EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMALG00000011017 (Gene tree)
Gene ID
109964928
Gene Symbol
pabpc4
Alias
cb12|sb:cb12
Full Name
polyadenylate-binding protein 4-like
Gene Type
protein_coding
Species
Monopterus_albus
Status
putative
Strand
Plus strand
Length
8388 bases
Position
chrKV884782.1:879412-887799
Accession
109964928
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMALP00000015697PABPPF00658.186.7e-3111
ENSMALP00000015697RRM_5PF13893.61.4e-0911
ENSMALP00000015697RRM_1PF00076.221e-9014
ENSMALP00000015697RRM_1PF00076.221e-9024
ENSMALP00000015697RRM_1PF00076.221e-9034
ENSMALP00000015697RRM_1PF00076.221e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMALT00000016012-2403XM_020608544ENSMALP00000015697629 (aa)XP_020464200UPI0009B41750
Gene Model
Click here to download ENSMALG00000011017's gene model file
Pathways
Pathway IDPathway NameSource
malb03013RNA transportKEGG
malb03015mRNA surveillance pathwayKEGG
malb03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000011017's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMALG00000011017pabpc45131.646ENSMALG00000016791-6931.646
ENSMALG00000011017pabpc49566.124ENSMALG00000021622pabpc1l10065.635
ENSMALG00000011017pabpc45833.113ENSMALG00000021265-8530.055
ENSMALG00000011017pabpc45731.875ENSMALG00000019079-9732.667
ENSMALG00000011017pabpc45730.380ENSMALG00000016778trnau1apa6630.380
ENSMALG00000011017pabpc45238.636ENSMALG00000011132-7738.636
ENSMALG00000011017pabpc45933.684ENSMALG00000009155-5133.684
ENSMALG00000011017pabpc45836.145ENSMALG00000003411elavl28236.145
ENSMALG00000011017pabpc45936.145ENSMALG00000016659elavl39036.145
ENSMALG00000011017pabpc45633.333ENSMALG00000022126rbm459533.333
ENSMALG00000011017pabpc46033.010ENSMALG00000019536RBMS35533.010
ENSMALG00000011017pabpc45237.500ENSMALG00000000961-5237.500
ENSMALG00000011017pabpc45934.737ENSMALG00000016900rbms2a5333.981
ENSMALG00000011017pabpc45934.940ENSMALG00000016432elavl48434.940
ENSMALG00000011017pabpc49876.070ENSMALG00000013020-9876.090
ENSMALG00000011017pabpc46338.636ENSMALG00000012778-6535.714
ENSMALG00000011017pabpc49875.000ENSMALG00000006066pabpc1b9874.157
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMALG00000011017pabpc410084.286ENSG00000090621PABPC49996.396Homo_sapiens
ENSMALG00000011017pabpc410097.138ENSAPOG00000001161pabpc410097.138Acanthochromis_polyacanthus
ENSMALG00000011017pabpc49850.081ENSAMEG00000015083-9848.706Ailuropoda_melanoleuca
ENSMALG00000011017pabpc410079.434ENSAMEG00000011535-9979.154Ailuropoda_melanoleuca
ENSMALG00000011017pabpc410096.057ENSACIG00000023343pabpc410096.057Amphilophus_citrinellus
ENSMALG00000011017pabpc410097.297ENSAOCG00000021529pabpc410097.297Amphiprion_ocellaris
ENSMALG00000011017pabpc410097.297ENSAPEG00000019196pabpc410097.297Amphiprion_percula
ENSMALG00000011017pabpc410098.095ENSATEG00000007402pabpc410098.095Anabas_testudineus
ENSMALG00000011017pabpc49984.929ENSAPLG00000009729-9984.945Anas_platyrhynchos
ENSMALG00000011017pabpc49884.099ENSACAG00000002544PABPC49983.393Anolis_carolinensis
ENSMALG00000011017pabpc410082.326ENSANAG00000025079PABPC49982.780Aotus_nancymaae
ENSMALG00000011017pabpc410097.138ENSACLG00000019558pabpc410097.138Astatotilapia_calliptera
ENSMALG00000011017pabpc49985.940ENSAMXG00000018779pabpc49886.538Astyanax_mexicanus
ENSMALG00000011017pabpc410081.098ENSBTAG00000017125PABPC49980.989Bos_taurus
ENSMALG00000011017pabpc45884.431ENSBTAG00000048536-9384.431Bos_taurus
ENSMALG00000011017pabpc47480.804ENSCJAG00000045953-8579.018Callithrix_jacchus
ENSMALG00000011017pabpc410082.326ENSCJAG00000002512-9982.780Callithrix_jacchus
ENSMALG00000011017pabpc410082.481ENSCAFG00000003081PABPC49982.780Canis_familiaris
ENSMALG00000011017pabpc410079.583ENSCAFG00020004161PABPC49979.305Canis_lupus_dingo
ENSMALG00000011017pabpc410079.136ENSCHIG00000019398-9979.003Capra_hircus
ENSMALG00000011017pabpc410065.538ENSCHIG00000023385-9965.415Capra_hircus
ENSMALG00000011017pabpc410083.022ENSTSYG00000006532PABPC49982.780Carlito_syrichta
ENSMALG00000011017pabpc49981.988ENSCAPG00000015984PABPC49982.409Cavia_aperea
ENSMALG00000011017pabpc410081.762ENSCPOG00000009552PABPC49982.780Cavia_porcellus
ENSMALG00000011017pabpc410082.481ENSCCAG00000037306PABPC49982.938Cebus_capucinus
ENSMALG00000011017pabpc410082.326ENSCATG00000042164PABPC49982.780Cercocebus_atys
ENSMALG00000011017pabpc410082.071ENSCLAG00000011899PABPC49982.780Chinchilla_lanigera
ENSMALG00000011017pabpc410079.285ENSCSAG00000001135PABPC49979.154Chlorocebus_sabaeus
ENSMALG00000011017pabpc48688.947ENSCHOG00000005327PABPC47989.488Choloepus_hoffmanni
ENSMALG00000011017pabpc49985.557ENSCPBG00000001038PABPC49985.578Chrysemys_picta_bellii
ENSMALG00000011017pabpc49982.547ENSCANG00000034177PABPC49983.013Colobus_angolensis_palliatus
ENSMALG00000011017pabpc49884.927ENSCGRG00001018166Pabpc49884.491Cricetulus_griseus_chok1gshd
ENSMALG00000011017pabpc49785.197ENSCGRG00000009777Pabpc49884.754Cricetulus_griseus_crigri
ENSMALG00000011017pabpc410096.343ENSCSEG00000000130pabpc410096.343Cynoglossus_semilaevis
ENSMALG00000011017pabpc49995.793ENSCVAG00000019246pabpc49996.236Cyprinodon_variegatus
ENSMALG00000011017pabpc49892.687ENSDARG00000059259pabpc410092.422Danio_rerio
ENSMALG00000011017pabpc49981.359ENSDNOG00000018444-9981.673Dasypus_novemcinctus
ENSMALG00000011017pabpc410081.069ENSDORG00000011581Pabpc49981.115Dipodomys_ordii
ENSMALG00000011017pabpc48553.931ENSETEG00000009172-9952.372Echinops_telfairi
ENSMALG00000011017pabpc410090.625ENSETEG00000018453-8490.625Echinops_telfairi
ENSMALG00000011017pabpc49776.661ENSEBUG00000013782pabpc49976.190Eptatretus_burgeri
ENSMALG00000011017pabpc49976.349ENSEBUG00000000992pabpc410076.032Eptatretus_burgeri
ENSMALG00000011017pabpc410079.285ENSEASG00005014119PABPC49979.154Equus_asinus_asinus
ENSMALG00000011017pabpc410079.285ENSECAG00000009396PABPC49979.154Equus_caballus
ENSMALG00000011017pabpc49778.593ENSEEUG00000002962PABPC49977.795Erinaceus_europaeus
ENSMALG00000011017pabpc49892.540ENSELUG00000003195pabpc49992.247Esox_lucius
ENSMALG00000011017pabpc410082.481ENSFCAG00000015254-9982.780Felis_catus
ENSMALG00000011017pabpc49984.639ENSFALG00000000543PABPC49985.397Ficedula_albicollis
ENSMALG00000011017pabpc48951.368ENSFDAG00000010581-9949.570Fukomys_damarensis
ENSMALG00000011017pabpc410079.049ENSFDAG00000020016-9979.003Fukomys_damarensis
ENSMALG00000011017pabpc49995.860ENSFHEG00000007548pabpc410095.860Fundulus_heteroclitus
ENSMALG00000011017pabpc410090.156ENSGMOG00000019025pabpc49990.808Gadus_morhua
ENSMALG00000011017pabpc49985.714ENSGALG00000003800PABPC49985.737Gallus_gallus
ENSMALG00000011017pabpc49997.368ENSGAFG00000018195pabpc49898.889Gambusia_affinis
ENSMALG00000011017pabpc410093.959ENSGACG00000007179pabpc49994.355Gasterosteus_aculeatus
ENSMALG00000011017pabpc49985.714ENSGAGG00000001888PABPC49985.737Gopherus_agassizii
ENSMALG00000011017pabpc410082.326ENSGGOG00000004002PABPC49982.780Gorilla_gorilla
ENSMALG00000011017pabpc410096.979ENSHBUG00000020206pabpc410096.979Haplochromis_burtoni
ENSMALG00000011017pabpc410082.071ENSHGLG00000011162PABPC49982.622Heterocephalus_glaber_female
ENSMALG00000011017pabpc410082.071ENSHGLG00100001580PABPC49982.622Heterocephalus_glaber_male
ENSMALG00000011017pabpc410094.118ENSHCOG00000012694pabpc49995.806Hippocampus_comes
ENSMALG00000011017pabpc49792.122ENSIPUG00000016620pabpc49991.892Ictalurus_punctatus
ENSMALG00000011017pabpc410084.127ENSSTOG00000010416PABPC49983.897Ictidomys_tridecemlineatus
ENSMALG00000011017pabpc410080.611ENSJJAG00000007781Pabpc49980.216Jaculus_jaculus
ENSMALG00000011017pabpc49994.754ENSKMAG00000013597pabpc49995.330Kryptolebias_marmoratus
ENSMALG00000011017pabpc410095.728ENSLBEG00000013654pabpc410095.728Labrus_bergylta
ENSMALG00000011017pabpc49986.185ENSLACG00000011907PABPC49986.371Latimeria_chalumnae
ENSMALG00000011017pabpc49990.895ENSLOCG00000001877pabpc49991.733Lepisosteus_oculatus
ENSMALG00000011017pabpc410084.444ENSLAFG00000000151PABPC49984.219Loxodonta_africana
ENSMALG00000011017pabpc410082.326ENSMFAG00000041481PABPC49982.780Macaca_fascicularis
ENSMALG00000011017pabpc410079.285ENSMMUG00000007497PABPC49979.154Macaca_mulatta
ENSMALG00000011017pabpc410082.326ENSMNEG00000043054PABPC49982.622Macaca_nemestrina
ENSMALG00000011017pabpc410082.326ENSMLEG00000040716PABPC49982.780Mandrillus_leucophaeus
ENSMALG00000011017pabpc410097.933ENSMAMG00000010025pabpc410097.933Mastacembelus_armatus
ENSMALG00000011017pabpc410096.979ENSMZEG00005006141pabpc410096.979Maylandia_zebra
ENSMALG00000011017pabpc49882.828ENSMGAG00000005408PABPC49982.823Meleagris_gallopavo
ENSMALG00000011017pabpc45780.117ENSMAUG00000004089-9280.117Mesocricetus_auratus
ENSMALG00000011017pabpc47691.398ENSMAUG00000019763-8191.579Mesocricetus_auratus
ENSMALG00000011017pabpc47279.048ENSMAUG00000001295-9778.095Mesocricetus_auratus
ENSMALG00000011017pabpc48883.483ENSMICG00000016633-10083.483Microcebus_murinus
ENSMALG00000011017pabpc49974.555ENSMICG00000036729-9973.599Microcebus_murinus
ENSMALG00000011017pabpc410083.492ENSMOCG00000006763Pabpc49883.387Microtus_ochrogaster
ENSMALG00000011017pabpc410092.846ENSMMOG00000002363pabpc49992.903Mola_mola
ENSMALG00000011017pabpc45970.667ENSMODG00000018051-9670.667Monodelphis_domestica
ENSMALG00000011017pabpc49783.410ENSMODG00000017657-9982.648Monodelphis_domestica
ENSMALG00000011017pabpc49970.000MGP_CAROLIEiJ_G0024864-9972.809Mus_caroli
ENSMALG00000011017pabpc410078.125MGP_CAROLIEiJ_G0026435-10096.454Mus_caroli
ENSMALG00000011017pabpc410083.810ENSMUSG00000011257Pabpc410094.643Mus_musculus
ENSMALG00000011017pabpc49978.916MGP_PahariEiJ_G0028765Pabpc410097.163Mus_pahari
ENSMALG00000011017pabpc49970.588MGP_SPRETEiJ_G0027415Pabpc410097.163Mus_spretus
ENSMALG00000011017pabpc410079.285ENSMPUG00000014414-9979.154Mustela_putorius_furo
ENSMALG00000011017pabpc49546.053ENSMPUG00000006836-10045.559Mustela_putorius_furo
ENSMALG00000011017pabpc410084.286ENSMLUG00000012068PABPC49984.058Myotis_lucifugus
ENSMALG00000011017pabpc410084.444ENSNGAG00000018292Pabpc49984.219Nannospalax_galili
ENSMALG00000011017pabpc46598.193ENSNBRG00000010047-7298.193Neolamprologus_brichardi
ENSMALG00000011017pabpc46098.558ENSNBRG00000009708pabpc49898.558Neolamprologus_brichardi
ENSMALG00000011017pabpc410082.326ENSNLEG00000011928PABPC49982.780Nomascus_leucogenys
ENSMALG00000011017pabpc48593.651ENSOPRG00000011984PABPC48693.651Ochotona_princeps
ENSMALG00000011017pabpc45382.857ENSODEG00000013457-10082.857Octodon_degus
ENSMALG00000011017pabpc49973.597ENSODEG00000017434-9972.363Octodon_degus
ENSMALG00000011017pabpc410082.171ENSODEG00000006592-9982.148Octodon_degus
ENSMALG00000011017pabpc410096.979ENSONIG00000008176pabpc410096.979Oreochromis_niloticus
ENSMALG00000011017pabpc49985.086ENSOANG00000010001PABPC49985.103Ornithorhynchus_anatinus
ENSMALG00000011017pabpc49579.656ENSOCUG00000000562PABPC48879.186Oryctolagus_cuniculus
ENSMALG00000011017pabpc49996.605ENSORLG00000017479pabpc49896.308Oryzias_latipes
ENSMALG00000011017pabpc49996.605ENSORLG00020018644pabpc49896.308Oryzias_latipes_hni
ENSMALG00000011017pabpc49996.605ENSORLG00015015042pabpc49896.308Oryzias_latipes_hsok
ENSMALG00000011017pabpc49995.806ENSOMEG00000014410pabpc49895.806Oryzias_melastigma
ENSMALG00000011017pabpc410080.395ENSOGAG00000004067PABPC49980.586Otolemur_garnettii
ENSMALG00000011017pabpc410079.136ENSOARG00000020060PABPC49979.003Ovis_aries
ENSMALG00000011017pabpc410082.326ENSPPAG00000043625PABPC49982.780Pan_paniscus
ENSMALG00000011017pabpc410082.481ENSPPRG00000024727PABPC49982.780Panthera_pardus
ENSMALG00000011017pabpc410082.481ENSPTIG00000005829PABPC49982.780Panthera_tigris_altaica
ENSMALG00000011017pabpc410082.326ENSPTRG00000000573PABPC49982.780Pan_troglodytes
ENSMALG00000011017pabpc410082.326ENSPANG00000009484PABPC49982.780Papio_anubis
ENSMALG00000011017pabpc410090.625ENSPKIG00000025356pabpc49991.442Paramormyrops_kingsleyae
ENSMALG00000011017pabpc49985.871ENSPSIG00000016892PABPC49985.895Pelodiscus_sinensis
ENSMALG00000011017pabpc410091.256ENSPMGG00000009073pabpc49991.774Periophthalmus_magnuspinnatus
ENSMALG00000011017pabpc410080.031ENSPEMG00000024193-9979.435Peromyscus_maniculatus_bairdii
ENSMALG00000011017pabpc410082.071ENSPEMG00000023569-9982.938Peromyscus_maniculatus_bairdii
ENSMALG00000011017pabpc49574.423ENSPMAG00000007885pabpc410073.834Petromyzon_marinus
ENSMALG00000011017pabpc48874.132ENSPMAG00000002836pabpc410075.000Petromyzon_marinus
ENSMALG00000011017pabpc49293.587ENSPCIG00000020674PABPC49994.175Phascolarctos_cinereus
ENSMALG00000011017pabpc49994.268ENSPFOG00000002682pabpc49995.484Poecilia_formosa
ENSMALG00000011017pabpc49994.427ENSPLAG00000010112pabpc49995.645Poecilia_latipinna
ENSMALG00000011017pabpc49895.146ENSPMEG00000019739pabpc49995.645Poecilia_mexicana
ENSMALG00000011017pabpc49995.382ENSPREG00000001589pabpc410095.382Poecilia_reticulata
ENSMALG00000011017pabpc410079.285ENSPPYG00000001506PABPC49979.154Pongo_abelii
ENSMALG00000011017pabpc410074.516ENSPCAG00000003341PABPC49973.867Procavia_capensis
ENSMALG00000011017pabpc49967.714ENSPCOG00000025882-9581.818Propithecus_coquereli
ENSMALG00000011017pabpc410082.198ENSPCOG00000023725-9982.650Propithecus_coquereli
ENSMALG00000011017pabpc49878.218ENSPVAG00000002187PABPC49977.889Pteropus_vampyrus
ENSMALG00000011017pabpc410097.138ENSPNYG00000006134pabpc410097.138Pundamilia_nyererei
ENSMALG00000011017pabpc49993.207ENSPNAG00000024355pabpc49994.231Pygocentrus_nattereri
ENSMALG00000011017pabpc410078.473ENSRNOG00000028592AABR07035074.19978.483Rattus_norvegicus
ENSMALG00000011017pabpc410080.611ENSRNOG00000015642Pabpc49980.650Rattus_norvegicus
ENSMALG00000011017pabpc410082.326ENSRBIG00000039761PABPC49982.780Rhinopithecus_bieti
ENSMALG00000011017pabpc410082.326ENSRROG00000033355PABPC49982.780Rhinopithecus_roxellana
ENSMALG00000011017pabpc410082.481ENSSBOG00000026193PABPC49982.938Saimiri_boliviensis_boliviensis
ENSMALG00000011017pabpc49786.240ENSSHAG00000018139PABPC49985.420Sarcophilus_harrisii
ENSMALG00000011017pabpc49990.717ENSSFOG00015023514pabpc49991.240Scleropages_formosus
ENSMALG00000011017pabpc410096.502ENSSMAG00000009007pabpc410096.502Scophthalmus_maximus
ENSMALG00000011017pabpc410097.933ENSSDUG00000012683pabpc410097.933Seriola_dumerili
ENSMALG00000011017pabpc410097.933ENSSLDG00000013025pabpc410097.933Seriola_lalandi_dorsalis
ENSMALG00000011017pabpc410073.214ENSSARG00000000310PABPC49972.549Sorex_araneus
ENSMALG00000011017pabpc49986.371ENSSPUG00000003204PABPC49986.400Sphenodon_punctatus
ENSMALG00000011017pabpc410097.615ENSSPAG00000009252pabpc410097.615Stegastes_partitus
ENSMALG00000011017pabpc410082.481ENSSSCG00000003660-9982.780Sus_scrofa
ENSMALG00000011017pabpc48844.920ENSSSCG00000036170-9544.964Sus_scrofa
ENSMALG00000011017pabpc49980.960ENSTGUG00000001266PABPC49981.694Taeniopygia_guttata
ENSMALG00000011017pabpc410094.754ENSTRUG00000005907pabpc49995.161Takifugu_rubripes
ENSMALG00000011017pabpc410088.076ENSTNIG00000016902pabpc49988.226Tetraodon_nigroviridis
ENSMALG00000011017pabpc49968.317ENSTBEG00000009035PABPC49968.174Tupaia_belangeri
ENSMALG00000011017pabpc49961.726ENSTTRG00000014340PABPC49967.337Tursiops_truncatus
ENSMALG00000011017pabpc410082.481ENSUAMG00000000303PABPC49982.780Ursus_americanus
ENSMALG00000011017pabpc410089.116ENSUMAG00000019585PABPC49991.325Ursus_maritimus
ENSMALG00000011017pabpc47769.912ENSVPAG00000010041PABPC47369.912Vicugna_pacos
ENSMALG00000011017pabpc410082.481ENSVVUG00000005215PABPC49982.780Vulpes_vulpes
ENSMALG00000011017pabpc49981.476ENSXETG00000010946pabpc49981.616Xenopus_tropicalis
ENSMALG00000011017pabpc46796.429ENSXETG00000027221-10096.429Xenopus_tropicalis
ENSMALG00000011017pabpc49996.834ENSXCOG00000013190pabpc49695.283Xiphophorus_couchianus
ENSMALG00000011017pabpc49995.382ENSXMAG00000019007pabpc410095.382Xiphophorus_maculatus

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