EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000012071 (Gene tree)
Gene ID: 109959803
Gene Symbol: snd1
Alias: SN4TDR|TDRD11|p100L|p100S|wu:fc27g10
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 203993 bases
Position: chrKV884729.1:1164077-1368069
Accession: 109959803
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000017487	TUDOR	PF00567.24	4.1e-26	1	1
ENSMALP00000017457	TUDOR	PF00567.24	4.4e-26	1	1
ENSMALP00000017522	TUDOR	PF00567.24	4.8e-26	1	1
ENSMALP00000017457	SNase	PF00565.17	4.6e-67	1	4
ENSMALP00000017457	SNase	PF00565.17	4.6e-67	2	4
ENSMALP00000017457	SNase	PF00565.17	4.6e-67	3	4
ENSMALP00000017457	SNase	PF00565.17	4.6e-67	4	4
ENSMALP00000017487	SNase	PF00565.17	8.9e-63	1	4
ENSMALP00000017487	SNase	PF00565.17	8.9e-63	2	4
ENSMALP00000017487	SNase	PF00565.17	8.9e-63	3	4
ENSMALP00000017487	SNase	PF00565.17	8.9e-63	4	4
ENSMALP00000017522	SNase	PF00565.17	2.4e-61	1	4
ENSMALP00000017522	SNase	PF00565.17	2.4e-61	2	4
ENSMALP00000017522	SNase	PF00565.17	2.4e-61	3	4
ENSMALP00000017522	SNase	PF00565.17	2.4e-61	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000017798	-	4336	XM_020599455	ENSMALP00000017457	911 (aa)	XP_020455111	A0A2K9QLA8
ENSMALT00000017863	-	2700	-	ENSMALP00000017522	899 (aa)	-	-
ENSMALT00000017828	-	4234	-	ENSMALP00000017487	877 (aa)	-	-

Gene Model

Click here to download ENSMALG00000012071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000012071's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000012071	snd1	98	83.929	ENSG00000197157	SND1	100	83.114	Homo_sapiens
ENSMALG00000012071	snd1	100	95.719	ENSAPOG00000017599	snd1	100	95.719	Acanthochromis_polyacanthus
ENSMALG00000012071	snd1	100	83.151	ENSAMEG00000004664	SND1	94	83.151	Ailuropoda_melanoleuca
ENSMALG00000012071	snd1	100	91.987	ENSACIG00000003551	snd1	100	91.987	Amphilophus_citrinellus
ENSMALG00000012071	snd1	100	95.829	ENSAOCG00000014166	snd1	100	95.829	Amphiprion_ocellaris
ENSMALG00000012071	snd1	100	95.719	ENSAPEG00000007067	snd1	100	95.719	Amphiprion_percula
ENSMALG00000012071	snd1	98	95.108	ENSATEG00000018475	snd1	89	94.743	Anabas_testudineus
ENSMALG00000012071	snd1	98	84.040	ENSANAG00000034463	SND1	100	83.224	Aotus_nancymaae
ENSMALG00000012071	snd1	100	94.292	ENSACLG00000022897	snd1	100	94.292	Astatotilapia_calliptera
ENSMALG00000012071	snd1	99	90.549	ENSAMXG00000016318	snd1	99	90.549	Astyanax_mexicanus
ENSMALG00000012071	snd1	98	84.263	ENSBTAG00000010692	SND1	100	83.443	Bos_taurus
ENSMALG00000012071	snd1	99	47.243	WBGene00006626	tsn-1	99	47.568	Caenorhabditis_elegans
ENSMALG00000012071	snd1	98	83.817	ENSCJAG00000017668	SND1	100	83.004	Callithrix_jacchus
ENSMALG00000012071	snd1	100	83.443	ENSCAFG00000001700	SND1	100	83.443	Canis_familiaris
ENSMALG00000012071	snd1	100	83.443	ENSCAFG00020021639	SND1	100	83.443	Canis_lupus_dingo
ENSMALG00000012071	snd1	98	84.162	ENSCHIG00000023390	SND1	100	83.333	Capra_hircus
ENSMALG00000012071	snd1	71	86.842	ENSTSYG00000004979	SND1	96	86.842	Carlito_syrichta
ENSMALG00000012071	snd1	98	73.526	ENSCAPG00000010677	SND1	98	73.526	Cavia_aperea
ENSMALG00000012071	snd1	98	83.929	ENSCPOG00000006251	SND1	100	83.114	Cavia_porcellus
ENSMALG00000012071	snd1	98	84.040	ENSCCAG00000036847	SND1	100	83.224	Cebus_capucinus
ENSMALG00000012071	snd1	98	84.152	ENSCATG00000035214	SND1	100	83.333	Cercocebus_atys
ENSMALG00000012071	snd1	99	84.093	ENSCLAG00000011796	SND1	100	83.333	Chinchilla_lanigera
ENSMALG00000012071	snd1	98	84.152	ENSCSAG00000010182	SND1	100	83.333	Chlorocebus_sabaeus
ENSMALG00000012071	snd1	79	74.510	ENSCHOG00000002218	SND1	86	74.510	Choloepus_hoffmanni
ENSMALG00000012071	snd1	100	82.986	ENSCPBG00000018094	SND1	100	82.986	Chrysemys_picta_bellii
ENSMALG00000012071	snd1	98	56.921	ENSCING00000000524	-	99	56.379	Ciona_intestinalis
ENSMALG00000012071	snd1	99	57.143	ENSCSAVG00000008807	-	99	57.143	Ciona_savignyi
ENSMALG00000012071	snd1	98	84.152	ENSCANG00000035119	SND1	100	83.333	Colobus_angolensis_palliatus
ENSMALG00000012071	snd1	98	83.817	ENSCGRG00001022514	Snd1	98	85.235	Cricetulus_griseus_chok1gshd
ENSMALG00000012071	snd1	97	83.860	ENSCGRG00000012277	Snd1	99	83.860	Cricetulus_griseus_crigri
ENSMALG00000012071	snd1	100	93.304	ENSCSEG00000008661	snd1	100	93.304	Cynoglossus_semilaevis
ENSMALG00000012071	snd1	100	94.182	ENSCVAG00000010316	snd1	100	94.182	Cyprinodon_variegatus
ENSMALG00000012071	snd1	100	89.278	ENSDARG00000006766	snd1	99	91.549	Danio_rerio
ENSMALG00000012071	snd1	97	82.115	ENSDNOG00000006795	SND1	100	82.115	Dasypus_novemcinctus
ENSMALG00000012071	snd1	98	83.929	ENSDORG00000000336	Snd1	100	83.114	Dipodomys_ordii
ENSMALG00000012071	snd1	98	51.246	FBgn0035121	Tudor-SN	98	51.246	Drosophila_melanogaster
ENSMALG00000012071	snd1	90	91.667	ENSETEG00000000375	SND1	92	91.667	Echinops_telfairi
ENSMALG00000012071	snd1	61	66.486	ENSEBUG00000014201	-	84	75.543	Eptatretus_burgeri
ENSMALG00000012071	snd1	98	82.766	ENSEASG00005008513	SND1	100	81.985	Equus_asinus_asinus
ENSMALG00000012071	snd1	98	83.929	ENSECAG00000011451	SND1	100	83.114	Equus_caballus
ENSMALG00000012071	snd1	100	73.904	ENSEEUG00000014737	SND1	100	73.904	Erinaceus_europaeus
ENSMALG00000012071	snd1	99	88.901	ENSELUG00000001805	snd1	96	88.901	Esox_lucius
ENSMALG00000012071	snd1	100	83.333	ENSFCAG00000008289	SND1	100	83.333	Felis_catus
ENSMALG00000012071	snd1	98	83.817	ENSFDAG00000015881	SND1	100	83.004	Fukomys_damarensis
ENSMALG00000012071	snd1	100	91.729	ENSFHEG00000004093	snd1	99	93.829	Fundulus_heteroclitus
ENSMALG00000012071	snd1	75	83.616	ENSGMOG00000018932	snd1	66	83.616	Gadus_morhua
ENSMALG00000012071	snd1	100	95.170	ENSGAFG00000008421	snd1	100	95.170	Gambusia_affinis
ENSMALG00000012071	snd1	100	60.656	ENSGACG00000019793	snd1	100	60.586	Gasterosteus_aculeatus
ENSMALG00000012071	snd1	98	84.152	ENSGGOG00000009614	SND1	100	83.333	Gorilla_gorilla
ENSMALG00000012071	snd1	100	94.182	ENSHBUG00000019135	snd1	100	94.182	Haplochromis_burtoni
ENSMALG00000012071	snd1	98	83.482	ENSHGLG00000003618	SND1	98	84.732	Heterocephalus_glaber_female
ENSMALG00000012071	snd1	99	83.113	ENSHGLG00100012449	SND1	99	83.113	Heterocephalus_glaber_male
ENSMALG00000012071	snd1	100	91.438	ENSHCOG00000005266	snd1	100	91.438	Hippocampus_comes
ENSMALG00000012071	snd1	99	88.913	ENSIPUG00000013279	snd1	99	88.913	Ictalurus_punctatus
ENSMALG00000012071	snd1	98	84.040	ENSSTOG00000002140	SND1	100	83.224	Ictidomys_tridecemlineatus
ENSMALG00000012071	snd1	98	84.040	ENSJJAG00000009561	Snd1	100	83.224	Jaculus_jaculus
ENSMALG00000012071	snd1	100	94.951	ENSKMAG00000016997	snd1	100	94.951	Kryptolebias_marmoratus
ENSMALG00000012071	snd1	100	93.963	ENSLBEG00000013563	snd1	100	93.963	Labrus_bergylta
ENSMALG00000012071	snd1	99	88.644	ENSLOCG00000015537	snd1	99	88.030	Lepisosteus_oculatus
ENSMALG00000012071	snd1	100	83.333	ENSLAFG00000009696	SND1	100	83.333	Loxodonta_africana
ENSMALG00000012071	snd1	98	84.152	ENSMFAG00000038114	SND1	100	83.333	Macaca_fascicularis
ENSMALG00000012071	snd1	98	84.152	ENSMMUG00000015432	SND1	100	83.333	Macaca_mulatta
ENSMALG00000012071	snd1	98	84.152	ENSMNEG00000039808	SND1	100	84.216	Macaca_nemestrina
ENSMALG00000012071	snd1	98	84.040	ENSMLEG00000029040	SND1	100	84.104	Mandrillus_leucophaeus
ENSMALG00000012071	snd1	100	94.841	ENSMAMG00000011739	snd1	100	94.841	Mastacembelus_armatus
ENSMALG00000012071	snd1	100	94.292	ENSMZEG00005005681	snd1	100	94.292	Maylandia_zebra
ENSMALG00000012071	snd1	98	83.817	ENSMICG00000000097	SND1	100	83.004	Microcebus_murinus
ENSMALG00000012071	snd1	98	84.263	ENSMOCG00000005040	Snd1	100	83.443	Microtus_ochrogaster
ENSMALG00000012071	snd1	100	94.731	ENSMMOG00000001795	snd1	100	94.731	Mola_mola
ENSMALG00000012071	snd1	98	83.371	ENSMODG00000015182	SND1	100	82.566	Monodelphis_domestica
ENSMALG00000012071	snd1	98	83.817	MGP_CAROLIEiJ_G0028159	Snd1	99	84.874	Mus_caroli
ENSMALG00000012071	snd1	98	83.594	ENSMUSG00000001424	Snd1	100	82.785	Mus_musculus
ENSMALG00000012071	snd1	98	83.817	MGP_PahariEiJ_G0021917	Snd1	100	84.874	Mus_pahari
ENSMALG00000012071	snd1	98	83.817	MGP_SPRETEiJ_G0029159	Snd1	100	83.004	Mus_spretus
ENSMALG00000012071	snd1	100	83.224	ENSMPUG00000006545	SND1	100	83.224	Mustela_putorius_furo
ENSMALG00000012071	snd1	97	82.943	ENSMLUG00000017130	SND1	99	82.943	Myotis_lucifugus
ENSMALG00000012071	snd1	98	83.929	ENSNGAG00000011186	Snd1	100	83.114	Nannospalax_galili
ENSMALG00000012071	snd1	100	94.292	ENSNBRG00000006681	snd1	100	94.292	Neolamprologus_brichardi
ENSMALG00000012071	snd1	100	83.224	ENSNLEG00000012263	SND1	99	85.378	Nomascus_leucogenys
ENSMALG00000012071	snd1	91	91.667	ENSOPRG00000013405	SND1	92	91.667	Ochotona_princeps
ENSMALG00000012071	snd1	99	84.205	ENSODEG00000011502	SND1	100	83.205	Octodon_degus
ENSMALG00000012071	snd1	100	94.512	ENSONIG00000011481	snd1	97	94.512	Oreochromis_niloticus
ENSMALG00000012071	snd1	98	83.146	ENSOANG00000000817	SND1	98	83.146	Ornithorhynchus_anatinus
ENSMALG00000012071	snd1	100	82.785	ENSOCUG00000001620	SND1	100	82.785	Oryctolagus_cuniculus
ENSMALG00000012071	snd1	100	93.085	ENSORLG00000015201	snd1	100	93.085	Oryzias_latipes
ENSMALG00000012071	snd1	100	93.304	ENSORLG00020013991	snd1	100	93.304	Oryzias_latipes_hni
ENSMALG00000012071	snd1	100	93.304	ENSORLG00015012436	snd1	100	93.304	Oryzias_latipes_hsok
ENSMALG00000012071	snd1	100	93.085	ENSOMEG00000006406	snd1	100	93.085	Oryzias_melastigma
ENSMALG00000012071	snd1	98	83.742	ENSOGAG00000013356	SND1	94	82.932	Otolemur_garnettii
ENSMALG00000012071	snd1	97	81.736	ENSOARG00000002149	SND1	100	81.736	Ovis_aries
ENSMALG00000012071	snd1	98	84.040	ENSPPAG00000042947	SND1	100	83.224	Pan_paniscus
ENSMALG00000012071	snd1	100	83.333	ENSPPRG00000004494	SND1	100	83.333	Panthera_pardus
ENSMALG00000012071	snd1	100	83.224	ENSPTIG00000014214	SND1	100	83.224	Panthera_tigris_altaica
ENSMALG00000012071	snd1	98	84.040	ENSPTRG00000023911	SND1	100	83.224	Pan_troglodytes
ENSMALG00000012071	snd1	97	84.199	ENSPANG00000011997	SND1	99	84.199	Papio_anubis
ENSMALG00000012071	snd1	99	87.004	ENSPKIG00000023494	snd1	99	86.587	Paramormyrops_kingsleyae
ENSMALG00000012071	snd1	93	94.019	ENSPMGG00000003629	snd1	100	94.019	Periophthalmus_magnuspinnatus
ENSMALG00000012071	snd1	98	84.040	ENSPEMG00000010240	Snd1	100	83.224	Peromyscus_maniculatus_bairdii
ENSMALG00000012071	snd1	97	73.928	ENSPMAG00000007915	-	99	73.928	Petromyzon_marinus
ENSMALG00000012071	snd1	98	83.931	ENSPCIG00000011561	SND1	100	83.114	Phascolarctos_cinereus
ENSMALG00000012071	snd1	100	94.621	ENSPFOG00000001557	snd1	100	94.621	Poecilia_formosa
ENSMALG00000012071	snd1	100	94.621	ENSPLAG00000018459	snd1	97	94.621	Poecilia_latipinna
ENSMALG00000012071	snd1	100	94.841	ENSPMEG00000006803	snd1	100	94.841	Poecilia_mexicana
ENSMALG00000012071	snd1	100	94.621	ENSPREG00000002189	snd1	100	94.621	Poecilia_reticulata
ENSMALG00000012071	snd1	91	91.667	ENSPPYG00000017972	SND1	100	91.667	Pongo_abelii
ENSMALG00000012071	snd1	98	74.219	ENSPCAG00000011305	SND1	100	73.575	Procavia_capensis
ENSMALG00000012071	snd1	98	83.929	ENSPCOG00000026791	SND1	100	83.991	Propithecus_coquereli
ENSMALG00000012071	snd1	98	81.920	ENSPVAG00000013945	SND1	100	81.140	Pteropus_vampyrus
ENSMALG00000012071	snd1	100	94.182	ENSPNYG00000000932	snd1	100	94.182	Pundamilia_nyererei
ENSMALG00000012071	snd1	99	90.440	ENSPNAG00000001206	snd1	99	90.440	Pygocentrus_nattereri
ENSMALG00000012071	snd1	98	83.705	ENSRNOG00000031173	Snd1	100	82.864	Rattus_norvegicus
ENSMALG00000012071	snd1	71	87.266	ENSRBIG00000027782	-	93	87.311	Rhinopithecus_bieti
ENSMALG00000012071	snd1	98	84.152	ENSRROG00000033020	SND1	100	83.333	Rhinopithecus_roxellana
ENSMALG00000012071	snd1	100	82.327	ENSSBOG00000032461	SND1	100	83.224	Saimiri_boliviensis_boliviensis
ENSMALG00000012071	snd1	98	80.674	ENSSHAG00000015359	SND1	100	80.674	Sarcophilus_harrisii
ENSMALG00000012071	snd1	98	89.024	ENSSFOG00015001103	snd1	99	88.344	Scleropages_formosus
ENSMALG00000012071	snd1	100	94.182	ENSSMAG00000001932	snd1	95	94.182	Scophthalmus_maximus
ENSMALG00000012071	snd1	100	95.609	ENSSDUG00000002699	snd1	94	95.609	Seriola_dumerili
ENSMALG00000012071	snd1	100	88.145	ENSSLDG00000001950	snd1	100	88.145	Seriola_lalandi_dorsalis
ENSMALG00000012071	snd1	87	79.087	ENSSARG00000004877	SND1	92	79.087	Sorex_araneus
ENSMALG00000012071	snd1	71	79.896	ENSSPUG00000017586	SND1	96	79.896	Sphenodon_punctatus
ENSMALG00000012071	snd1	74	94.924	ENSSPAG00000021398	snd1	99	94.924	Stegastes_partitus
ENSMALG00000012071	snd1	98	83.929	ENSSSCG00000016590	SND1	100	83.114	Sus_scrofa
ENSMALG00000012071	snd1	100	92.450	ENSTRUG00000014067	snd1	100	91.667	Takifugu_rubripes
ENSMALG00000012071	snd1	100	92.097	ENSTNIG00000011019	snd1	100	92.097	Tetraodon_nigroviridis
ENSMALG00000012071	snd1	95	78.000	ENSTBEG00000003999	SND1	100	78.000	Tupaia_belangeri
ENSMALG00000012071	snd1	98	79.688	ENSTTRG00000006059	SND1	100	78.947	Tursiops_truncatus
ENSMALG00000012071	snd1	72	76.762	ENSUAMG00000002820	-	89	76.762	Ursus_americanus
ENSMALG00000012071	snd1	87	82.890	ENSUAMG00000005604	-	93	82.890	Ursus_americanus
ENSMALG00000012071	snd1	100	83.224	ENSUMAG00000005960	SND1	100	83.224	Ursus_maritimus
ENSMALG00000012071	snd1	77	91.667	ENSVPAG00000008302	SND1	74	91.667	Vicugna_pacos
ENSMALG00000012071	snd1	100	83.333	ENSVVUG00000007226	SND1	100	83.333	Vulpes_vulpes
ENSMALG00000012071	snd1	97	79.707	ENSXETG00000023043	snd1	100	79.452	Xenopus_tropicalis
ENSMALG00000012071	snd1	93	93.293	ENSXCOG00000013629	snd1	99	92.637	Xiphophorus_couchianus
ENSMALG00000012071	snd1	100	95.719	ENSXMAG00000011469	snd1	100	95.719	Xiphophorus_maculatus