EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000010375 (Gene tree)
Gene ID: 109965598
Gene Symbol: smg5
Alias: zgc:113841
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 17697 bases
Position: chrKV884789.1:352399-370095
Accession: 109965598
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000014828	EST1	PF10374.9	3.2e-24	1	1
ENSMALP00000014828	EST1_DNA_bind	PF10373.9	2.1e-26	1	1
ENSMALP00000014828	PIN_4	PF13638.6	3.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000015135	-	3354	XM_020609747	ENSMALP00000014828	1117 (aa)	XP_020465403	-

Gene Model

Click here to download ENSMALG00000010375's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000010375's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000010375	smg5	99	59.414	ENSG00000198952	SMG5	99	60.000	Homo_sapiens
ENSMALG00000010375	smg5	100	89.628	ENSAPOG00000019690	smg5	100	90.514	Acanthochromis_polyacanthus
ENSMALG00000010375	smg5	98	58.733	ENSAMEG00000014458	SMG5	100	58.733	Ailuropoda_melanoleuca
ENSMALG00000010375	smg5	100	81.923	ENSACIG00000001353	smg5	99	81.389	Amphilophus_citrinellus
ENSMALG00000010375	smg5	100	90.125	ENSAOCG00000019483	smg5	100	90.569	Amphiprion_ocellaris
ENSMALG00000010375	smg5	100	90.036	ENSAPEG00000022949	smg5	100	90.569	Amphiprion_percula
ENSMALG00000010375	smg5	100	89.235	ENSATEG00000005348	smg5	100	89.769	Anabas_testudineus
ENSMALG00000010375	smg5	98	62.791	ENSAPLG00000010263	SMG5	100	61.986	Anas_platyrhynchos
ENSMALG00000010375	smg5	99	58.563	ENSANAG00000032899	SMG5	99	59.644	Aotus_nancymaae
ENSMALG00000010375	smg5	100	87.411	ENSACLG00000009311	smg5	100	87.855	Astatotilapia_calliptera
ENSMALG00000010375	smg5	100	76.806	ENSAMXG00000024616	smg5	100	77.176	Astyanax_mexicanus
ENSMALG00000010375	smg5	96	43.368	ENSBTAG00000021747	-	96	43.368	Bos_taurus
ENSMALG00000010375	smg5	55	54.708	ENSBTAG00000009435	SMG5	99	60.641	Bos_taurus
ENSMALG00000010375	smg5	99	58.563	ENSCJAG00000005684	SMG5	99	59.644	Callithrix_jacchus
ENSMALG00000010375	smg5	99	57.833	ENSCAFG00000016839	SMG5	99	60.161	Canis_familiaris
ENSMALG00000010375	smg5	99	57.833	ENSCAFG00020006061	SMG5	99	60.161	Canis_lupus_dingo
ENSMALG00000010375	smg5	55	55.195	ENSCHIG00000007709	SMG5	99	60.641	Capra_hircus
ENSMALG00000010375	smg5	85	47.445	ENSCHIG00000006323	-	94	47.445	Capra_hircus
ENSMALG00000010375	smg5	93	75.822	ENSTSYG00000004099	SMG5	99	60.676	Carlito_syrichta
ENSMALG00000010375	smg5	95	48.123	ENSCAPG00000003631	SMG5	100	46.009	Cavia_aperea
ENSMALG00000010375	smg5	99	59.929	ENSCPOG00000015696	SMG5	99	60.963	Cavia_porcellus
ENSMALG00000010375	smg5	99	59.342	ENSCCAG00000027409	SMG5	99	59.484	Cebus_capucinus
ENSMALG00000010375	smg5	99	59.680	ENSCATG00000030539	SMG5	99	60.800	Cercocebus_atys
ENSMALG00000010375	smg5	55	54.781	ENSCLAG00000003983	SMG5	99	60.622	Chinchilla_lanigera
ENSMALG00000010375	smg5	99	59.680	ENSCSAG00000002120	SMG5	99	60.800	Chlorocebus_sabaeus
ENSMALG00000010375	smg5	51	73.835	ENSCHOG00000008741	-	57	73.835	Choloepus_hoffmanni
ENSMALG00000010375	smg5	94	59.814	ENSCPBG00000025848	SMG5	100	61.194	Chrysemys_picta_bellii
ENSMALG00000010375	smg5	75	37.562	ENSCING00000008706	-	91	37.562	Ciona_intestinalis
ENSMALG00000010375	smg5	93	75.058	ENSCANG00000029208	SMG5	99	58.096	Colobus_angolensis_palliatus
ENSMALG00000010375	smg5	99	60.823	ENSCGRG00001006336	Smg5	99	60.430	Cricetulus_griseus_chok1gshd
ENSMALG00000010375	smg5	98	60.727	ENSCGRG00000005111	Smg5	100	60.291	Cricetulus_griseus_crigri
ENSMALG00000010375	smg5	100	84.253	ENSCSEG00000014220	smg5	100	83.897	Cynoglossus_semilaevis
ENSMALG00000010375	smg5	94	77.348	ENSCVAG00000000529	smg5	99	70.125	Cyprinodon_variegatus
ENSMALG00000010375	smg5	100	75.554	ENSDARG00000041481	smg5	100	76.237	Danio_rerio
ENSMALG00000010375	smg5	72	37.766	ENSDNOG00000039862	-	87	37.766	Dasypus_novemcinctus
ENSMALG00000010375	smg5	99	57.703	ENSDNOG00000000051	SMG5	99	57.308	Dasypus_novemcinctus
ENSMALG00000010375	smg5	99	60.089	ENSDORG00000010382	Smg5	99	60.587	Dipodomys_ordii
ENSMALG00000010375	smg5	75	84.466	ENSETEG00000010336	SMG5	82	84.466	Echinops_telfairi
ENSMALG00000010375	smg5	63	51.733	ENSEBUG00000003739	smg5	88	51.733	Eptatretus_burgeri
ENSMALG00000010375	smg5	55	54.619	ENSEASG00005019122	SMG5	99	59.840	Equus_asinus_asinus
ENSMALG00000010375	smg5	55	54.619	ENSECAG00000001389	SMG5	99	59.911	Equus_caballus
ENSMALG00000010375	smg5	66	75.843	ENSEEUG00000012690	SMG5	75	75.843	Erinaceus_europaeus
ENSMALG00000010375	smg5	100	79.453	ENSELUG00000012585	smg5	100	79.152	Esox_lucius
ENSMALG00000010375	smg5	99	58.740	ENSFCAG00000011783	SMG5	99	59.176	Felis_catus
ENSMALG00000010375	smg5	59	61.862	ENSFALG00000001166	-	96	61.261	Ficedula_albicollis
ENSMALG00000010375	smg5	98	60.291	ENSFDAG00000017388	SMG5	100	60.419	Fukomys_damarensis
ENSMALG00000010375	smg5	95	76.101	ENSFHEG00000013939	smg5	96	76.498	Fundulus_heteroclitus
ENSMALG00000010375	smg5	100	75.000	ENSGMOG00000007310	smg5	100	76.091	Gadus_morhua
ENSMALG00000010375	smg5	99	61.968	ENSGALG00000029918	-	99	61.741	Gallus_gallus
ENSMALG00000010375	smg5	93	89.137	ENSGAFG00000021691	smg5	99	89.137	Gambusia_affinis
ENSMALG00000010375	smg5	100	84.854	ENSGACG00000013142	smg5	100	85.297	Gasterosteus_aculeatus
ENSMALG00000010375	smg5	99	62.060	ENSGAGG00000016131	SMG5	99	61.796	Gopherus_agassizii
ENSMALG00000010375	smg5	99	58.474	ENSGGOG00000010932	SMG5	99	60.444	Gorilla_gorilla
ENSMALG00000010375	smg5	100	87.400	ENSHBUG00000008654	smg5	100	88.110	Haplochromis_burtoni
ENSMALG00000010375	smg5	99	59.091	ENSHGLG00000019152	SMG5	99	58.897	Heterocephalus_glaber_female
ENSMALG00000010375	smg5	91	59.470	ENSHGLG00100015948	SMG5	99	59.256	Heterocephalus_glaber_male
ENSMALG00000010375	smg5	85	77.045	ENSHCOG00000010229	smg5	96	77.045	Hippocampus_comes
ENSMALG00000010375	smg5	100	76.216	ENSIPUG00000006624	Smg5	100	76.413	Ictalurus_punctatus
ENSMALG00000010375	smg5	99	59.840	ENSSTOG00000001780	SMG5	99	60.730	Ictidomys_tridecemlineatus
ENSMALG00000010375	smg5	99	60.284	ENSJJAG00000022763	Smg5	99	59.929	Jaculus_jaculus
ENSMALG00000010375	smg5	100	87.544	ENSKMAG00000014586	smg5	100	87.633	Kryptolebias_marmoratus
ENSMALG00000010375	smg5	100	88.424	ENSLBEG00000002145	smg5	100	88.424	Labrus_bergylta
ENSMALG00000010375	smg5	99	55.300	ENSLACG00000010521	SMG5	99	56.625	Latimeria_chalumnae
ENSMALG00000010375	smg5	100	67.582	ENSLOCG00000008380	smg5	99	71.534	Lepisosteus_oculatus
ENSMALG00000010375	smg5	55	54.708	ENSLAFG00000006241	SMG5	99	59.358	Loxodonta_africana
ENSMALG00000010375	smg5	99	59.680	ENSMFAG00000045357	SMG5	99	60.800	Macaca_fascicularis
ENSMALG00000010375	smg5	93	75.352	ENSMMUG00000000090	SMG5	99	60.711	Macaca_mulatta
ENSMALG00000010375	smg5	99	59.591	ENSMNEG00000044425	SMG5	99	60.711	Macaca_nemestrina
ENSMALG00000010375	smg5	99	54.867	ENSMLEG00000041192	SMG5	99	55.979	Mandrillus_leucophaeus
ENSMALG00000010375	smg5	100	89.840	ENSMAMG00000010683	smg5	100	90.820	Mastacembelus_armatus
ENSMALG00000010375	smg5	100	77.571	ENSMZEG00005015815	smg5	99	78.014	Maylandia_zebra
ENSMALG00000010375	smg5	66	75.270	ENSMZEG00005016543	smg5	100	76.757	Maylandia_zebra
ENSMALG00000010375	smg5	99	60.302	ENSMAUG00000010381	Smg5	99	60.232	Mesocricetus_auratus
ENSMALG00000010375	smg5	99	59.928	ENSMOCG00000016590	Smg5	99	60.161	Microtus_ochrogaster
ENSMALG00000010375	smg5	100	84.075	ENSMMOG00000017199	smg5	100	84.698	Mola_mola
ENSMALG00000010375	smg5	69	34.771	ENSMODG00000004735	-	86	34.771	Monodelphis_domestica
ENSMALG00000010375	smg5	76	33.264	ENSMODG00000004532	-	95	33.264	Monodelphis_domestica
ENSMALG00000010375	smg5	71	32.648	ENSMODG00000010675	-	97	32.212	Monodelphis_domestica
ENSMALG00000010375	smg5	69	34.197	ENSMODG00000004511	-	77	34.197	Monodelphis_domestica
ENSMALG00000010375	smg5	88	60.444	ENSMODG00000016901	SMG5	98	59.233	Monodelphis_domestica
ENSMALG00000010375	smg5	99	60.320	MGP_CAROLIEiJ_G0025163	Smg5	100	83.799	Mus_caroli
ENSMALG00000010375	smg5	99	60.320	ENSMUSG00000001415	Smg5	99	83.799	Mus_musculus
ENSMALG00000010375	smg5	99	60.320	MGP_PahariEiJ_G0026606	Smg5	100	84.358	Mus_pahari
ENSMALG00000010375	smg5	99	60.374	MGP_SPRETEiJ_G0026104	Smg5	100	83.799	Mus_spretus
ENSMALG00000010375	smg5	94	57.318	ENSMPUG00000004546	SMG5	100	57.750	Mustela_putorius_furo
ENSMALG00000010375	smg5	99	59.929	ENSMLUG00000008518	SMG5	99	59.450	Myotis_lucifugus
ENSMALG00000010375	smg5	77	48.205	ENSNGAG00000012101	-	91	48.205	Nannospalax_galili
ENSMALG00000010375	smg5	99	59.946	ENSNGAG00000020706	Smg5	99	60.538	Nannospalax_galili
ENSMALG00000010375	smg5	97	74.701	ENSNBRG00000004332	smg5	97	74.241	Neolamprologus_brichardi
ENSMALG00000010375	smg5	99	58.437	ENSNLEG00000012439	SMG5	99	60.284	Nomascus_leucogenys
ENSMALG00000010375	smg5	99	59.554	ENSMEUG00000012834	SMG5	99	59.018	Notamacropus_eugenii
ENSMALG00000010375	smg5	99	60.515	ENSOPRG00000009152	SMG5	99	60.889	Ochotona_princeps
ENSMALG00000010375	smg5	99	59.682	ENSODEG00000012237	SMG5	99	60.536	Octodon_degus
ENSMALG00000010375	smg5	100	88.267	ENSONIG00000008632	smg5	100	88.622	Oreochromis_niloticus
ENSMALG00000010375	smg5	79	41.667	ENSOCUG00000023338	-	88	41.667	Oryctolagus_cuniculus
ENSMALG00000010375	smg5	98	60.290	ENSOCUG00000012886	SMG5	100	59.982	Oryctolagus_cuniculus
ENSMALG00000010375	smg5	100	82.102	ENSORLG00000016239	smg5	100	83.052	Oryzias_latipes
ENSMALG00000010375	smg5	100	82.012	ENSORLG00020013127	smg5	100	83.304	Oryzias_latipes_hni
ENSMALG00000010375	smg5	100	82.012	ENSORLG00015019014	smg5	100	83.126	Oryzias_latipes_hsok
ENSMALG00000010375	smg5	84	82.447	ENSOMEG00000021330	smg5	93	82.555	Oryzias_melastigma
ENSMALG00000010375	smg5	55	53.896	ENSOGAG00000004966	SMG5	99	59.750	Otolemur_garnettii
ENSMALG00000010375	smg5	86	47.857	ENSOARG00000011963	-	94	47.857	Ovis_aries
ENSMALG00000010375	smg5	55	54.870	ENSOARG00000005778	SMG5	99	60.641	Ovis_aries
ENSMALG00000010375	smg5	99	59.325	ENSPPAG00000011996	SMG5	99	60.444	Pan_paniscus
ENSMALG00000010375	smg5	98	58.559	ENSPPRG00000011901	SMG5	100	59.128	Panthera_pardus
ENSMALG00000010375	smg5	97	56.382	ENSPTIG00000007892	SMG5	98	56.606	Panthera_tigris_altaica
ENSMALG00000010375	smg5	99	59.325	ENSPTRG00000023925	SMG5	99	60.444	Pan_troglodytes
ENSMALG00000010375	smg5	86	75.070	ENSPTRG00000049282	-	86	75.070	Pan_troglodytes
ENSMALG00000010375	smg5	99	59.680	ENSPANG00000011201	SMG5	99	60.800	Papio_anubis
ENSMALG00000010375	smg5	100	75.089	ENSPKIG00000009402	smg5	100	75.268	Paramormyrops_kingsleyae
ENSMALG00000010375	smg5	98	62.444	ENSPSIG00000015198	SMG5	100	62.140	Pelodiscus_sinensis
ENSMALG00000010375	smg5	100	71.352	ENSPMGG00000010465	smg5	100	71.251	Periophthalmus_magnuspinnatus
ENSMALG00000010375	smg5	99	60.465	ENSPEMG00000001819	Smg5	99	60.268	Peromyscus_maniculatus_bairdii
ENSMALG00000010375	smg5	84	59.360	ENSPMAG00000000410	smg5	99	45.782	Petromyzon_marinus
ENSMALG00000010375	smg5	99	59.552	ENSPCIG00000018938	SMG5	99	60.000	Phascolarctos_cinereus
ENSMALG00000010375	smg5	100	84.938	ENSPFOG00000010191	smg5	100	85.116	Poecilia_formosa
ENSMALG00000010375	smg5	100	84.938	ENSPLAG00000009332	smg5	100	85.116	Poecilia_latipinna
ENSMALG00000010375	smg5	100	84.848	ENSPMEG00000014105	smg5	100	85.027	Poecilia_mexicana
ENSMALG00000010375	smg5	100	85.561	ENSPREG00000017713	smg5	100	85.740	Poecilia_reticulata
ENSMALG00000010375	smg5	99	59.414	ENSPPYG00000000723	SMG5	99	60.533	Pongo_abelii
ENSMALG00000010375	smg5	70	78.333	ENSPCAG00000008412	SMG5	81	78.333	Procavia_capensis
ENSMALG00000010375	smg5	55	54.207	ENSPCOG00000004741	SMG5	99	59.554	Propithecus_coquereli
ENSMALG00000010375	smg5	93	62.383	ENSPVAG00000016748	SMG5	99	53.422	Pteropus_vampyrus
ENSMALG00000010375	smg5	100	87.003	ENSPNYG00000013397	smg5	100	87.710	Pundamilia_nyererei
ENSMALG00000010375	smg5	100	76.738	ENSPNAG00000028363	smg5	100	77.442	Pygocentrus_nattereri
ENSMALG00000010375	smg5	99	59.964	ENSRNOG00000019590	Smg5	99	59.394	Rattus_norvegicus
ENSMALG00000010375	smg5	99	59.644	ENSRBIG00000027428	SMG5	99	60.765	Rhinopithecus_bieti
ENSMALG00000010375	smg5	99	59.556	ENSRROG00000030035	SMG5	99	60.676	Rhinopithecus_roxellana
ENSMALG00000010375	smg5	99	59.698	ENSSBOG00000033339	SMG5	99	59.840	Saimiri_boliviensis_boliviensis
ENSMALG00000010375	smg5	68	36.410	ENSSHAG00000000561	-	84	36.410	Sarcophilus_harrisii
ENSMALG00000010375	smg5	75	36.596	ENSSHAG00000009572	-	86	36.596	Sarcophilus_harrisii
ENSMALG00000010375	smg5	50	35.897	ENSSHAG00000000935	-	79	35.897	Sarcophilus_harrisii
ENSMALG00000010375	smg5	98	59.892	ENSSHAG00000014163	SMG5	100	59.765	Sarcophilus_harrisii
ENSMALG00000010375	smg5	94	84.954	ENSSFOG00015024175	smg5	100	76.372	Scleropages_formosus
ENSMALG00000010375	smg5	100	87.811	ENSSMAG00000013059	smg5	100	88.800	Scophthalmus_maximus
ENSMALG00000010375	smg5	100	89.832	ENSSDUG00000007122	smg5	100	90.893	Seriola_dumerili
ENSMALG00000010375	smg5	100	89.973	ENSSLDG00000011418	smg5	100	91.127	Seriola_lalandi_dorsalis
ENSMALG00000010375	smg5	78	68.345	ENSSARG00000012484	SMG5	94	68.345	Sorex_araneus
ENSMALG00000010375	smg5	94	61.059	ENSSPUG00000002260	SMG5	100	60.688	Sphenodon_punctatus
ENSMALG00000010375	smg5	100	89.716	ENSSPAG00000014266	smg5	100	89.805	Stegastes_partitus
ENSMALG00000010375	smg5	93	69.626	ENSSSCG00000006490	-	100	59.906	Sus_scrofa
ENSMALG00000010375	smg5	99	46.037	ENSSSCG00000039308	-	99	46.270	Sus_scrofa
ENSMALG00000010375	smg5	99	62.567	ENSTGUG00000003748	-	99	61.977	Taeniopygia_guttata
ENSMALG00000010375	smg5	100	79.735	ENSTRUG00000012580	smg5	100	80.354	Takifugu_rubripes
ENSMALG00000010375	smg5	100	79.982	ENSTNIG00000010303	smg5	100	80.159	Tetraodon_nigroviridis
ENSMALG00000010375	smg5	52	80.296	ENSTBEG00000002777	SMG5	58	80.296	Tupaia_belangeri
ENSMALG00000010375	smg5	99	55.605	ENSTTRG00000001401	SMG5	99	56.100	Tursiops_truncatus
ENSMALG00000010375	smg5	99	58.482	ENSUAMG00000013721	SMG5	99	58.608	Ursus_americanus
ENSMALG00000010375	smg5	91	75.000	ENSUMAG00000018041	SMG5	99	69.820	Ursus_maritimus
ENSMALG00000010375	smg5	54	70.297	ENSVPAG00000009446	SMG5	99	53.769	Vicugna_pacos
ENSMALG00000010375	smg5	99	59.445	ENSVVUG00000005887	SMG5	99	59.034	Vulpes_vulpes
ENSMALG00000010375	smg5	79	52.573	ENSXETG00000033791	SMG5	99	52.009	Xenopus_tropicalis
ENSMALG00000010375	smg5	91	91.892	ENSXCOG00000004379	smg5	100	91.892	Xiphophorus_couchianus
ENSMALG00000010375	smg5	100	85.116	ENSXMAG00000013499	smg5	100	85.294	Xiphophorus_maculatus