EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000010962 (Gene tree)
Gene ID: 109970254
Gene Symbol: -
Alias: -
Full Name: zinc finger and SCAN domain-containing protein 2-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 2233 bases
Position: chrKV884881.1:234670-236902
Accession: 109970254
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000015599	zf-C2H2	PF00096.26	1.3e-17	1	3
ENSMALP00000015599	zf-C2H2	PF00096.26	1.3e-17	2	3
ENSMALP00000015599	zf-C2H2	PF00096.26	1.3e-17	3	3
ENSMALP00000015599	zf-met	PF12874.7	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000015913	-	1329	XM_020617682	ENSMALP00000015599	442 (aa)	XP_020473338	UPI0009B4CE01

Gene Model

Click here to download ENSMALG00000010962's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000010962's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000010962	-	55	44.715	ENSMALG00000011756	-	67	47.368
ENSMALG00000010962	-	55	53.846	ENSMALG00000005239	-	90	53.448
ENSMALG00000010962	-	73	55.372	ENSMALG00000013323	-	83	53.719
ENSMALG00000010962	-	63	40.288	ENSMALG00000011720	-	88	47.500
ENSMALG00000010962	-	64	51.969	ENSMALG00000014911	-	68	51.969

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000010962	-	61	52.941	ENSDARG00000115857	znf1001	96	52.941	Danio_rerio
ENSMALG00000010962	-	61	48.800	ENSDARG00000103777	znf1001	98	48.800	Danio_rerio
ENSMALG00000010962	-	98	43.852	ENSELUG00000017412	-	99	43.648	Esox_lucius
ENSMALG00000010962	-	99	49.333	ENSORLG00020019341	-	86	79.592	Oryzias_latipes_hni
ENSMALG00000010962	-	99	45.614	ENSPMEG00000007573	zgc:113343	62	45.614	Poecilia_mexicana