003	-	4573	XM_020611774	ENSMALP00000013708	1203 (aa)	XP_020467430	UPI0009B40774

Gene Model

Click here to download ENSMALG00000009680's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000009680's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000009680	bms1	99	59.738	ENSG00000165733	BMS1	96	64.000	Homo_sapiens
ENSMALG00000009680	bms1	88	82.143	ENSAPOG00000002296	bms1	100	83.224	Acanthochromis_polyacanthus
ENSMALG00000009680	bms1	99	59.923	ENSAMEG00000016834	BMS1	99	60.524	Ailuropoda_melanoleuca
ENSMALG00000009680	bms1	100	76.461	ENSACIG00000002588	bms1	100	75.631	Amphilophus_citrinellus
ENSMALG00000009680	bms1	100	82.406	ENSAOCG00000018088	bms1	100	83.797	Amphiprion_ocellaris
ENSMALG00000009680	bms1	100	82.869	ENSAPEG00000014673	bms1	100	83.770	Amphiprion_percula
ENSMALG00000009680	bms1	100	83.795	ENSATEG00000023465	bms1	100	84.327	Anabas_testudineus
ENSMALG00000009680	bms1	90	68.541	ENSAPLG00000003759	BMS1	90	69.123	Anas_platyrhynchos
ENSMALG00000009680	bms1	99	65.458	ENSACAG00000004537	-	90	68.226	Anolis_carolinensis
ENSMALG00000009680	bms1	95	66.720	ENSANAG00000023432	BMS1	96	64.364	Aotus_nancymaae
ENSMALG00000009680	bms1	100	80.929	ENSACLG00000001294	bms1	100	81.090	Astatotilapia_calliptera
ENSMALG00000009680	bms1	52	75.598	ENSAMXG00000011236	bms1	99	70.635	Astyanax_mexicanus
ENSMALG00000009680	bms1	99	60.294	ENSBTAG00000012878	BMS1	89	67.203	Bos_taurus
ENSMALG00000009680	bms1	86	53.695	WBGene00022021	Y61A9LA.10	96	55.906	Caenorhabditis_elegans
ENSMALG00000009680	bms1	51	67.042	ENSCJAG00000021705	BMS1	96	64.909	Callithrix_jacchus
ENSMALG00000009680	bms1	99	60.508	ENSCAFG00000007114	BMS1	99	61.017	Canis_familiaris
ENSMALG00000009680	bms1	99	60.508	ENSCAFG00020025282	BMS1	99	61.017	Canis_lupus_dingo
ENSMALG00000009680	bms1	58	59.329	ENSCHIG00000023251	BMS1	90	67.363	Capra_hircus
ENSMALG00000009680	bms1	99	57.430	ENSCAPG00000008652	BMS1	88	72.045	Cavia_aperea
ENSMALG00000009680	bms1	99	60.618	ENSCPOG00000000502	BMS1	89	73.409	Cavia_porcellus
ENSMALG00000009680	bms1	99	49.730	ENSCCAG00000024969	-	99	50.194	Cebus_capucinus
ENSMALG00000009680	bms1	51	66.934	ENSCATG00000030625	-	96	63.752	Cercocebus_atys
ENSMALG00000009680	bms1	71	57.048	ENSCATG00000008695	-	69	56.637	Cercocebus_atys
ENSMALG00000009680	bms1	95	66.667	ENSCLAG00000002446	BMS1	98	62.521	Chinchilla_lanigera
ENSMALG00000009680	bms1	51	67.095	ENSCSAG00000011118	BMS1	96	63.818	Chlorocebus_sabaeus
ENSMALG00000009680	bms1	99	60.447	ENSCHOG00000011055	BMS1	99	60.404	Choloepus_hoffmanni
ENSMALG00000009680	bms1	98	61.226	ENSCPBG00000025581	BMS1	82	75.114	Chrysemys_picta_bellii
ENSMALG00000009680	bms1	84	62.129	ENSCING00000003181	-	97	64.021	Ciona_intestinalis
ENSMALG00000009680	bms1	72	53.647	ENSCSAVG00000004113	-	88	53.333	Ciona_savignyi
ENSMALG00000009680	bms1	51	67.737	ENSCANG00000011609	BMS1	96	63.636	Colobus_angolensis_palliatus
ENSMALG00000009680	bms1	98	60.955	ENSCGRG00001019461	Bms1	99	60.951	Cricetulus_griseus_chok1gshd
ENSMALG00000009680	bms1	98	60.955	ENSCGRG00000009016	Bms1	99	60.951	Cricetulus_griseus_crigri
ENSMALG00000009680	bms1	99	75.040	ENSCSEG00000002469	bms1	100	75.813	Cynoglossus_semilaevis
ENSMALG00000009680	bms1	99	79.549	ENSCVAG00000008371	bms1	100	79.555	Cyprinodon_variegatus
ENSMALG00000009680	bms1	99	70.445	ENSDARG00000054154	bms1	99	71.822	Danio_rerio
ENSMALG00000009680	bms1	99	60.553	ENSDNOG00000015761	BMS1	97	63.781	Dasypus_novemcinctus
ENSMALG00000009680	bms1	99	60.355	ENSDORG00000002982	Bms1	99	61.864	Dipodomys_ordii
ENSMALG00000009680	bms1	97	45.894	FBgn0036686	CG7728	99	56.466	Drosophila_melanogaster
ENSMALG00000009680	bms1	84	66.964	ENSETEG00000009554	BMS1	81	66.964	Echinops_telfairi
ENSMALG00000009680	bms1	99	59.831	ENSEASG00005006894	BMS1	99	60.623	Equus_asinus_asinus
ENSMALG00000009680	bms1	99	60.557	ENSECAG00000001358	BMS1	99	60.389	Equus_caballus
ENSMALG00000009680	bms1	99	73.096	ENSELUG00000001756	bms1	99	73.420	Esox_lucius
ENSMALG00000009680	bms1	99	59.661	ENSFCAG00000011220	BMS1	98	61.224	Felis_catus
ENSMALG00000009680	bms1	99	66.234	ENSFALG00000006882	BMS1	92	68.269	Ficedula_albicollis
ENSMALG00000009680	bms1	99	60.109	ENSFDAG00000001422	BMS1	93	64.006	Fukomys_damarensis
ENSMALG00000009680	bms1	100	79.342	ENSFHEG00000003367	bms1	100	79.818	Fundulus_heteroclitus
ENSMALG00000009680	bms1	99	70.642	ENSGMOG00000000718	bms1	99	70.173	Gadus_morhua
ENSMALG00000009680	bms1	95	67.932	ENSGALG00000002624	BMS1	93	64.776	Gallus_gallus
ENSMALG00000009680	bms1	98	81.562	ENSGACG00000015334	bms1	93	81.094	Gasterosteus_aculeatus
ENSMALG00000009680	bms1	95	67.203	ENSGAGG00000003467	BMS1	99	61.830	Gopherus_agassizii
ENSMALG00000009680	bms1	100	81.177	ENSHBUG00000022628	bms1	100	81.059	Haplochromis_burtoni
ENSMALG00000009680	bms1	99	60.775	ENSHGLG00000000477	BMS1	88	66.292	Heterocephalus_glaber_female
ENSMALG00000009680	bms1	99	60.930	ENSHGLG00100002176	BMS1	88	66.292	Heterocephalus_glaber_male
ENSMALG00000009680	bms1	99	79.285	ENSHCOG00000017604	bms1	99	78.081	Hippocampus_comes
ENSMALG00000009680	bms1	99	71.168	ENSIPUG00000017855	bms1	100	71.553	Ictalurus_punctatus
ENSMALG00000009680	bms1	99	60.031	ENSSTOG00000015063	BMS1	90	66.667	Ictidomys_tridecemlineatus
ENSMALG00000009680	bms1	99	60.293	ENSJJAG00000017328	Bms1	99	60.354	Jaculus_jaculus
ENSMALG00000009680	bms1	65	74.460	ENSKMAG00000021982	bms1	97	73.611	Kryptolebias_marmoratus
ENSMALG00000009680	bms1	100	79.342	ENSLBEG00000028208	bms1	100	80.016	Labrus_bergylta
ENSMALG00000009680	bms1	99	57.639	ENSLACG00000001600	BMS1	87	75.862	Latimeria_chalumnae
ENSMALG00000009680	bms1	98	66.132	ENSLAFG00000006250	BMS1	98	61.268	Loxodonta_africana
ENSMALG00000009680	bms1	88	65.966	ENSMFAG00000037771	BMS1	99	64.299	Macaca_fascicularis
ENSMALG00000009680	bms1	77	61.771	ENSMMUG00000007426	-	78	61.972	Macaca_mulatta
ENSMALG00000009680	bms1	75	56.923	ENSMLEG00000029084	-	78	56.667	Mandrillus_leucophaeus
ENSMALG00000009680	bms1	100	84.628	ENSMAMG00000020855	bms1	100	84.298	Mastacembelus_armatus
ENSMALG00000009680	bms1	100	80.929	ENSMZEG00005005663	bms1	100	81.090	Maylandia_zebra
ENSMALG00000009680	bms1	91	67.230	ENSMGAG00000001170	BMS1	93	65.549	Meleagris_gallopavo
ENSMALG00000009680	bms1	98	60.876	ENSMAUG00000002195	Bms1	99	60.639	Mesocricetus_auratus
ENSMALG00000009680	bms1	99	59.553	ENSMICG00000009977	BMS1	96	62.264	Microcebus_murinus
ENSMALG00000009680	bms1	98	60.672	ENSMOCG00000002038	Bms1	97	63.158	Microtus_ochrogaster
ENSMALG00000009680	bms1	100	79.768	ENSMMOG00000000977	bms1	100	79.934	Mola_mola
ENSMALG00000009680	bms1	99	64.440	ENSMODG00000001177	BMS1	93	65.315	Monodelphis_domestica
ENSMALG00000009680	bms1	79	77.872	MGP_CAROLIEiJ_G0028785	-	84	77.872	Mus_caroli
ENSMALG00000009680	bms1	98	60.000	ENSMUSG00000030138	Bms1	88	73.016	Mus_musculus
ENSMALG00000009680	bms1	94	66.934	MGP_PahariEiJ_G0022539	Bms1	98	60.790	Mus_pahari
ENSMALG00000009680	bms1	98	60.078	MGP_SPRETEiJ_G0029816	Bms1	88	73.243	Mus_spretus
ENSMALG00000009680	bms1	99	59.830	ENSMPUG00000017276	BMS1	99	60.944	Mustela_putorius_furo
ENSMALG00000009680	bms1	99	59.861	ENSMLUG00000003260	BMS1	89	72.398	Myotis_lucifugus
ENSMALG00000009680	bms1	99	55.449	ENSNGAG00000015258	Bms1	89	64.361	Nannospalax_galili
ENSMALG00000009680	bms1	51	65.008	ENSNLEG00000015791	BMS1	98	61.379	Nomascus_leucogenys
ENSMALG00000009680	bms1	85	76.284	ENSOPRG00000005195	BMS1	80	76.341	Ochotona_princeps
ENSMALG00000009680	bms1	99	60.265	ENSODEG00000005554	BMS1	89	73.469	Octodon_degus
ENSMALG00000009680	bms1	100	82.066	ENSONIG00000007227	bms1	100	82.397	Oreochromis_niloticus
ENSMALG00000009680	bms1	97	65.909	ENSOANG00000000662	-	85	73.121	Ornithorhynchus_anatinus
ENSMALG00000009680	bms1	99	60.062	ENSOCUG00000005354	BMS1	97	62.241	Oryctolagus_cuniculus
ENSMALG00000009680	bms1	99	79.170	ENSORLG00000014655	bms1	99	79.004	Oryzias_latipes
ENSMALG00000009680	bms1	99	75.687	ENSORLG00020016246	bms1	99	76.433	Oryzias_latipes_hni
ENSMALG00000009680	bms1	99	76.380	ENSORLG00015014183	bms1	99	76.642	Oryzias_latipes_hsok
ENSMALG00000009680	bms1	99	79.339	ENSOMEG00000015042	bms1	99	79.308	Oryzias_melastigma
ENSMALG00000009680	bms1	99	59.574	ENSOGAG00000006511	BMS1	98	61.263	Otolemur_garnettii
ENSMALG00000009680	bms1	99	65.970	ENSOARG00000003900	BMS1	90	67.524	Ovis_aries
ENSMALG00000009680	bms1	99	57.077	ENSPPAG00000027837	BMS1	96	63.818	Pan_paniscus
ENSMALG00000009680	bms1	99	60.061	ENSPPRG00000001311	BMS1	98	60.674	Panthera_pardus
ENSMALG00000009680	bms1	99	58.891	ENSPTIG00000009652	BMS1	98	61.224	Panthera_tigris_altaica
ENSMALG00000009680	bms1	99	60.077	ENSPTRG00000002441	BMS1	96	63.636	Pan_troglodytes
ENSMALG00000009680	bms1	97	75.801	ENSPKIG00000008165	bms1	91	75.463	Paramormyrops_kingsleyae
ENSMALG00000009680	bms1	92	70.815	ENSPSIG00000006481	BMS1	99	61.443	Pelodiscus_sinensis
ENSMALG00000009680	bms1	59	52.174	ENSPEMG00000022467	Bms1	99	55.712	Peromyscus_maniculatus_bairdii
ENSMALG00000009680	bms1	91	74.253	ENSPCIG00000001339	BMS1	97	72.676	Phascolarctos_cinereus
ENSMALG00000009680	bms1	96	82.051	ENSPFOG00000015180	bms1	99	77.058	Poecilia_formosa
ENSMALG00000009680	bms1	99	79.648	ENSPMEG00000023176	bms1	94	78.860	Poecilia_mexicana
ENSMALG00000009680	bms1	99	78.709	ENSPREG00000002695	bms1	99	78.412	Poecilia_reticulata
ENSMALG00000009680	bms1	72	74.150	ENSPCAG00000014528	BMS1	70	72.500	Procavia_capensis
ENSMALG00000009680	bms1	90	65.385	ENSPCOG00000023834	-	95	60.952	Propithecus_coquereli
ENSMALG00000009680	bms1	55	61.056	ENSPVAG00000000725	BMS1	89	71.882	Pteropus_vampyrus
ENSMALG00000009680	bms1	100	78.832	ENSPNYG00000018866	bms1	100	78.815	Pundamilia_nyererei
ENSMALG00000009680	bms1	95	78.880	ENSPNAG00000000676	bms1	99	71.149	Pygocentrus_nattereri
ENSMALG00000009680	bms1	80	60.019	ENSRNOG00000006576	Bms1	86	73.409	Rattus_norvegicus
ENSMALG00000009680	bms1	51	67.252	ENSRROG00000040101	BMS1	88	69.091	Rhinopithecus_roxellana
ENSMALG00000009680	bms1	80	45.383	YPL217C	-	78	49.157	Saccharomyces_cerevisiae
ENSMALG00000009680	bms1	51	67.363	ENSSBOG00000035778	BMS1	96	64.130	Saimiri_boliviensis_boliviensis
ENSMALG00000009680	bms1	99	64.481	ENSSHAG00000005062	BMS1	96	64.769	Sarcophilus_harrisii
ENSMALG00000009680	bms1	52	78.788	ENSSFOG00015022313	bms1	99	71.506	Scleropages_formosus
ENSMALG00000009680	bms1	100	81.467	ENSSMAG00000019966	bms1	100	82.675	Scophthalmus_maximus
ENSMALG00000009680	bms1	100	84.659	ENSSDUG00000016875	bms1	100	85.065	Seriola_dumerili
ENSMALG00000009680	bms1	100	83.845	ENSSLDG00000015199	bms1	100	84.087	Seriola_lalandi_dorsalis
ENSMALG00000009680	bms1	98	67.192	ENSSPUG00000014454	BMS1	87	74.658	Sphenodon_punctatus
ENSMALG00000009680	bms1	99	60.154	ENSSSCG00000010198	BMS1	99	61.072	Sus_scrofa
ENSMALG00000009680	bms1	98	67.897	ENSTGUG00000006302	-	90	67.783	Taeniopygia_guttata
ENSMALG00000009680	bms1	99	71.701	ENSTRUG00000008028	bms1	99	71.488	Takifugu_rubripes
ENSMALG00000009680	bms1	99	73.440	ENSTNIG00000006216	bms1	92	74.400	Tetraodon_nigroviridis
ENSMALG00000009680	bms1	64	68.919	ENSTBEG00000001673	-	63	68.771	Tupaia_belangeri
ENSMALG00000009680	bms1	99	60.092	ENSTTRG00000007983	BMS1	86	76.886	Tursiops_truncatus
ENSMALG00000009680	bms1	99	59.629	ENSUAMG00000023996	BMS1	99	60.695	Ursus_americanus
ENSMALG00000009680	bms1	99	59.474	ENSUMAG00000016523	BMS1	99	60.541	Ursus_maritimus
ENSMALG00000009680	bms1	74	72.222	ENSVPAG00000007477	BMS1	90	72.113	Vicugna_pacos
ENSMALG00000009680	bms1	98	66.730	ENSVVUG00000021305	BMS1	99	61.496	Vulpes_vulpes
ENSMALG00000009680	bms1	98	60.754	ENSXETG00000008158	bms1	99	62.269	Xenopus_tropicalis
ENSMALG00000009680	bms1	99	76.729	ENSXCOG00000000506	bms1	96	90.172	Xiphophorus_couchianus
ENSMALG00000009680	bms1	99	78.319	ENSXMAG00000014236	bms1	99	79.039	Xiphophorus_maculatus