EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMALG00000010343 (Gene tree)
Gene ID
-
Gene Symbol
lsm5
Alias
zgc:171959
Full Name
LSM5 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type
protein_coding
Species
Monopterus_albus
Status
putative
Strand
Minus strand
Length
498 bases
Position
chrKV884691.1:8997466-8997963
Accession
109959970
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMALP00000014742LSMPF01423.227.1e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMALT00000015049-189XM_020599772ENSMALP0000001474262 (aa)XP_020455428-
Gene Model
Click here to download ENSMALG00000010343's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000010343's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMALG00000010343lsm510091.935ENSG00000106355LSM510091.935Homo_sapiens
ENSMALG00000010343lsm510093.548ENSAPOG00000011743LSM510093.548Acanthochromis_polyacanthus
ENSMALG00000010343lsm510093.548ENSAPOG00000020779LSM56893.548Acanthochromis_polyacanthus
ENSMALG00000010343lsm510091.935ENSAMEG00000006700LSM56891.935Ailuropoda_melanoleuca
ENSMALG00000010343lsm57388.889ENSACIG00000019185lsm58088.889Amphilophus_citrinellus
ENSMALG00000010343lsm510093.548ENSAOCG00000001636lsm56893.548Amphiprion_ocellaris
ENSMALG00000010343lsm510093.548ENSAPEG00000008151lsm56893.548Amphiprion_percula
ENSMALG00000010343lsm510093.548ENSAPEG00000008201lsm510093.548Amphiprion_percula
ENSMALG00000010343lsm58592.453ENSATEG00000020470lsm57688.889Anabas_testudineus
ENSMALG00000010343lsm59793.333ENSAPLG00000008171LSM58193.333Anas_platyrhynchos
ENSMALG00000010343lsm510087.097ENSANAG00000024192-6587.097Aotus_nancymaae
ENSMALG00000010343lsm510091.935ENSANAG00000034409-6891.935Aotus_nancymaae
ENSMALG00000010343lsm510085.484ENSANAG00000037758-7785.484Aotus_nancymaae
ENSMALG00000010343lsm510093.548ENSACLG00000012891lsm57093.548Astatotilapia_calliptera
ENSMALG00000010343lsm510076.923ENSAMXG00000035543lsm56976.923Astyanax_mexicanus
ENSMALG00000010343lsm510091.935ENSBTAG00000002332LSM56891.935Bos_taurus
ENSMALG00000010343lsm510074.194WBGene00003079lsm-56874.194Caenorhabditis_elegans
ENSMALG00000010343lsm510079.032ENSCJAG00000005678-6979.032Callithrix_jacchus
ENSMALG00000010343lsm510090.323ENSCAFG00000019261-6890.323Canis_familiaris
ENSMALG00000010343lsm510091.935ENSCAFG00020004946LSM56891.935Canis_lupus_dingo
ENSMALG00000010343lsm57373.333ENSCHIG00000021428-6369.492Capra_hircus
ENSMALG00000010343lsm510088.710ENSCHIG00000004079-6888.710Capra_hircus
ENSMALG00000010343lsm510091.935ENSCHIG00000024539LSM56891.935Capra_hircus
ENSMALG00000010343lsm510059.677ENSTSYG00000036637-6059.677Carlito_syrichta
ENSMALG00000010343lsm510091.935ENSTSYG00000006449-6891.935Carlito_syrichta
ENSMALG00000010343lsm59284.211ENSTSYG00000028728-6784.211Carlito_syrichta
ENSMALG00000010343lsm510085.484ENSTSYG00000026530-6785.484Carlito_syrichta
ENSMALG00000010343lsm510083.871ENSCAPG00000006980LSM58383.871Cavia_aperea
ENSMALG00000010343lsm510091.935ENSCPOG00000036386LSM57686.667Cavia_porcellus
ENSMALG00000010343lsm510091.935ENSCCAG00000037808-6891.935Cebus_capucinus
ENSMALG00000010343lsm510085.484ENSCCAG00000032792-7785.484Cebus_capucinus
ENSMALG00000010343lsm510090.323ENSCCAG00000000821-6890.323Cebus_capucinus
ENSMALG00000010343lsm59785.000ENSCCAG00000037334-7885.000Cebus_capucinus
ENSMALG00000010343lsm510090.323ENSCCAG00000032123-6890.323Cebus_capucinus
ENSMALG00000010343lsm510077.419ENSCATG00000014790-6677.419Cercocebus_atys
ENSMALG00000010343lsm510091.935ENSCATG00000040218LSM510091.935Cercocebus_atys
ENSMALG00000010343lsm510091.935ENSCLAG00000000202LSM57686.667Chinchilla_lanigera
ENSMALG00000010343lsm59577.966ENSCLAG00000005062-5977.966Chinchilla_lanigera
ENSMALG00000010343lsm57495.652ENSCHOG00000005335LSM56195.652Choloepus_hoffmanni
ENSMALG00000010343lsm510091.935ENSCPBG00000013685LSM56891.935Chrysemys_picta_bellii
ENSMALG00000010343lsm510082.258ENSCING00000020625-7082.258Ciona_intestinalis
ENSMALG00000010343lsm510082.258ENSCSAVG00000001439-7082.258Ciona_savignyi
ENSMALG00000010343lsm510091.935ENSCANG00000039909LSM510091.935Colobus_angolensis_palliatus
ENSMALG00000010343lsm510091.935ENSCGRG00001015461Lsm57686.667Cricetulus_griseus_chok1gshd
ENSMALG00000010343lsm510091.935ENSCGRG00000007677Lsm58391.935Cricetulus_griseus_crigri
ENSMALG00000010343lsm57388.889ENSCSEG00000015286lsm57688.889Cynoglossus_semilaevis
ENSMALG00000010343lsm510093.548ENSCVAG00000004262lsm57093.548Cyprinodon_variegatus
ENSMALG00000010343lsm510095.161ENSDARG00000071573lsm510095.161Danio_rerio
ENSMALG00000010343lsm510091.935ENSDNOG00000034958LSM56891.935Dasypus_novemcinctus
ENSMALG00000010343lsm59482.759ENSDNOG00000049495-6382.759Dasypus_novemcinctus
ENSMALG00000010343lsm510091.935ENSDORG00000009422Lsm57686.667Dipodomys_ordii
ENSMALG00000010343lsm59487.931FBgn0035675CG66106487.931Drosophila_melanogaster
ENSMALG00000010343lsm510067.742ENSETEG00000001469-6367.742Echinops_telfairi
ENSMALG00000010343lsm57971.429ENSETEG00000000777-5671.429Echinops_telfairi
ENSMALG00000010343lsm510091.935ENSETEG00000018068LSM56891.935Echinops_telfairi
ENSMALG00000010343lsm510072.581ENSETEG00000010651-6672.581Echinops_telfairi
ENSMALG00000010343lsm510072.581ENSETEG00000016074-8072.581Echinops_telfairi
ENSMALG00000010343lsm510093.548ENSEBUG00000008540lsm56893.548Eptatretus_burgeri
ENSMALG00000010343lsm510091.935ENSEASG00005003500LSM56891.935Equus_asinus_asinus
ENSMALG00000010343lsm510072.581ENSECAG00000018445LSM56572.581Equus_caballus
ENSMALG00000010343lsm59486.207ENSEEUG00000004102LSM59786.207Erinaceus_europaeus
ENSMALG00000010343lsm510095.161ENSELUG00000007792lsm56895.161Esox_lucius
ENSMALG00000010343lsm510091.935ENSFCAG00000000230LSM56891.935Felis_catus
ENSMALG00000010343lsm510091.935ENSFALG00000001892LSM57591.935Ficedula_albicollis
ENSMALG00000010343lsm510091.935ENSFDAG00000008767LSM57686.667Fukomys_damarensis
ENSMALG00000010343lsm510067.742ENSFDAG00000008685-7067.742Fukomys_damarensis
ENSMALG00000010343lsm510080.645ENSFHEG00000004011lsm56680.645Fundulus_heteroclitus
ENSMALG00000010343lsm59893.443ENSGMOG00000018235lsm56893.443Gadus_morhua
ENSMALG00000010343lsm510091.935ENSGALG00000041625LSM56891.935Gallus_gallus
ENSMALG00000010343lsm510093.548ENSGAFG00000016824lsm510093.548Gambusia_affinis
ENSMALG00000010343lsm510093.548ENSGACG00000005528lsm56893.548Gasterosteus_aculeatus
ENSMALG00000010343lsm510091.935ENSGAGG00000015593LSM56891.935Gopherus_agassizii
ENSMALG00000010343lsm510091.935ENSGGOG00000043469LSM56891.935Gorilla_gorilla
ENSMALG00000010343lsm510093.548ENSHBUG00000013773lsm57093.548Haplochromis_burtoni
ENSMALG00000010343lsm510091.935ENSHGLG00000011765LSM57686.667Heterocephalus_glaber_female
ENSMALG00000010343lsm510091.935ENSHGLG00100015610LSM57590.698Heterocephalus_glaber_male
ENSMALG00000010343lsm57386.667ENSHCOG00000008288lsm57686.667Hippocampus_comes
ENSMALG00000010343lsm510095.161ENSIPUG00000021095LSM56895.161Ictalurus_punctatus
ENSMALG00000010343lsm510091.935ENSSTOG00000012662LSM57686.667Ictidomys_tridecemlineatus
ENSMALG00000010343lsm510080.645ENSSTOG00000033886-7080.645Ictidomys_tridecemlineatus
ENSMALG00000010343lsm510091.935ENSJJAG00000012145-7686.667Jaculus_jaculus
ENSMALG00000010343lsm59579.661ENSJJAG00000016144-7179.661Jaculus_jaculus
ENSMALG00000010343lsm58188.000ENSJJAG00000004475-6388.000Jaculus_jaculus
ENSMALG00000010343lsm510091.935ENSKMAG00000021861lsm56891.935Kryptolebias_marmoratus
ENSMALG00000010343lsm510096.774ENSLACG00000022448LSM56896.774Latimeria_chalumnae
ENSMALG00000010343lsm510095.161ENSLOCG00000012903lsm56895.161Lepisosteus_oculatus
ENSMALG00000010343lsm510091.935ENSLAFG00000029579LSM56891.935Loxodonta_africana
ENSMALG00000010343lsm59479.310ENSLAFG00000027938-7379.310Loxodonta_africana
ENSMALG00000010343lsm510091.935ENSMFAG00000038508LSM56891.935Macaca_fascicularis
ENSMALG00000010343lsm510091.935ENSMFAG00000030152-6891.935Macaca_fascicularis
ENSMALG00000010343lsm510079.032ENSMMUG00000039822-6679.032Macaca_mulatta
ENSMALG00000010343lsm510091.935ENSMMUG00000030131-6891.935Macaca_mulatta
ENSMALG00000010343lsm510091.935ENSMNEG00000015331LSM510091.935Macaca_nemestrina
ENSMALG00000010343lsm510091.935ENSMNEG00000037935-6891.935Macaca_nemestrina
ENSMALG00000010343lsm510077.419ENSMLEG00000034037-6777.419Mandrillus_leucophaeus
ENSMALG00000010343lsm510091.935ENSMLEG00000024945LSM56891.935Mandrillus_leucophaeus
ENSMALG00000010343lsm510096.774ENSMAMG00000012869lsm56896.774Mastacembelus_armatus
ENSMALG00000010343lsm510093.548ENSMZEG00005019554lsm57093.548Maylandia_zebra
ENSMALG00000010343lsm510091.935ENSMGAG00000012117LSM56891.935Meleagris_gallopavo
ENSMALG00000010343lsm510091.935ENSMAUG00000008132-6891.935Mesocricetus_auratus
ENSMALG00000010343lsm510091.935ENSMAUG00000012222Lsm57686.667Mesocricetus_auratus
ENSMALG00000010343lsm510091.935ENSMICG00000005353LSM56891.935Microcebus_murinus
ENSMALG00000010343lsm59790.000ENSMICG00000033928-7890.000Microcebus_murinus
ENSMALG00000010343lsm510091.935ENSMOCG00000012018Lsm57686.667Microtus_ochrogaster
ENSMALG00000010343lsm510093.548ENSMMOG00000004026lsm57193.548Mola_mola
ENSMALG00000010343lsm510091.935ENSMODG00000013274-10091.935Monodelphis_domestica
ENSMALG00000010343lsm510091.935MGP_CAROLIEiJ_G0028421Lsm57686.667Mus_caroli
ENSMALG00000010343lsm510091.935ENSMUSG00000091625Lsm57686.667Mus_musculus
ENSMALG00000010343lsm510091.935MGP_PahariEiJ_G0022171Lsm57686.667Mus_pahari
ENSMALG00000010343lsm510091.935MGP_SPRETEiJ_G0029423Lsm57686.667Mus_spretus
ENSMALG00000010343lsm510091.935ENSMLUG00000017028LSM56891.935Myotis_lucifugus
ENSMALG00000010343lsm57983.673ENSNGAG00000022569-5983.673Nannospalax_galili
ENSMALG00000010343lsm510091.935ENSNGAG00000024142Lsm57686.667Nannospalax_galili
ENSMALG00000010343lsm58783.929ENSNGAG00000017707-6483.929Nannospalax_galili
ENSMALG00000010343lsm59292.982ENSNBRG00000011386lsm57692.982Neolamprologus_brichardi
ENSMALG00000010343lsm510091.935ENSNLEG00000015268LSM56891.935Nomascus_leucogenys
ENSMALG00000010343lsm510091.935ENSOPRG00000002443LSM58391.935Ochotona_princeps
ENSMALG00000010343lsm510091.935ENSODEG00000019072-6891.935Octodon_degus
ENSMALG00000010343lsm510091.935ENSODEG00000008258-7686.667Octodon_degus
ENSMALG00000010343lsm59456.897ENSOANG00000014540-7756.897Ornithorhynchus_anatinus
ENSMALG00000010343lsm510091.935ENSOCUG00000029043LSM56891.935Oryctolagus_cuniculus
ENSMALG00000010343lsm510095.161ENSORLG00020003019lsm56595.161Oryzias_latipes_hni
ENSMALG00000010343lsm510095.161ENSORLG00015003338lsm56895.161Oryzias_latipes_hsok
ENSMALG00000010343lsm510095.161ENSOMEG00000001078lsm56895.161Oryzias_melastigma
ENSMALG00000010343lsm510091.935ENSOGAG00000013892LSM56891.935Otolemur_garnettii
ENSMALG00000010343lsm510091.935ENSOARG00000006944LSM56891.935Ovis_aries
ENSMALG00000010343lsm510091.935ENSPPAG00000003697-6891.935Pan_paniscus
ENSMALG00000010343lsm510091.935ENSPPRG00000002550LSM56891.935Panthera_pardus
ENSMALG00000010343lsm510091.935ENSPTIG00000015604LSM56891.935Panthera_tigris_altaica
ENSMALG00000010343lsm510072.581ENSPTRG00000049488-6772.581Pan_troglodytes
ENSMALG00000010343lsm510091.935ENSPTRG00000019057LSM56891.935Pan_troglodytes
ENSMALG00000010343lsm510091.935ENSPANG00000033477-6891.935Papio_anubis
ENSMALG00000010343lsm510091.935ENSPANG00000032179-6891.935Papio_anubis
ENSMALG00000010343lsm510079.032ENSPANG00000032538-6679.032Papio_anubis
ENSMALG00000010343lsm510095.161ENSPKIG00000011910lsm56895.161Paramormyrops_kingsleyae
ENSMALG00000010343lsm59793.333ENSPSIG00000014796LSM58193.333Pelodiscus_sinensis
ENSMALG00000010343lsm510093.548ENSPMGG00000011699lsm510093.548Periophthalmus_magnuspinnatus
ENSMALG00000010343lsm510067.742ENSPEMG00000022375-6567.742Peromyscus_maniculatus_bairdii
ENSMALG00000010343lsm510093.548ENSPFOG00000001433lsm56893.548Poecilia_formosa
ENSMALG00000010343lsm510093.548ENSPLAG00000009665lsm56893.548Poecilia_latipinna
ENSMALG00000010343lsm510093.548ENSPMEG00000022265lsm56893.548Poecilia_mexicana
ENSMALG00000010343lsm510093.548ENSPREG00000022452lsm510093.548Poecilia_reticulata
ENSMALG00000010343lsm510088.710ENSPPYG00000017661LSM56888.710Pongo_abelii
ENSMALG00000010343lsm58494.231ENSPCAG00000013740LSM56494.231Procavia_capensis
ENSMALG00000010343lsm510091.935ENSPVAG00000009786LSM56891.935Pteropus_vampyrus
ENSMALG00000010343lsm510093.548ENSPNYG00000022236lsm57093.548Pundamilia_nyererei
ENSMALG00000010343lsm510095.161ENSPNAG00000001887lsm56895.161Pygocentrus_nattereri
ENSMALG00000010343lsm510091.935ENSRNOG00000042126Lsm56891.935Rattus_norvegicus
ENSMALG00000010343lsm510090.476ENSRNOG00000027305AABR07065089.16890.476Rattus_norvegicus
ENSMALG00000010343lsm510090.323ENSRBIG00000024431-6890.323Rhinopithecus_bieti
ENSMALG00000010343lsm510091.935ENSRBIG00000027803-10091.935Rhinopithecus_bieti
ENSMALG00000010343lsm510091.935ENSRBIG00000030340-6891.935Rhinopithecus_bieti
ENSMALG00000010343lsm510091.935ENSRBIG00000030714-6891.935Rhinopithecus_bieti
ENSMALG00000010343lsm510091.935ENSRROG00000042782-10091.935Rhinopithecus_roxellana
ENSMALG00000010343lsm510091.935ENSRROG00000023884-6891.935Rhinopithecus_roxellana
ENSMALG00000010343lsm510091.935ENSRROG00000004655-6891.935Rhinopithecus_roxellana
ENSMALG00000010343lsm59446.032YER146W-6846.032Saccharomyces_cerevisiae
ENSMALG00000010343lsm510080.645ENSSBOG00000034794-7780.645Saimiri_boliviensis_boliviensis
ENSMALG00000010343lsm510090.323ENSSBOG00000019124-6890.323Saimiri_boliviensis_boliviensis
ENSMALG00000010343lsm510091.935ENSSBOG00000012312LSM56891.935Saimiri_boliviensis_boliviensis
ENSMALG00000010343lsm510095.161ENSSFOG00015010099lsm56895.161Scleropages_formosus
ENSMALG00000010343lsm57388.889ENSSMAG00000007895lsm57688.889Scophthalmus_maximus
ENSMALG00000010343lsm510093.548ENSSDUG00000010762lsm510093.548Seriola_dumerili
ENSMALG00000010343lsm510093.548ENSSLDG00000025242lsm57688.889Seriola_lalandi_dorsalis
ENSMALG00000010343lsm59479.310ENSSLDG00000008014-6979.310Seriola_lalandi_dorsalis
ENSMALG00000010343lsm510053.226ENSSARG00000003330LSM56853.226Sorex_araneus
ENSMALG00000010343lsm510090.323ENSSPUG00000002690LSM510090.323Sphenodon_punctatus
ENSMALG00000010343lsm57388.889ENSSPAG00000005435lsm57688.889Stegastes_partitus
ENSMALG00000010343lsm510091.935ENSSSCG00000026064-6891.935Sus_scrofa
ENSMALG00000010343lsm56582.500ENSSSCG00000029661-5682.500Sus_scrofa
ENSMALG00000010343lsm510091.935ENSTGUG00000017539LSM56891.935Taeniopygia_guttata
ENSMALG00000010343lsm510091.935ENSTNIG00000008695lsm57091.935Tetraodon_nigroviridis
ENSMALG00000010343lsm510091.935ENSTBEG00000004876LSM56891.935Tupaia_belangeri
ENSMALG00000010343lsm510091.935ENSTTRG00000004237LSM56891.935Tursiops_truncatus
ENSMALG00000010343lsm510091.935ENSVPAG00000009985LSM56891.935Vicugna_pacos
ENSMALG00000010343lsm510091.935ENSVVUG00000021311LSM56891.935Vulpes_vulpes
ENSMALG00000010343lsm58592.453ENSXETG00000026465lsm56592.453Xenopus_tropicalis
ENSMALG00000010343lsm510093.548ENSXCOG00000015348lsm510093.548Xiphophorus_couchianus
ENSMALG00000010343lsm510093.548ENSXMAG00000029988lsm56893.548Xiphophorus_maculatus

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