EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000010597 (Gene tree)
Gene ID: 109960891
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 19035 bases
Position: chrKV884739.1:3431809-3450843
Accession: 109960891
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000015111	RRM_1	PF00076.22	5.1e-05	1	1
ENSMALP00000015094	RRM_1	PF00076.22	5.8e-05	1	1
ENSMALP00000015111	G-patch	PF01585.23	4.4e-13	1	1
ENSMALP00000015094	G-patch	PF01585.23	4.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000015402	-	2473	XM_020601318	ENSMALP00000015094	422 (aa)	XP_020456974	UPI0009B35C97
ENSMALT00000015419	-	1167	-	ENSMALP00000015111	388 (aa)	-	-

Gene Model

Click here to download ENSMALG00000010597's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000010597's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000010597	rbm17	100	77.941	ENSG00000134453	RBM17	100	77.882	Homo_sapiens
ENSMALG00000010597	rbm17	99	95.215	ENSAPOG00000007101	rbm17	99	94.498	Acanthochromis_polyacanthus
ENSMALG00000010597	rbm17	100	78.186	ENSAMEG00000002107	RBM17	100	78.118	Ailuropoda_melanoleuca
ENSMALG00000010597	rbm17	100	89.136	ENSACIG00000006251	rbm17	100	89.136	Amphilophus_citrinellus
ENSMALG00000010597	rbm17	100	95.024	ENSAOCG00000014892	rbm17	100	94.313	Amphiprion_ocellaris
ENSMALG00000010597	rbm17	100	95.024	ENSAPEG00000022779	rbm17	100	94.313	Amphiprion_percula
ENSMALG00000010597	rbm17	100	93.839	ENSATEG00000004406	rbm17	100	92.417	Anabas_testudineus
ENSMALG00000010597	rbm17	100	79.529	ENSAPLG00000004190	RBM17	100	79.529	Anas_platyrhynchos
ENSMALG00000010597	rbm17	90	75.385	ENSACAG00000005418	RBM17	99	75.385	Anolis_carolinensis
ENSMALG00000010597	rbm17	100	78.304	ENSANAG00000030127	RBM17	98	85.124	Aotus_nancymaae
ENSMALG00000010597	rbm17	100	72.457	ENSANAG00000019330	-	95	83.621	Aotus_nancymaae
ENSMALG00000010597	rbm17	100	89.924	ENSACLG00000003928	rbm17	100	89.673	Astatotilapia_calliptera
ENSMALG00000010597	rbm17	100	84.906	ENSAMXG00000005853	rbm17	100	84.906	Astyanax_mexicanus
ENSMALG00000010597	rbm17	100	77.412	ENSBTAG00000011094	-	100	77.412	Bos_taurus
ENSMALG00000010597	rbm17	100	78.431	ENSBTAG00000021951	RBM17	100	78.353	Bos_taurus
ENSMALG00000010597	rbm17	91	34.037	WBGene00010233	F58B3.7	91	32.620	Caenorhabditis_elegans
ENSMALG00000010597	rbm17	100	80.353	ENSCJAG00000020573	RBM17	100	79.442	Callithrix_jacchus
ENSMALG00000010597	rbm17	100	78.186	ENSCAFG00000005206	RBM17	100	78.118	Canis_familiaris
ENSMALG00000010597	rbm17	100	80.759	ENSCAFG00020005420	RBM17	100	79.592	Canis_lupus_dingo
ENSMALG00000010597	rbm17	100	82.005	ENSCHIG00000023204	-	100	82.005	Capra_hircus
ENSMALG00000010597	rbm17	100	76.235	ENSCHIG00000019921	-	100	76.000	Capra_hircus
ENSMALG00000010597	rbm17	100	78.118	ENSTSYG00000001165	RBM17	99	86.441	Carlito_syrichta
ENSMALG00000010597	rbm17	96	66.133	ENSCAPG00000006275	RBM17	100	69.972	Cavia_aperea
ENSMALG00000010597	rbm17	100	80.867	ENSCPOG00000005679	RBM17	99	80.867	Cavia_porcellus
ENSMALG00000010597	rbm17	100	78.186	ENSCCAG00000018655	RBM17	98	85.124	Cebus_capucinus
ENSMALG00000010597	rbm17	100	81.491	ENSCATG00000041566	RBM17	97	85.833	Cercocebus_atys
ENSMALG00000010597	rbm17	100	78.118	ENSCLAG00000012195	RBM17	99	78.118	Chinchilla_lanigera
ENSMALG00000010597	rbm17	100	77.941	ENSCSAG00000013564	RBM17	100	77.882	Chlorocebus_sabaeus
ENSMALG00000010597	rbm17	93	60.914	ENSCHOG00000005131	RBM17	100	60.914	Choloepus_hoffmanni
ENSMALG00000010597	rbm17	100	78.118	ENSCPBG00000019836	RBM17	100	78.118	Chrysemys_picta_bellii
ENSMALG00000010597	rbm17	100	43.678	ENSCSAVG00000008782	-	100	44.836	Ciona_savignyi
ENSMALG00000010597	rbm17	100	77.970	ENSCANG00000030987	RBM17	97	85.833	Colobus_angolensis_palliatus
ENSMALG00000010597	rbm17	97	74.339	ENSCANG00000023715	-	99	72.751	Colobus_angolensis_palliatus
ENSMALG00000010597	rbm17	100	66.240	ENSCGRG00001009256	-	100	63.158	Cricetulus_griseus_chok1gshd
ENSMALG00000010597	rbm17	100	78.353	ENSCGRG00001013842	Rbm17	100	78.353	Cricetulus_griseus_chok1gshd
ENSMALG00000010597	rbm17	100	78.353	ENSCGRG00000006907	Rbm17	100	78.353	Cricetulus_griseus_crigri
ENSMALG00000010597	rbm17	100	87.234	ENSCSEG00000018164	rbm17	100	85.816	Cynoglossus_semilaevis
ENSMALG00000010597	rbm17	100	87.532	ENSCVAG00000002476	rbm17	100	87.786	Cyprinodon_variegatus
ENSMALG00000010597	rbm17	100	78.454	ENSDARG00000031346	rbm17	100	80.094	Danio_rerio
ENSMALG00000010597	rbm17	100	77.882	ENSDNOG00000035920	RBM17	100	77.882	Dasypus_novemcinctus
ENSMALG00000010597	rbm17	99	38.353	FBgn0086683	Spf45	99	37.915	Drosophila_melanogaster
ENSMALG00000010597	rbm17	89	83.412	ENSETEG00000006642	RBM17	85	84.058	Echinops_telfairi
ENSMALG00000010597	rbm17	64	66.667	ENSEBUG00000010253	rbm17	84	66.667	Eptatretus_burgeri
ENSMALG00000010597	rbm17	100	80.916	ENSEASG00005019205	-	100	80.916	Equus_asinus_asinus
ENSMALG00000010597	rbm17	93	75.635	ENSEASG00005009236	-	100	74.873	Equus_asinus_asinus
ENSMALG00000010597	rbm17	100	73.522	ENSECAG00000008939	RBM17	100	73.779	Equus_caballus
ENSMALG00000010597	rbm17	100	69.647	ENSECAG00000001379	-	100	68.941	Equus_caballus
ENSMALG00000010597	rbm17	86	61.957	ENSEEUG00000013077	RBM17	100	61.957	Erinaceus_europaeus
ENSMALG00000010597	rbm17	100	86.047	ENSELUG00000006440	rbm17	100	86.047	Esox_lucius
ENSMALG00000010597	rbm17	100	78.186	ENSFCAG00000031988	RBM17	100	78.118	Felis_catus
ENSMALG00000010597	rbm17	100	78.353	ENSFALG00000001790	RBM17	100	78.353	Ficedula_albicollis
ENSMALG00000010597	rbm17	100	78.118	ENSFDAG00000007470	RBM17	100	78.118	Fukomys_damarensis
ENSMALG00000010597	rbm17	100	90.995	ENSFHEG00000001266	rbm17	100	88.660	Fundulus_heteroclitus
ENSMALG00000010597	rbm17	99	81.473	ENSGMOG00000008438	rbm17	100	80.523	Gadus_morhua
ENSMALG00000010597	rbm17	100	79.294	ENSGALG00000006332	RBM17	100	79.294	Gallus_gallus
ENSMALG00000010597	rbm17	100	88.579	ENSGAFG00000019879	rbm17	100	88.579	Gambusia_affinis
ENSMALG00000010597	rbm17	99	89.810	ENSGACG00000019174	rbm17	99	88.389	Gasterosteus_aculeatus
ENSMALG00000010597	rbm17	100	78.118	ENSGAGG00000019906	RBM17	100	78.118	Gopherus_agassizii
ENSMALG00000010597	rbm17	100	93.128	ENSHBUG00000016624	rbm17	100	92.417	Haplochromis_burtoni
ENSMALG00000010597	rbm17	100	78.118	ENSHGLG00000011580	RBM17	100	78.118	Heterocephalus_glaber_female
ENSMALG00000010597	rbm17	100	78.118	ENSHGLG00100010460	RBM17	100	78.118	Heterocephalus_glaber_male
ENSMALG00000010597	rbm17	100	66.247	ENSHGLG00100010556	-	100	63.728	Heterocephalus_glaber_male
ENSMALG00000010597	rbm17	99	86.905	ENSHCOG00000010865	rbm17	100	86.667	Hippocampus_comes
ENSMALG00000010597	rbm17	100	83.333	ENSIPUG00000007699	Rbm17	100	83.960	Ictalurus_punctatus
ENSMALG00000010597	rbm17	100	78.353	ENSSTOG00000013591	RBM17	100	78.353	Ictidomys_tridecemlineatus
ENSMALG00000010597	rbm17	100	78.353	ENSJJAG00000022886	Rbm17	100	78.353	Jaculus_jaculus
ENSMALG00000010597	rbm17	100	57.882	ENSJJAG00000000993	-	100	56.235	Jaculus_jaculus
ENSMALG00000010597	rbm17	100	90.995	ENSKMAG00000021400	rbm17	100	89.810	Kryptolebias_marmoratus
ENSMALG00000010597	rbm17	100	92.654	ENSLBEG00000000881	rbm17	100	91.943	Labrus_bergylta
ENSMALG00000010597	rbm17	99	66.200	ENSLACG00000017297	RBM17	99	65.668	Latimeria_chalumnae
ENSMALG00000010597	rbm17	100	80.751	ENSLOCG00000015659	rbm17	100	80.140	Lepisosteus_oculatus
ENSMALG00000010597	rbm17	100	78.118	ENSLAFG00000011629	RBM17	100	78.118	Loxodonta_africana
ENSMALG00000010597	rbm17	100	81.491	ENSMFAG00000035521	RBM17	97	85.833	Macaca_fascicularis
ENSMALG00000010597	rbm17	100	77.941	ENSMMUG00000015152	RBM17	97	85.833	Macaca_mulatta
ENSMALG00000010597	rbm17	100	81.491	ENSMNEG00000017264	RBM17	97	85.833	Macaca_nemestrina
ENSMALG00000010597	rbm17	100	81.491	ENSMLEG00000029340	RBM17	97	85.833	Mandrillus_leucophaeus
ENSMALG00000010597	rbm17	100	94.550	ENSMAMG00000000387	rbm17	100	93.128	Mastacembelus_armatus
ENSMALG00000010597	rbm17	100	93.128	ENSMZEG00005015179	rbm17	100	92.417	Maylandia_zebra
ENSMALG00000010597	rbm17	100	78.923	ENSMGAG00000003981	RBM17	100	78.923	Meleagris_gallopavo
ENSMALG00000010597	rbm17	100	78.353	ENSMAUG00000019247	Rbm17	100	78.353	Mesocricetus_auratus
ENSMALG00000010597	rbm17	100	72.535	ENSMICG00000041489	-	100	72.535	Microcebus_murinus
ENSMALG00000010597	rbm17	100	78.353	ENSMICG00000003976	-	100	78.353	Microcebus_murinus
ENSMALG00000010597	rbm17	92	65.489	ENSMOCG00000014517	-	99	64.946	Microtus_ochrogaster
ENSMALG00000010597	rbm17	100	78.353	ENSMOCG00000011847	Rbm17	100	78.353	Microtus_ochrogaster
ENSMALG00000010597	rbm17	100	84.390	ENSMMOG00000010264	rbm17	100	81.174	Mola_mola
ENSMALG00000010597	rbm17	100	77.696	ENSMODG00000016648	RBM17	100	77.647	Monodelphis_domestica
ENSMALG00000010597	rbm17	100	78.353	MGP_CAROLIEiJ_G0023173	Rbm17	100	78.353	Mus_caroli
ENSMALG00000010597	rbm17	100	78.353	ENSMUSG00000037197	Rbm17	100	78.353	Mus_musculus
ENSMALG00000010597	rbm17	100	78.588	MGP_PahariEiJ_G0019233	Rbm17	100	78.588	Mus_pahari
ENSMALG00000010597	rbm17	100	78.353	MGP_SPRETEiJ_G0024091	Rbm17	100	78.353	Mus_spretus
ENSMALG00000010597	rbm17	86	75.815	ENSMPUG00000016359	RBM17	96	75.815	Mustela_putorius_furo
ENSMALG00000010597	rbm17	100	76.761	ENSMLUG00000002302	-	100	76.761	Myotis_lucifugus
ENSMALG00000010597	rbm17	100	75.000	ENSMLUG00000025709	-	100	74.824	Myotis_lucifugus
ENSMALG00000010597	rbm17	100	78.353	ENSNGAG00000000741	Rbm17	100	78.353	Nannospalax_galili
ENSMALG00000010597	rbm17	100	58.612	ENSNGAG00000000663	-	100	58.718	Nannospalax_galili
ENSMALG00000010597	rbm17	100	88.660	ENSNBRG00000018148	rbm17	100	88.918	Neolamprologus_brichardi
ENSMALG00000010597	rbm17	100	78.500	ENSNLEG00000033350	RBM17	97	85.833	Nomascus_leucogenys
ENSMALG00000010597	rbm17	100	72.706	ENSMEUG00000011347	RBM17	100	72.706	Notamacropus_eugenii
ENSMALG00000010597	rbm17	100	68.305	ENSOPRG00000002993	RBM17	100	68.000	Ochotona_princeps
ENSMALG00000010597	rbm17	97	61.340	ENSODEG00000007286	-	99	59.611	Octodon_degus
ENSMALG00000010597	rbm17	100	78.169	ENSODEG00000004393	RBM17	100	78.169	Octodon_degus
ENSMALG00000010597	rbm17	100	90.758	ENSONIG00000011838	rbm17	100	90.047	Oreochromis_niloticus
ENSMALG00000010597	rbm17	100	77.995	ENSOANG00000015455	RBM17	100	78.118	Ornithorhynchus_anatinus
ENSMALG00000010597	rbm17	100	90.995	ENSORLG00000028798	rbm17	100	89.810	Oryzias_latipes
ENSMALG00000010597	rbm17	100	90.979	ENSORLG00020004593	rbm17	100	88.660	Oryzias_latipes_hni
ENSMALG00000010597	rbm17	100	90.758	ENSORLG00015000033	rbm17	99	89.573	Oryzias_latipes_hsok
ENSMALG00000010597	rbm17	100	91.232	ENSOMEG00000012060	rbm17	100	92.500	Oryzias_melastigma
ENSMALG00000010597	rbm17	100	78.588	ENSOGAG00000015687	RBM17	100	78.588	Otolemur_garnettii
ENSMALG00000010597	rbm17	100	78.431	ENSOARG00000012975	RBM17	100	78.353	Ovis_aries
ENSMALG00000010597	rbm17	100	78.378	ENSPPAG00000032347	RBM17	97	85.833	Pan_paniscus
ENSMALG00000010597	rbm17	100	78.186	ENSPPRG00000010706	RBM17	100	78.118	Panthera_pardus
ENSMALG00000010597	rbm17	100	78.186	ENSPTIG00000007596	RBM17	100	78.118	Panthera_tigris_altaica
ENSMALG00000010597	rbm17	100	78.378	ENSPTRG00000002265	RBM17	97	85.833	Pan_troglodytes
ENSMALG00000010597	rbm17	100	81.491	ENSPANG00000023425	RBM17	97	85.833	Papio_anubis
ENSMALG00000010597	rbm17	100	80.612	ENSPKIG00000005048	-	100	80.563	Paramormyrops_kingsleyae
ENSMALG00000010597	rbm17	100	81.524	ENSPKIG00000025526	rbm17	100	81.308	Paramormyrops_kingsleyae
ENSMALG00000010597	rbm17	100	77.804	ENSPSIG00000012332	RBM17	100	77.804	Pelodiscus_sinensis
ENSMALG00000010597	rbm17	100	83.750	ENSPMGG00000007980	rbm17	100	83.500	Periophthalmus_magnuspinnatus
ENSMALG00000010597	rbm17	100	78.353	ENSPEMG00000014320	Rbm17	100	78.353	Peromyscus_maniculatus_bairdii
ENSMALG00000010597	rbm17	100	77.317	ENSPCIG00000019260	-	100	77.283	Phascolarctos_cinereus
ENSMALG00000010597	rbm17	100	91.469	ENSPFOG00000013271	rbm17	100	90.284	Poecilia_formosa
ENSMALG00000010597	rbm17	100	90.995	ENSPLAG00000004455	rbm17	100	89.810	Poecilia_latipinna
ENSMALG00000010597	rbm17	100	91.469	ENSPMEG00000014864	rbm17	100	90.284	Poecilia_mexicana
ENSMALG00000010597	rbm17	100	91.706	ENSPREG00000015589	rbm17	100	90.521	Poecilia_reticulata
ENSMALG00000010597	rbm17	99	60.546	ENSPPYG00000019881	-	100	59.811	Pongo_abelii
ENSMALG00000010597	rbm17	100	77.941	ENSPPYG00000002067	RBM17	100	77.882	Pongo_abelii
ENSMALG00000010597	rbm17	82	56.936	ENSPPYG00000019042	-	100	58.360	Pongo_abelii
ENSMALG00000010597	rbm17	100	70.824	ENSPCAG00000016879	RBM17	100	70.824	Procavia_capensis
ENSMALG00000010597	rbm17	100	80.000	ENSPCOG00000027881	RBM17	100	79.747	Propithecus_coquereli
ENSMALG00000010597	rbm17	100	70.896	ENSPVAG00000015499	RBM17	100	70.647	Pteropus_vampyrus
ENSMALG00000010597	rbm17	100	85.825	ENSPNYG00000015274	rbm17	100	84.910	Pundamilia_nyererei
ENSMALG00000010597	rbm17	100	84.434	ENSPNAG00000030046	rbm17	100	84.434	Pygocentrus_nattereri
ENSMALG00000010597	rbm17	100	78.353	ENSRNOG00000018767	Rbm17	100	78.353	Rattus_norvegicus
ENSMALG00000010597	rbm17	100	78.908	ENSRBIG00000043727	RBM17	97	85.833	Rhinopithecus_bieti
ENSMALG00000010597	rbm17	100	81.491	ENSRROG00000044142	RBM17	97	85.833	Rhinopithecus_roxellana
ENSMALG00000010597	rbm17	100	69.412	ENSSBOG00000023653	-	100	69.412	Saimiri_boliviensis_boliviensis
ENSMALG00000010597	rbm17	100	79.442	ENSSBOG00000031661	-	91	88.496	Saimiri_boliviensis_boliviensis
ENSMALG00000010597	rbm17	100	78.353	ENSSHAG00000012480	-	100	78.353	Sarcophilus_harrisii
ENSMALG00000010597	rbm17	100	81.265	ENSSFOG00015009892	rbm17	100	81.265	Scleropages_formosus
ENSMALG00000010597	rbm17	100	88.974	ENSSMAG00000012368	rbm17	100	87.404	Scophthalmus_maximus
ENSMALG00000010597	rbm17	100	95.103	ENSSDUG00000015015	rbm17	100	92.010	Seriola_dumerili
ENSMALG00000010597	rbm17	100	95.103	ENSSLDG00000014486	rbm17	100	92.010	Seriola_lalandi_dorsalis
ENSMALG00000010597	rbm17	50	73.874	ENSSARG00000001792	-	79	73.874	Sorex_araneus
ENSMALG00000010597	rbm17	99	78.302	ENSSPUG00000001036	RBM17	99	78.302	Sphenodon_punctatus
ENSMALG00000010597	rbm17	100	95.261	ENSSPAG00000002338	rbm17	100	93.839	Stegastes_partitus
ENSMALG00000010597	rbm17	100	78.186	ENSSSCG00000011134	RBM17	100	78.118	Sus_scrofa
ENSMALG00000010597	rbm17	100	78.588	ENSTGUG00000002013	RBM17	100	78.588	Taeniopygia_guttata
ENSMALG00000010597	rbm17	100	89.810	ENSTRUG00000010698	rbm17	100	88.863	Takifugu_rubripes
ENSMALG00000010597	rbm17	100	88.863	ENSTNIG00000006892	rbm17	100	87.915	Tetraodon_nigroviridis
ENSMALG00000010597	rbm17	100	61.728	ENSTBEG00000014686	RBM17	100	62.716	Tupaia_belangeri
ENSMALG00000010597	rbm17	90	76.823	ENSTTRG00000001344	RBM17	100	76.823	Tursiops_truncatus
ENSMALG00000010597	rbm17	100	79.545	ENSUAMG00000009499	RBM17	100	79.293	Ursus_americanus
ENSMALG00000010597	rbm17	100	81.748	ENSUMAG00000012237	RBM17	100	81.748	Ursus_maritimus
ENSMALG00000010597	rbm17	100	69.900	ENSVPAG00000005497	RBM17	85	88.889	Vicugna_pacos
ENSMALG00000010597	rbm17	100	80.759	ENSVVUG00000006780	RBM17	100	79.592	Vulpes_vulpes
ENSMALG00000010597	rbm17	99	74.815	ENSXETG00000018123	rbm17	100	74.408	Xenopus_tropicalis
ENSMALG00000010597	rbm17	100	90.758	ENSXMAG00000008674	rbm17	100	89.573	Xiphophorus_maculatus