EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMALG00000011453 (Gene tree)
Gene ID
109968543
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A1
Gene Type
protein_coding
Species
Monopterus_albus
Status
putative
Strand
Plus strand
Length
33324 bases
Position
chrKV884840.1:65795-99118
Accession
109968543
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMALP00000016486tRNA_anti-codonPF01336.251.7e-1211
ENSMALP00000016368tRNA_anti-codonPF01336.251.7e-1211
ENSMALP00000016398tRNA_anti-codonPF01336.251.7e-1211
ENSMALP00000016423tRNA_anti-codonPF01336.251.7e-1211
ENSMALP00000016455tRNA_anti-codonPF01336.251.7e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMALT00000016818-1710-ENSMALP00000016486569 (aa)--
ENSMALT00000016698-3916-ENSMALP00000016368599 (aa)-UPI0009B31A0D
ENSMALT00000016786-3916XM_020614882ENSMALP00000016455599 (aa)XP_020470538UPI0009B31A0D
ENSMALT00000016728-3916-ENSMALP00000016398599 (aa)-UPI0009B31A0D
ENSMALT00000016754-3916-ENSMALP00000016423599 (aa)-UPI0009B31A0D
Gene Model
Click here to download ENSMALG00000011453's gene model file
Pathways
Pathway IDPathway NameSource
malb03030DNA replicationKEGG
malb03420Nucleotide excision repairKEGG
malb03430Mismatch repairKEGG
malb03440Homologous recombinationKEGG
malb03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000011453's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMALG00000011453rpa19268.409ENSMALG00000001208RPA17768.409
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMALG00000011453rpa19468.793ENSAPOG00000019409RPA18768.793Acanthochromis_polyacanthus
ENSMALG00000011453rpa110087.333ENSAPOG00000011658rpa110087.333Acanthochromis_polyacanthus
ENSMALG00000011453rpa19664.746ENSAMEG00000007706RPA19564.576Ailuropoda_melanoleuca
ENSMALG00000011453rpa19562.222ENSACIG00000012881RPA19962.222Amphilophus_citrinellus
ENSMALG00000011453rpa19678.435ENSACIG00000007277rpa19978.435Amphilophus_citrinellus
ENSMALG00000011453rpa19987.919ENSAOCG00000023376rpa19987.919Amphiprion_ocellaris
ENSMALG00000011453rpa19958.567ENSAOCG00000009003RPA19958.879Amphiprion_ocellaris
ENSMALG00000011453rpa19988.087ENSAPEG00000008634rpa19988.087Amphiprion_percula
ENSMALG00000011453rpa19957.230ENSAPEG00000019132RPA19957.686Amphiprion_percula
ENSMALG00000011453rpa19587.346ENSATEG00000022024rpa110087.346Anabas_testudineus
ENSMALG00000011453rpa19959.006ENSATEG00000006443RPA19959.006Anabas_testudineus
ENSMALG00000011453rpa19753.720ENSAPLG00000012442RPA19953.812Anas_platyrhynchos
ENSMALG00000011453rpa19958.209ENSACAG00000014490RPA19858.209Anolis_carolinensis
ENSMALG00000011453rpa19664.189ENSANAG00000023456RPA19864.020Aotus_nancymaae
ENSMALG00000011453rpa19961.321ENSACLG00000005223RPA19961.321Astatotilapia_calliptera
ENSMALG00000011453rpa19487.701ENSACLG00000006640rpa19987.701Astatotilapia_calliptera
ENSMALG00000011453rpa19977.833ENSAMXG00000008418rpa19978.333Astyanax_mexicanus
ENSMALG00000011453rpa19963.175ENSBTAG00000009711RPA19963.011Bos_taurus
ENSMALG00000011453rpa18332.231WBGene00017546rpa-17232.231Caenorhabditis_elegans
ENSMALG00000011453rpa19962.153ENSCJAG00000001848RPA19961.928Callithrix_jacchus
ENSMALG00000011453rpa19963.487ENSCAFG00000019249RPA19963.980Canis_familiaris
ENSMALG00000011453rpa19963.487ENSCAFG00020009847RPA19963.980Canis_lupus_dingo
ENSMALG00000011453rpa19962.848ENSCHIG00000026308RPA19963.666Capra_hircus
ENSMALG00000011453rpa19963.011ENSTSYG00000003482-9962.623Carlito_syrichta
ENSMALG00000011453rpa19964.098ENSCPOG00000000035RPA19963.934Cavia_porcellus
ENSMALG00000011453rpa19952.855ENSCCAG00000010981RPA19952.614Cebus_capucinus
ENSMALG00000011453rpa19963.054ENSCLAG00000005185-9962.890Chinchilla_lanigera
ENSMALG00000011453rpa19959.375ENSCLAG00000015045-9959.375Chinchilla_lanigera
ENSMALG00000011453rpa19953.344ENSCSAG00000013833RPA19953.105Chlorocebus_sabaeus
ENSMALG00000011453rpa19562.842ENSCHOG00000013540-9962.671Choloepus_hoffmanni
ENSMALG00000011453rpa17271.429ENSCHOG00000009454-9971.198Choloepus_hoffmanni
ENSMALG00000011453rpa19963.725ENSCPBG00000020377RPA19964.448Chrysemys_picta_bellii
ENSMALG00000011453rpa19943.760ENSCING00000023482-9843.760Ciona_intestinalis
ENSMALG00000011453rpa19863.514ENSCANG00000030911RPA19963.345Colobus_angolensis_palliatus
ENSMALG00000011453rpa19963.458ENSCGRG00001008197Rpa19962.643Cricetulus_griseus_chok1gshd
ENSMALG00000011453rpa18165.415ENSCGRG00000000582Rpa19964.427Cricetulus_griseus_crigri
ENSMALG00000011453rpa110080.231ENSCSEG00000013066rpa110080.231Cynoglossus_semilaevis
ENSMALG00000011453rpa19954.647ENSCSEG00000012726RPA19956.357Cynoglossus_semilaevis
ENSMALG00000011453rpa110085.314ENSCVAG00000019431rpa110085.479Cyprinodon_variegatus
ENSMALG00000011453rpa19571.429ENSCVAG00000013446-8371.429Cyprinodon_variegatus
ENSMALG00000011453rpa19976.294ENSDARG00000003938rpa19976.294Danio_rerio
ENSMALG00000011453rpa19963.651ENSDNOG00000017218RPA19963.487Dasypus_novemcinctus
ENSMALG00000011453rpa19963.711ENSDORG00000006199Rpa19963.711Dipodomys_ordii
ENSMALG00000011453rpa19942.414FBgn0010173RpA-709943.067Drosophila_melanogaster
ENSMALG00000011453rpa18273.684ENSETEG00000017608RPA18273.684Echinops_telfairi
ENSMALG00000011453rpa19665.424ENSEASG00005009372RPA19964.664Equus_asinus_asinus
ENSMALG00000011453rpa19964.532ENSECAG00000023886RPA19964.532Equus_caballus
ENSMALG00000011453rpa17071.122ENSEEUG00000002186-6870.883Erinaceus_europaeus
ENSMALG00000011453rpa18861.860ENSELUG00000006136RPA19961.860Esox_lucius
ENSMALG00000011453rpa19981.322ENSELUG00000021071rpa19981.322Esox_lucius
ENSMALG00000011453rpa19963.711ENSFCAG00000006306RPA19963.383Felis_catus
ENSMALG00000011453rpa19962.171ENSFALG00000006575RPA19962.007Ficedula_albicollis
ENSMALG00000011453rpa19964.918ENSFDAG00000007720RPA19964.590Fukomys_damarensis
ENSMALG00000011453rpa110083.306ENSFHEG00000003580rpa110083.306Fundulus_heteroclitus
ENSMALG00000011453rpa19977.403ENSGMOG00000010382rpa19977.403Gadus_morhua
ENSMALG00000011453rpa19961.716ENSGALG00000003072RPA19961.551Gallus_gallus
ENSMALG00000011453rpa110085.191ENSGAFG00000012916rpa110085.191Gambusia_affinis
ENSMALG00000011453rpa19469.773ENSGAFG00000020953RPA19958.193Gambusia_affinis
ENSMALG00000011453rpa110083.748ENSGACG00000010856rpa110083.748Gasterosteus_aculeatus
ENSMALG00000011453rpa19963.399ENSGAGG00000013611RPA19963.399Gopherus_agassizii
ENSMALG00000011453rpa19963.987ENSGGOG00000014186RPA19963.819Gorilla_gorilla
ENSMALG00000011453rpa19557.913ENSHBUG00000009348RPA19857.913Haplochromis_burtoni
ENSMALG00000011453rpa19989.667ENSHBUG00000017773rpa19989.667Haplochromis_burtoni
ENSMALG00000011453rpa19964.098ENSHGLG00000008846RPA19964.098Heterocephalus_glaber_female
ENSMALG00000011453rpa19960.263ENSHGLG00100000799-9959.934Heterocephalus_glaber_male
ENSMALG00000011453rpa19964.098ENSHGLG00100017755-9964.098Heterocephalus_glaber_male
ENSMALG00000011453rpa19954.173ENSHGLG00100002005-9954.337Heterocephalus_glaber_male
ENSMALG00000011453rpa110074.675ENSHCOG00000001401rpa110075.041Hippocampus_comes
ENSMALG00000011453rpa19944.983ENSHCOG00000000351RPA19844.352Hippocampus_comes
ENSMALG00000011453rpa19977.114ENSIPUG00000004400rpa19977.114Ictalurus_punctatus
ENSMALG00000011453rpa19163.668ENSSTOG00000022475RPA19563.492Ictidomys_tridecemlineatus
ENSMALG00000011453rpa19664.686ENSJJAG00000000876Rpa19864.516Jaculus_jaculus
ENSMALG00000011453rpa110080.656ENSKMAG00000005605rpa110080.820Kryptolebias_marmoratus
ENSMALG00000011453rpa19960.500ENSKMAG00000000234RPA19960.500Kryptolebias_marmoratus
ENSMALG00000011453rpa19968.636ENSLBEG00000002281RPA18668.636Labrus_bergylta
ENSMALG00000011453rpa19985.667ENSLBEG00000021604rpa19985.667Labrus_bergylta
ENSMALG00000011453rpa18061.963ENSLACG00000007210RPA19961.759Latimeria_chalumnae
ENSMALG00000011453rpa19971.973ENSLOCG00000006397rpa19971.973Lepisosteus_oculatus
ENSMALG00000011453rpa19962.682ENSLAFG00000015354RPA19962.520Loxodonta_africana
ENSMALG00000011453rpa18362.449ENSMFAG00000036138-9861.741Macaca_fascicularis
ENSMALG00000011453rpa19958.170ENSMMUG00000002442-9958.007Macaca_mulatta
ENSMALG00000011453rpa19963.158ENSMMUG00000011604-9962.932Macaca_mulatta
ENSMALG00000011453rpa18765.789ENSMNEG00000029837-9665.570Macaca_nemestrina
ENSMALG00000011453rpa19962.092ENSMNEG00000031632-9961.866Macaca_nemestrina
ENSMALG00000011453rpa19661.008ENSMLEG00000038768-9861.008Mandrillus_leucophaeus
ENSMALG00000011453rpa19270.794ENSMAMG00000020097RPA18469.545Mastacembelus_armatus
ENSMALG00000011453rpa110090.500ENSMAMG00000017993rpa110090.500Mastacembelus_armatus
ENSMALG00000011453rpa19961.321ENSMZEG00005024731RPA19961.321Maylandia_zebra
ENSMALG00000011453rpa19989.333ENSMZEG00005007551rpa19989.333Maylandia_zebra
ENSMALG00000011453rpa19860.963ENSMGAG00000005315RPA19860.797Meleagris_gallopavo
ENSMALG00000011453rpa19664.007ENSMAUG00000010474Rpa19864.746Mesocricetus_auratus
ENSMALG00000011453rpa19964.484ENSMICG00000012867RPA19964.321Microcebus_murinus
ENSMALG00000011453rpa19963.322ENSMOCG00000013019Rpa19963.158Microtus_ochrogaster
ENSMALG00000011453rpa110081.667ENSMMOG00000014292rpa110083.621Mola_mola
ENSMALG00000011453rpa19863.203ENSMMOG00000010868RPA19863.203Mola_mola
ENSMALG00000011453rpa19962.908ENSMODG00000010549RPA19962.745Monodelphis_domestica
ENSMALG00000011453rpa19962.582MGP_CAROLIEiJ_G0016734Rpa19962.806Mus_caroli
ENSMALG00000011453rpa19961.588ENSMUSG00000000751Rpa19961.812Mus_musculus
ENSMALG00000011453rpa19962.866MGP_PahariEiJ_G0017871Rpa19962.927Mus_pahari
ENSMALG00000011453rpa19961.489MGP_SPRETEiJ_G0017577Rpa19961.712Mus_spretus
ENSMALG00000011453rpa19963.980ENSMPUG00000013119RPA19963.816Mustela_putorius_furo
ENSMALG00000011453rpa19962.825ENSMLUG00000006113RPA19962.662Myotis_lucifugus
ENSMALG00000011453rpa19564.103ENSNGAG00000004522Rpa19363.932Nannospalax_galili
ENSMALG00000011453rpa19587.478ENSNBRG00000020595rpa19987.478Neolamprologus_brichardi
ENSMALG00000011453rpa19858.765ENSNBRG00000009672RPA19658.932Neolamprologus_brichardi
ENSMALG00000011453rpa19963.666ENSNLEG00000017149RPA19963.934Nomascus_leucogenys
ENSMALG00000011453rpa19655.085ENSMEUG00000006714RPA19754.915Notamacropus_eugenii
ENSMALG00000011453rpa19562.521ENSODEG00000009038RPA19662.353Octodon_degus
ENSMALG00000011453rpa19987.745ENSONIG00000013135rpa19987.745Oreochromis_niloticus
ENSMALG00000011453rpa19864.238ENSOANG00000010880RPA19964.073Ornithorhynchus_anatinus
ENSMALG00000011453rpa19961.682ENSOCUG00000001504RPA19961.526Oryctolagus_cuniculus
ENSMALG00000011453rpa19986.577ENSORLG00000004856rpa19986.577Oryzias_latipes
ENSMALG00000011453rpa19957.099ENSORLG00000003368RPA19957.099Oryzias_latipes
ENSMALG00000011453rpa19986.913ENSORLG00020008980rpa19986.913Oryzias_latipes_hni
ENSMALG00000011453rpa19367.150ENSORLG00020015284RPA19954.848Oryzias_latipes_hni
ENSMALG00000011453rpa19957.704ENSORLG00015020383RPA19957.704Oryzias_latipes_hsok
ENSMALG00000011453rpa19986.913ENSORLG00015013982rpa19986.913Oryzias_latipes_hsok
ENSMALG00000011453rpa17366.827ENSORLG00015005867-9566.827Oryzias_latipes_hsok
ENSMALG00000011453rpa19558.290ENSOMEG00000011040RPA19959.331Oryzias_melastigma
ENSMALG00000011453rpa19982.215ENSOMEG00000004704rpa19982.215Oryzias_melastigma
ENSMALG00000011453rpa19963.218ENSOGAG00000005581-9963.054Otolemur_garnettii
ENSMALG00000011453rpa19355.319ENSOGAG00000029379-9675.862Otolemur_garnettii
ENSMALG00000011453rpa19962.848ENSOARG00000014479RPA19963.666Ovis_aries
ENSMALG00000011453rpa19964.157ENSPPAG00000039680RPA19964.426Pan_paniscus
ENSMALG00000011453rpa19963.383ENSPPRG00000011807RPA19963.218Panthera_pardus
ENSMALG00000011453rpa19963.383ENSPTIG00000007898RPA19963.218Panthera_tigris_altaica
ENSMALG00000011453rpa19964.157ENSPTRG00000008539RPA19964.426Pan_troglodytes
ENSMALG00000011453rpa19963.132ENSPANG00000024592RPA19962.908Papio_anubis
ENSMALG00000011453rpa19975.456ENSPKIG00000008053rpa19875.788Paramormyrops_kingsleyae
ENSMALG00000011453rpa19663.682ENSPSIG00000015617RPA19863.682Pelodiscus_sinensis
ENSMALG00000011453rpa19981.345ENSPMGG00000011589rpa19981.345Periophthalmus_magnuspinnatus
ENSMALG00000011453rpa19859.750ENSPMGG00000000543RPA19962.094Periophthalmus_magnuspinnatus
ENSMALG00000011453rpa19964.860ENSPEMG00000021061Rpa19964.696Peromyscus_maniculatus_bairdii
ENSMALG00000011453rpa19962.745ENSPCIG00000019049RPA19962.582Phascolarctos_cinereus
ENSMALG00000011453rpa110085.524ENSPFOG00000003987rpa110085.524Poecilia_formosa
ENSMALG00000011453rpa19560.000ENSPLAG00000008844-9659.187Poecilia_latipinna
ENSMALG00000011453rpa110085.691ENSPLAG00000004984rpa110085.691Poecilia_latipinna
ENSMALG00000011453rpa110085.691ENSPMEG00000020602rpa110085.691Poecilia_mexicana
ENSMALG00000011453rpa19559.167ENSPMEG00000003627-9658.738Poecilia_mexicana
ENSMALG00000011453rpa19370.455ENSPREG00000010119RPA18970.560Poecilia_reticulata
ENSMALG00000011453rpa19579.228ENSPREG00000010174rpa19578.571Poecilia_reticulata
ENSMALG00000011453rpa19964.274ENSPCOG00000001799RPA19964.111Propithecus_coquereli
ENSMALG00000011453rpa19962.684ENSPVAG00000002149RPA19962.520Pteropus_vampyrus
ENSMALG00000011453rpa19989.667ENSPNYG00000016316rpa19989.667Pundamilia_nyererei
ENSMALG00000011453rpa19961.164ENSPNYG00000024165RPA19961.164Pundamilia_nyererei
ENSMALG00000011453rpa19968.908ENSPNAG00000008599rpa19670.506Pygocentrus_nattereri
ENSMALG00000011453rpa19670.388ENSRNOG00000003123Rpa19964.145Rattus_norvegicus
ENSMALG00000011453rpa19962.866ENSRBIG00000036587RPA19962.704Rhinopithecus_bieti
ENSMALG00000011453rpa19957.818ENSRROG00000043278RPA19957.843Rhinopithecus_roxellana
ENSMALG00000011453rpa19531.872YAR007CRFA19431.491Saccharomyces_cerevisiae
ENSMALG00000011453rpa19164.884ENSSBOG00000030233RPA19764.643Saimiri_boliviensis_boliviensis
ENSMALG00000011453rpa19962.848ENSSHAG00000007969RPA19863.175Sarcophilus_harrisii
ENSMALG00000011453rpa19981.364ENSSFOG00015005362rpa19281.198Scleropages_formosus
ENSMALG00000011453rpa19957.099ENSSMAG00000019746RPA19957.099Scophthalmus_maximus
ENSMALG00000011453rpa19271.562ENSSDUG00000016358RPA18271.494Seriola_dumerili
ENSMALG00000011453rpa110090.500ENSSDUG00000011949rpa110090.500Seriola_dumerili
ENSMALG00000011453rpa19270.833ENSSLDG00000020784RPA18371.264Seriola_lalandi_dorsalis
ENSMALG00000011453rpa110090.500ENSSLDG00000011806rpa110090.500Seriola_lalandi_dorsalis
ENSMALG00000011453rpa18572.727ENSSARG00000007506RPA18772.727Sorex_araneus
ENSMALG00000011453rpa19662.881ENSSPUG00000007223RPA19862.881Sphenodon_punctatus
ENSMALG00000011453rpa19862.086ENSSPAG00000011165RPA19862.086Stegastes_partitus
ENSMALG00000011453rpa110088.167ENSSPAG00000009903rpa110088.167Stegastes_partitus
ENSMALG00000011453rpa19963.394ENSSSCG00000017822RPA19963.105Sus_scrofa
ENSMALG00000011453rpa19961.803ENSTGUG00000005775RPA19961.803Taeniopygia_guttata
ENSMALG00000011453rpa19170.188ENSTRUG00000000405RPA17870.046Takifugu_rubripes
ENSMALG00000011453rpa110084.833ENSTRUG00000003616rpa110084.833Takifugu_rubripes
ENSMALG00000011453rpa110084.967ENSTNIG00000016199rpa19984.918Tetraodon_nigroviridis
ENSMALG00000011453rpa17371.136ENSTBEG00000002709RPA17470.909Tupaia_belangeri
ENSMALG00000011453rpa19963.011ENSTTRG00000001169RPA19963.029Tursiops_truncatus
ENSMALG00000011453rpa18973.077ENSUAMG00000015676RPA19573.077Ursus_americanus
ENSMALG00000011453rpa19963.652ENSUMAG00000009328RPA19963.547Ursus_maritimus
ENSMALG00000011453rpa19961.614ENSVPAG00000009443RPA19961.450Vicugna_pacos
ENSMALG00000011453rpa19963.383ENSVVUG00000021715RPA19963.875Vulpes_vulpes
ENSMALG00000011453rpa19966.502ENSXETG00000013538rpa19967.107Xenopus_tropicalis
ENSMALG00000011453rpa19561.754ENSXCOG00000009899-9961.754Xiphophorus_couchianus
ENSMALG00000011453rpa19586.372ENSXCOG00000010068rpa19585.064Xiphophorus_couchianus
ENSMALG00000011453rpa110084.859ENSXMAG00000004102rpa110085.689Xiphophorus_maculatus
ENSMALG00000011453rpa19470.000ENSXMAG00000010333RPA18270.000Xiphophorus_maculatus

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