EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000012050 (Gene tree)
Gene ID: 109969033
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 12187 bases
Position: chrKV884856.1:818513-830699
Accession: 109969033
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000017308	Suf	PF05843.14	4.2e-84	1	1
ENSMALP00000017278	Suf	PF05843.14	1.1e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000017649	-	2145	-	ENSMALP00000017308	714 (aa)	-	-
ENSMALT00000017618	-	2739	XM_020615671	ENSMALP00000017278	716 (aa)	XP_020471327	UPI0009B4E8D7

Gene Model

Click here to download ENSMALG00000012050's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000012050's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000012050	cstf3	100	90.808	ENSG00000176102	CSTF3	100	90.808	Homo_sapiens
ENSMALG00000012050	cstf3	100	98.603	ENSAPOG00000014054	cstf3	100	98.603	Acanthochromis_polyacanthus
ENSMALG00000012050	cstf3	99	91.243	ENSAMEG00000007187	CSTF3	98	91.243	Ailuropoda_melanoleuca
ENSMALG00000012050	cstf3	87	93.098	ENSACIG00000005539	cstf3	100	93.098	Amphilophus_citrinellus
ENSMALG00000012050	cstf3	100	98.603	ENSAOCG00000010930	cstf3	100	98.603	Amphiprion_ocellaris
ENSMALG00000012050	cstf3	100	98.603	ENSAPEG00000007903	cstf3	100	98.603	Amphiprion_percula
ENSMALG00000012050	cstf3	100	98.324	ENSATEG00000000190	cstf3	100	98.324	Anabas_testudineus
ENSMALG00000012050	cstf3	99	91.525	ENSAPLG00000007217	CSTF3	100	91.525	Anas_platyrhynchos
ENSMALG00000012050	cstf3	100	91.643	ENSACAG00000002823	CSTF3	100	91.643	Anolis_carolinensis
ENSMALG00000012050	cstf3	100	90.808	ENSANAG00000020699	CSTF3	100	90.808	Aotus_nancymaae
ENSMALG00000012050	cstf3	100	97.905	ENSACLG00000007820	cstf3	100	97.905	Astatotilapia_calliptera
ENSMALG00000012050	cstf3	100	92.618	ENSAMXG00000014198	cstf3	100	93.175	Astyanax_mexicanus
ENSMALG00000012050	cstf3	100	90.808	ENSBTAG00000008617	CSTF3	100	91.098	Bos_taurus
ENSMALG00000012050	cstf3	97	47.574	WBGene00006307	suf-1	99	47.574	Caenorhabditis_elegans
ENSMALG00000012050	cstf3	100	90.808	ENSCJAG00000005533	CSTF3	100	90.808	Callithrix_jacchus
ENSMALG00000012050	cstf3	100	90.808	ENSCAFG00000007264	CSTF3	100	90.808	Canis_familiaris
ENSMALG00000012050	cstf3	99	91.384	ENSCAFG00020002715	CSTF3	98	91.384	Canis_lupus_dingo
ENSMALG00000012050	cstf3	98	90.157	ENSCHIG00000016418	CSTF3	100	90.720	Capra_hircus
ENSMALG00000012050	cstf3	99	91.667	ENSTSYG00000000451	CSTF3	99	96.659	Carlito_syrichta
ENSMALG00000012050	cstf3	83	89.048	ENSCAPG00000010958	CSTF3	98	89.048	Cavia_aperea
ENSMALG00000012050	cstf3	100	90.947	ENSCPOG00000005545	CSTF3	100	90.947	Cavia_porcellus
ENSMALG00000012050	cstf3	100	90.808	ENSCCAG00000024790	CSTF3	96	96.659	Cebus_capucinus
ENSMALG00000012050	cstf3	100	90.808	ENSCATG00000007080	CSTF3	100	90.808	Cercocebus_atys
ENSMALG00000012050	cstf3	100	90.808	ENSCLAG00000016179	CSTF3	100	90.808	Chinchilla_lanigera
ENSMALG00000012050	cstf3	78	97.368	ENSCHOG00000002497	CSTF3	79	97.368	Choloepus_hoffmanni
ENSMALG00000012050	cstf3	100	90.947	ENSCPBG00000006753	CSTF3	100	90.947	Chrysemys_picta_bellii
ENSMALG00000012050	cstf3	99	61.720	ENSCING00000006401	-	99	61.720	Ciona_intestinalis
ENSMALG00000012050	cstf3	98	61.119	ENSCSAVG00000004851	-	100	61.119	Ciona_savignyi
ENSMALG00000012050	cstf3	100	90.808	ENSCANG00000035468	CSTF3	100	90.808	Colobus_angolensis_palliatus
ENSMALG00000012050	cstf3	100	90.669	ENSCGRG00001014773	Cstf3	100	90.669	Cricetulus_griseus_chok1gshd
ENSMALG00000012050	cstf3	100	90.669	ENSCGRG00000004142	Cstf3	100	90.669	Cricetulus_griseus_crigri
ENSMALG00000012050	cstf3	100	97.207	ENSCSEG00000014283	cstf3	100	97.207	Cynoglossus_semilaevis
ENSMALG00000012050	cstf3	100	96.369	ENSCVAG00000019739	cstf3	100	96.369	Cyprinodon_variegatus
ENSMALG00000012050	cstf3	100	94.142	ENSDARG00000018904	cstf3	100	94.142	Danio_rerio
ENSMALG00000012050	cstf3	99	91.049	ENSDNOG00000007366	CSTF3	99	91.049	Dasypus_novemcinctus
ENSMALG00000012050	cstf3	99	84.203	ENSDORG00000005898	Cstf3	99	84.203	Dipodomys_ordii
ENSMALG00000012050	cstf3	99	55.660	FBgn0003559	su(f)	99	55.660	Drosophila_melanogaster
ENSMALG00000012050	cstf3	89	85.514	ENSETEG00000017097	CSTF3	90	85.514	Echinops_telfairi
ENSMALG00000012050	cstf3	84	74.709	ENSEBUG00000015459	cstf3	96	74.709	Eptatretus_burgeri
ENSMALG00000012050	cstf3	99	90.395	ENSEASG00005019884	CSTF3	96	96.659	Equus_asinus_asinus
ENSMALG00000012050	cstf3	99	90.395	ENSECAG00000023338	CSTF3	96	96.659	Equus_caballus
ENSMALG00000012050	cstf3	100	86.072	ENSEEUG00000015167	CSTF3	100	86.072	Erinaceus_europaeus
ENSMALG00000012050	cstf3	100	94.840	ENSELUG00000023393	cstf3	100	94.840	Esox_lucius
ENSMALG00000012050	cstf3	100	90.947	ENSFCAG00000030711	CSTF3	100	90.947	Felis_catus
ENSMALG00000012050	cstf3	92	93.363	ENSFALG00000010764	CSTF3	100	90.323	Ficedula_albicollis
ENSMALG00000012050	cstf3	100	90.947	ENSFDAG00000012082	CSTF3	100	90.947	Fukomys_damarensis
ENSMALG00000012050	cstf3	100	97.067	ENSFHEG00000020623	cstf3	100	97.067	Fundulus_heteroclitus
ENSMALG00000012050	cstf3	100	94.429	ENSGMOG00000012275	cstf3	100	94.429	Gadus_morhua
ENSMALG00000012050	cstf3	100	90.669	ENSGALG00000011685	CSTF3	100	90.669	Gallus_gallus
ENSMALG00000012050	cstf3	100	96.788	ENSGAFG00000002181	cstf3	100	96.788	Gambusia_affinis
ENSMALG00000012050	cstf3	100	97.486	ENSGACG00000015997	cstf3	100	97.486	Gasterosteus_aculeatus
ENSMALG00000012050	cstf3	100	90.947	ENSGAGG00000006200	CSTF3	100	90.947	Gopherus_agassizii
ENSMALG00000012050	cstf3	99	85.836	ENSGGOG00000026591	CSTF3	96	92.170	Gorilla_gorilla
ENSMALG00000012050	cstf3	100	98.045	ENSHBUG00000016656	cstf3	100	98.045	Haplochromis_burtoni
ENSMALG00000012050	cstf3	100	90.808	ENSHGLG00000017834	CSTF3	100	90.808	Heterocephalus_glaber_female
ENSMALG00000012050	cstf3	100	90.808	ENSHGLG00100018042	CSTF3	100	90.808	Heterocephalus_glaber_male
ENSMALG00000012050	cstf3	100	93.978	ENSHCOG00000015218	cstf3	100	93.978	Hippocampus_comes
ENSMALG00000012050	cstf3	100	93.166	ENSIPUG00000013170	CSTF3	100	93.166	Ictalurus_punctatus
ENSMALG00000012050	cstf3	100	90.808	ENSSTOG00000013306	CSTF3	100	90.808	Ictidomys_tridecemlineatus
ENSMALG00000012050	cstf3	99	81.356	ENSJJAG00000018430	Cstf3	98	81.356	Jaculus_jaculus
ENSMALG00000012050	cstf3	100	95.112	ENSKMAG00000010916	cstf3	100	95.112	Kryptolebias_marmoratus
ENSMALG00000012050	cstf3	100	97.346	ENSLBEG00000002306	cstf3	100	97.346	Labrus_bergylta
ENSMALG00000012050	cstf3	100	90.237	ENSLACG00000017296	CSTF3	100	90.237	Latimeria_chalumnae
ENSMALG00000012050	cstf3	100	93.872	ENSLOCG00000004415	cstf3	100	93.872	Lepisosteus_oculatus
ENSMALG00000012050	cstf3	100	90.808	ENSLAFG00000008712	CSTF3	100	90.808	Loxodonta_africana
ENSMALG00000012050	cstf3	100	90.808	ENSMFAG00000029516	CSTF3	100	90.808	Macaca_fascicularis
ENSMALG00000012050	cstf3	100	90.808	ENSMMUG00000002542	CSTF3	100	90.808	Macaca_mulatta
ENSMALG00000012050	cstf3	100	90.808	ENSMNEG00000021807	CSTF3	100	90.808	Macaca_nemestrina
ENSMALG00000012050	cstf3	100	90.808	ENSMLEG00000039594	CSTF3	97	94.878	Mandrillus_leucophaeus
ENSMALG00000012050	cstf3	100	98.324	ENSMAMG00000020423	cstf3	100	98.324	Mastacembelus_armatus
ENSMALG00000012050	cstf3	100	97.905	ENSMZEG00005012082	cstf3	100	97.905	Maylandia_zebra
ENSMALG00000012050	cstf3	100	90.529	ENSMGAG00000001383	CSTF3	100	90.529	Meleagris_gallopavo
ENSMALG00000012050	cstf3	100	90.529	ENSMAUG00000002487	Cstf3	100	90.529	Mesocricetus_auratus
ENSMALG00000012050	cstf3	100	90.669	ENSMICG00000004784	CSTF3	100	90.669	Microcebus_murinus
ENSMALG00000012050	cstf3	100	90.669	ENSMOCG00000017583	Cstf3	100	90.669	Microtus_ochrogaster
ENSMALG00000012050	cstf3	99	98.305	ENSMMOG00000016026	cstf3	95	98.305	Mola_mola
ENSMALG00000012050	cstf3	100	91.226	ENSMODG00000009745	-	100	91.226	Monodelphis_domestica
ENSMALG00000012050	cstf3	100	79.944	ENSMODG00000025205	-	100	79.944	Monodelphis_domestica
ENSMALG00000012050	cstf3	100	90.669	MGP_CAROLIEiJ_G0024026	Cstf3	100	90.669	Mus_caroli
ENSMALG00000012050	cstf3	100	90.669	ENSMUSG00000027176	Cstf3	100	90.669	Mus_musculus
ENSMALG00000012050	cstf3	100	90.669	MGP_PahariEiJ_G0025464	Cstf3	100	90.669	Mus_pahari
ENSMALG00000012050	cstf3	100	90.669	MGP_SPRETEiJ_G0024939	Cstf3	100	90.669	Mus_spretus
ENSMALG00000012050	cstf3	100	90.669	ENSMPUG00000011457	CSTF3	100	90.669	Mustela_putorius_furo
ENSMALG00000012050	cstf3	100	88.162	ENSMLUG00000026022	-	100	88.162	Myotis_lucifugus
ENSMALG00000012050	cstf3	99	91.384	ENSMLUG00000003073	-	99	91.384	Myotis_lucifugus
ENSMALG00000012050	cstf3	100	90.669	ENSNGAG00000010677	Cstf3	100	90.669	Nannospalax_galili
ENSMALG00000012050	cstf3	87	98.074	ENSNBRG00000007345	cstf3	100	98.074	Neolamprologus_brichardi
ENSMALG00000012050	cstf3	100	90.808	ENSNLEG00000017901	CSTF3	97	94.631	Nomascus_leucogenys
ENSMALG00000012050	cstf3	73	90.057	ENSMEUG00000005640	-	100	90.057	Notamacropus_eugenii
ENSMALG00000012050	cstf3	67	89.474	ENSOPRG00000000199	-	67	89.474	Ochotona_princeps
ENSMALG00000012050	cstf3	100	90.808	ENSODEG00000016737	-	100	90.808	Octodon_degus
ENSMALG00000012050	cstf3	89	78.931	ENSODEG00000006311	-	97	78.931	Octodon_degus
ENSMALG00000012050	cstf3	100	97.905	ENSONIG00000005563	cstf3	100	97.905	Oreochromis_niloticus
ENSMALG00000012050	cstf3	90	90.154	ENSOANG00000015140	CSTF3	100	90.154	Ornithorhynchus_anatinus
ENSMALG00000012050	cstf3	100	90.529	ENSOCUG00000015417	CSTF3	100	90.529	Oryctolagus_cuniculus
ENSMALG00000012050	cstf3	100	95.670	ENSORLG00000009762	cstf3	100	95.670	Oryzias_latipes
ENSMALG00000012050	cstf3	100	95.670	ENSORLG00020005540	cstf3	100	95.670	Oryzias_latipes_hni
ENSMALG00000012050	cstf3	100	95.531	ENSORLG00015003551	cstf3	100	95.531	Oryzias_latipes_hsok
ENSMALG00000012050	cstf3	100	96.089	ENSOMEG00000003848	cstf3	100	96.089	Oryzias_melastigma
ENSMALG00000012050	cstf3	100	90.430	ENSOGAG00000010229	CSTF3	100	90.430	Otolemur_garnettii
ENSMALG00000012050	cstf3	90	90.824	ENSOARG00000017271	CSTF3	99	90.824	Ovis_aries
ENSMALG00000012050	cstf3	99	88.244	ENSPPAG00000027358	CSTF3	99	88.244	Pan_paniscus
ENSMALG00000012050	cstf3	100	90.947	ENSPPRG00000016852	CSTF3	100	90.947	Panthera_pardus
ENSMALG00000012050	cstf3	100	90.947	ENSPTIG00000008716	CSTF3	100	90.947	Panthera_tigris_altaica
ENSMALG00000012050	cstf3	100	90.808	ENSPTRG00000003485	CSTF3	100	90.808	Pan_troglodytes
ENSMALG00000012050	cstf3	100	90.808	ENSPANG00000013722	CSTF3	97	94.878	Papio_anubis
ENSMALG00000012050	cstf3	100	93.724	ENSPKIG00000023648	cstf3	100	93.724	Paramormyrops_kingsleyae
ENSMALG00000012050	cstf3	100	90.947	ENSPSIG00000009173	CSTF3	100	90.947	Pelodiscus_sinensis
ENSMALG00000012050	cstf3	77	97.810	ENSPMGG00000000164	cstf3	99	97.810	Periophthalmus_magnuspinnatus
ENSMALG00000012050	cstf3	100	90.669	ENSPEMG00000011481	Cstf3	100	90.669	Peromyscus_maniculatus_bairdii
ENSMALG00000012050	cstf3	99	79.014	ENSPMAG00000007282	cstf3	100	78.750	Petromyzon_marinus
ENSMALG00000012050	cstf3	99	76.718	ENSPCIG00000030419	-	89	76.999	Phascolarctos_cinereus
ENSMALG00000012050	cstf3	100	88.595	ENSPCIG00000026406	-	100	91.200	Phascolarctos_cinereus
ENSMALG00000012050	cstf3	100	97.067	ENSPFOG00000017239	cstf3	100	97.067	Poecilia_formosa
ENSMALG00000012050	cstf3	100	97.207	ENSPLAG00000009456	cstf3	100	97.207	Poecilia_latipinna
ENSMALG00000012050	cstf3	100	97.067	ENSPMEG00000010320	cstf3	100	97.067	Poecilia_mexicana
ENSMALG00000012050	cstf3	100	96.927	ENSPREG00000013549	cstf3	100	96.927	Poecilia_reticulata
ENSMALG00000012050	cstf3	100	90.808	ENSPPYG00000003375	CSTF3	100	90.808	Pongo_abelii
ENSMALG00000012050	cstf3	71	95.819	ENSPCAG00000008025	-	71	95.819	Procavia_capensis
ENSMALG00000012050	cstf3	100	85.894	ENSPCOG00000014417	CSTF3	100	85.894	Propithecus_coquereli
ENSMALG00000012050	cstf3	100	85.794	ENSPVAG00000002350	CSTF3	100	85.794	Pteropus_vampyrus
ENSMALG00000012050	cstf3	100	98.045	ENSPNYG00000018259	cstf3	100	98.045	Pundamilia_nyererei
ENSMALG00000012050	cstf3	100	94.700	ENSPNAG00000020182	cstf3	100	94.700	Pygocentrus_nattereri
ENSMALG00000012050	cstf3	87	90.240	ENSRNOG00000012089	Cstf3	100	90.240	Rattus_norvegicus
ENSMALG00000012050	cstf3	99	90.254	ENSRBIG00000044258	CSTF3	100	90.720	Rhinopithecus_bieti
ENSMALG00000012050	cstf3	100	90.808	ENSRROG00000043450	CSTF3	100	90.808	Rhinopithecus_roxellana
ENSMALG00000012050	cstf3	100	90.808	ENSSBOG00000024764	CSTF3	98	96.659	Saimiri_boliviensis_boliviensis
ENSMALG00000012050	cstf3	99	91.667	ENSSHAG00000018128	-	99	91.667	Sarcophilus_harrisii
ENSMALG00000012050	cstf3	100	80.919	ENSSHAG00000003135	-	99	80.919	Sarcophilus_harrisii
ENSMALG00000012050	cstf3	100	93.584	ENSSFOG00015022133	cstf3	100	93.584	Scleropages_formosus
ENSMALG00000012050	cstf3	100	98.045	ENSSMAG00000002197	cstf3	100	98.045	Scophthalmus_maximus
ENSMALG00000012050	cstf3	100	99.022	ENSSDUG00000020426	cstf3	100	99.022	Seriola_dumerili
ENSMALG00000012050	cstf3	100	98.743	ENSSLDG00000025649	cstf3	100	98.743	Seriola_lalandi_dorsalis
ENSMALG00000012050	cstf3	100	90.529	ENSSARG00000000391	CSTF3	100	90.529	Sorex_araneus
ENSMALG00000012050	cstf3	96	91.172	ENSSPUG00000010546	CSTF3	100	91.172	Sphenodon_punctatus
ENSMALG00000012050	cstf3	100	98.464	ENSSPAG00000004958	cstf3	100	98.464	Stegastes_partitus
ENSMALG00000012050	cstf3	99	90.603	ENSSSCG00000040954	CSTF3	99	90.603	Sus_scrofa
ENSMALG00000012050	cstf3	99	91.243	ENSTGUG00000005010	CSTF3	100	91.243	Taeniopygia_guttata
ENSMALG00000012050	cstf3	100	95.950	ENSTRUG00000004959	cstf3	100	95.950	Takifugu_rubripes
ENSMALG00000012050	cstf3	99	96.751	ENSTNIG00000013811	cstf3	99	96.751	Tetraodon_nigroviridis
ENSMALG00000012050	cstf3	89	88.162	ENSTBEG00000001544	CSTF3	90	88.162	Tupaia_belangeri
ENSMALG00000012050	cstf3	100	88.022	ENSTTRG00000016366	CSTF3	100	88.022	Tursiops_truncatus
ENSMALG00000012050	cstf3	99	91.102	ENSUMAG00000018971	CSTF3	100	90.400	Ursus_maritimus
ENSMALG00000012050	cstf3	100	90.669	ENSVPAG00000007800	CSTF3	100	90.669	Vicugna_pacos
ENSMALG00000012050	cstf3	99	91.384	ENSVVUG00000014938	CSTF3	100	90.720	Vulpes_vulpes
ENSMALG00000012050	cstf3	66	42.324	ENSXETG00000017946	-	99	42.324	Xenopus_tropicalis
ENSMALG00000012050	cstf3	88	75.312	ENSXETG00000021399	cstf3	100	76.375	Xenopus_tropicalis
ENSMALG00000012050	cstf3	87	96.469	ENSXCOG00000011741	cstf3	100	96.469	Xiphophorus_couchianus
ENSMALG00000012050	cstf3	100	96.927	ENSXMAG00000009545	cstf3	100	96.927	Xiphophorus_maculatus