EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000012508 (Gene tree)
Gene ID: 109974326
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 16151 bases
Position: chrKV885016.1:593667-609817
Accession: 109974326
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000017977	GTP_EFTU	PF00009.27	4.1e-63	1	1
ENSMALP00000017977	GTP_EFTU_D2	PF03144.25	6.3e-17	1	1
ENSMALP00000017977	EFG_IV	PF03764.18	3.7e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000018326	-	2226	XM_020624474	ENSMALP00000017977	741 (aa)	XP_020480130	-

Gene Model

Click here to download ENSMALG00000012508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000012508's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000012508	gfm1	57	33.333	ENSMALG00000011894	guf1	68	33.498
ENSMALG00000012508	gfm1	68	37.584	ENSMALG00000021333	eef2b	64	37.584
ENSMALG00000012508	gfm1	58	31.098	ENSMALG00000014501	eftud2	57	31.098
ENSMALG00000012508	gfm1	92	33.564	ENSMALG00000010323	gfm2	92	33.703

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000012508	gfm1	95	80.223	ENSG00000168827	GFM1	100	91.667	Homo_sapiens
ENSMALG00000012508	gfm1	89	86.377	ENSAPOG00000016489	gfm1	96	86.377	Acanthochromis_polyacanthus
ENSMALG00000012508	gfm1	96	81.389	ENSAMEG00000013542	GFM1	99	79.704	Ailuropoda_melanoleuca
ENSMALG00000012508	gfm1	99	82.591	ENSACIG00000014465	gfm1	96	82.591	Amphilophus_citrinellus
ENSMALG00000012508	gfm1	95	88.408	ENSAOCG00000006023	gfm1	96	88.408	Amphiprion_ocellaris
ENSMALG00000012508	gfm1	95	89.155	ENSAPEG00000024499	gfm1	99	89.155	Amphiprion_percula
ENSMALG00000012508	gfm1	95	89.540	ENSATEG00000013789	gfm1	96	89.540	Anabas_testudineus
ENSMALG00000012508	gfm1	95	80.365	ENSAPLG00000005022	GFM1	98	80.365	Anas_platyrhynchos
ENSMALG00000012508	gfm1	95	80.618	ENSACAG00000006829	GFM1	96	80.618	Anolis_carolinensis
ENSMALG00000012508	gfm1	99	78.735	ENSANAG00000035983	GFM1	99	78.735	Aotus_nancymaae
ENSMALG00000012508	gfm1	95	89.819	ENSACLG00000016586	gfm1	99	87.106	Astatotilapia_calliptera
ENSMALG00000012508	gfm1	95	85.294	ENSAMXG00000013435	gfm1	96	85.294	Astyanax_mexicanus
ENSMALG00000012508	gfm1	96	80.529	ENSBTAG00000027795	GFM1	99	78.763	Bos_taurus
ENSMALG00000012508	gfm1	93	57.571	WBGene00009246	gfm-1	95	57.123	Caenorhabditis_elegans
ENSMALG00000012508	gfm1	99	79.139	ENSCJAG00000000363	GFM1	99	79.139	Callithrix_jacchus
ENSMALG00000012508	gfm1	98	80.245	ENSCAFG00000009006	GFM1	100	81.213	Canis_familiaris
ENSMALG00000012508	gfm1	95	81.616	ENSCAFG00020005878	GFM1	98	81.616	Canis_lupus_dingo
ENSMALG00000012508	gfm1	96	80.668	ENSCHIG00000015220	GFM1	99	78.898	Capra_hircus
ENSMALG00000012508	gfm1	99	78.533	ENSTSYG00000002013	GFM1	99	78.533	Carlito_syrichta
ENSMALG00000012508	gfm1	96	69.379	ENSCAPG00000005699	GFM1	97	69.379	Cavia_aperea
ENSMALG00000012508	gfm1	98	78.397	ENSCPOG00000001194	GFM1	98	78.397	Cavia_porcellus
ENSMALG00000012508	gfm1	99	78.869	ENSCCAG00000025561	GFM1	99	78.869	Cebus_capucinus
ENSMALG00000012508	gfm1	99	78.331	ENSCATG00000037622	GFM1	99	78.331	Cercocebus_atys
ENSMALG00000012508	gfm1	96	79.167	ENSCLAG00000002503	GFM1	95	79.167	Chinchilla_lanigera
ENSMALG00000012508	gfm1	99	78.197	ENSCSAG00000012162	GFM1	99	78.197	Chlorocebus_sabaeus
ENSMALG00000012508	gfm1	95	72.145	ENSCHOG00000004867	GFM1	95	72.145	Choloepus_hoffmanni
ENSMALG00000012508	gfm1	95	81.039	ENSCPBG00000018367	GFM1	95	81.039	Chrysemys_picta_bellii
ENSMALG00000012508	gfm1	94	59.161	ENSCING00000011960	-	93	59.161	Ciona_intestinalis
ENSMALG00000012508	gfm1	95	60.556	ENSCSAVG00000008514	-	99	60.556	Ciona_savignyi
ENSMALG00000012508	gfm1	95	80.084	ENSCANG00000031714	GFM1	99	78.197	Colobus_angolensis_palliatus
ENSMALG00000012508	gfm1	95	80.893	ENSCGRG00001022095	GFM1	95	80.893	Cricetulus_griseus_chok1gshd
ENSMALG00000012508	gfm1	95	80.893	ENSCGRG00000012043	GFM1	95	80.893	Cricetulus_griseus_crigri
ENSMALG00000012508	gfm1	95	81.729	ENSCSEG00000017088	gfm1	98	81.729	Cynoglossus_semilaevis
ENSMALG00000012508	gfm1	95	90.363	ENSCVAG00000004126	gfm1	100	88.671	Cyprinodon_variegatus
ENSMALG00000012508	gfm1	95	82.845	ENSDARG00000063624	gfm1	96	82.845	Danio_rerio
ENSMALG00000012508	gfm1	54	80.201	ENSDNOG00000016385	-	98	80.201	Dasypus_novemcinctus
ENSMALG00000012508	gfm1	99	77.212	ENSDORG00000014165	Gfm1	99	77.212	Dipodomys_ordii
ENSMALG00000012508	gfm1	96	68.100	FBgn0263133	mEFG1	97	68.100	Drosophila_melanogaster
ENSMALG00000012508	gfm1	98	72.027	ENSETEG00000019197	GFM1	99	71.754	Echinops_telfairi
ENSMALG00000012508	gfm1	90	63.393	ENSEBUG00000012794	gfm1	99	63.393	Eptatretus_burgeri
ENSMALG00000012508	gfm1	88	66.532	ENSEEUG00000000429	GFM1	90	66.532	Erinaceus_europaeus
ENSMALG00000012508	gfm1	95	85.914	ENSELUG00000014728	gfm1	96	85.914	Esox_lucius
ENSMALG00000012508	gfm1	96	80.694	ENSFCAG00000013291	GFM1	99	78.926	Felis_catus
ENSMALG00000012508	gfm1	90	80.000	ENSFALG00000007619	GFM1	100	80.000	Ficedula_albicollis
ENSMALG00000012508	gfm1	98	78.804	ENSFDAG00000016559	GFM1	98	78.804	Fukomys_damarensis
ENSMALG00000012508	gfm1	95	88.006	ENSFHEG00000006091	gfm1	96	88.006	Fundulus_heteroclitus
ENSMALG00000012508	gfm1	95	85.477	ENSGMOG00000010161	gfm1	99	85.477	Gadus_morhua
ENSMALG00000012508	gfm1	95	81.320	ENSGALG00000009634	GFM1	96	81.320	Gallus_gallus
ENSMALG00000012508	gfm1	95	87.727	ENSGAFG00000012527	gfm1	96	87.727	Gambusia_affinis
ENSMALG00000012508	gfm1	95	88.006	ENSGACG00000009864	gfm1	96	88.006	Gasterosteus_aculeatus
ENSMALG00000012508	gfm1	95	80.501	ENSGGOG00000003085	GFM1	99	78.600	Gorilla_gorilla
ENSMALG00000012508	gfm1	95	89.958	ENSHBUG00000002120	gfm1	96	89.958	Haplochromis_burtoni
ENSMALG00000012508	gfm1	98	78.125	ENSHGLG00000016855	GFM1	98	78.125	Heterocephalus_glaber_female
ENSMALG00000012508	gfm1	98	78.125	ENSHGLG00100013049	GFM1	98	78.125	Heterocephalus_glaber_male
ENSMALG00000012508	gfm1	95	87.849	ENSHCOG00000007638	gfm1	97	87.614	Hippocampus_comes
ENSMALG00000012508	gfm1	96	84.284	ENSIPUG00000005873	gfm1	96	84.284	Ictalurus_punctatus
ENSMALG00000012508	gfm1	95	79.248	ENSSTOG00000010150	GFM1	97	79.248	Ictidomys_tridecemlineatus
ENSMALG00000012508	gfm1	99	77.823	ENSJJAG00000016447	Gfm1	99	77.823	Jaculus_jaculus
ENSMALG00000012508	gfm1	97	85.383	ENSKMAG00000020768	gfm1	96	86.611	Kryptolebias_marmoratus
ENSMALG00000012508	gfm1	93	87.874	ENSLBEG00000021315	gfm1	100	87.874	Labrus_bergylta
ENSMALG00000012508	gfm1	95	81.032	ENSLACG00000012295	GFM1	97	81.032	Latimeria_chalumnae
ENSMALG00000012508	gfm1	95	79.057	ENSLOCG00000003778	gfm1	99	79.057	Lepisosteus_oculatus
ENSMALG00000012508	gfm1	95	78.830	ENSLAFG00000010945	GFM1	99	77.298	Loxodonta_africana
ENSMALG00000012508	gfm1	99	78.062	ENSMFAG00000035731	GFM1	99	78.062	Macaca_fascicularis
ENSMALG00000012508	gfm1	99	78.062	ENSMMUG00000004961	GFM1	99	78.062	Macaca_mulatta
ENSMALG00000012508	gfm1	99	77.927	ENSMNEG00000033245	GFM1	99	77.927	Macaca_nemestrina
ENSMALG00000012508	gfm1	95	78.412	ENSMLEG00000030908	GFM1	99	77.883	Mandrillus_leucophaeus
ENSMALG00000012508	gfm1	95	90.516	ENSMAMG00000011760	gfm1	96	90.516	Mastacembelus_armatus
ENSMALG00000012508	gfm1	95	89.958	ENSMZEG00005016639	gfm1	96	89.958	Maylandia_zebra
ENSMALG00000012508	gfm1	95	81.039	ENSMGAG00000010641	GFM1	96	81.039	Meleagris_gallopavo
ENSMALG00000012508	gfm1	95	81.032	ENSMAUG00000000611	Gfm1	95	81.032	Mesocricetus_auratus
ENSMALG00000012508	gfm1	95	81.198	ENSMICG00000049086	GFM1	95	81.198	Microcebus_murinus
ENSMALG00000012508	gfm1	95	80.753	ENSMOCG00000000465	Gfm1	95	80.753	Microtus_ochrogaster
ENSMALG00000012508	gfm1	99	85.637	ENSMMOG00000012538	gfm1	99	85.637	Mola_mola
ENSMALG00000012508	gfm1	95	80.337	ENSMODG00000015673	GFM1	96	80.337	Monodelphis_domestica
ENSMALG00000012508	gfm1	95	81.032	MGP_CAROLIEiJ_G0025052	Gfm1	95	81.032	Mus_caroli
ENSMALG00000012508	gfm1	95	81.032	ENSMUSG00000027774	Gfm1	95	81.032	Mus_musculus
ENSMALG00000012508	gfm1	95	81.180	MGP_PahariEiJ_G0026495	Gfm1	95	81.180	Mus_pahari
ENSMALG00000012508	gfm1	95	81.032	MGP_SPRETEiJ_G0025994	Gfm1	95	81.032	Mus_spretus
ENSMALG00000012508	gfm1	99	79.144	ENSMPUG00000002859	GFM1	98	79.144	Mustela_putorius_furo
ENSMALG00000012508	gfm1	99	79.195	ENSMLUG00000000452	GFM1	99	79.195	Myotis_lucifugus
ENSMALG00000012508	gfm1	95	80.056	ENSNGAG00000012375	Gfm1	96	80.056	Nannospalax_galili
ENSMALG00000012508	gfm1	97	88.996	ENSNBRG00000004631	gfm1	99	88.996	Neolamprologus_brichardi
ENSMALG00000012508	gfm1	95	80.501	ENSNLEG00000004176	GFM1	99	78.466	Nomascus_leucogenys
ENSMALG00000012508	gfm1	90	71.534	ENSMEUG00000007784	GFM1	99	71.534	Notamacropus_eugenii
ENSMALG00000012508	gfm1	97	78.846	ENSOPRG00000009860	GFM1	98	78.846	Ochotona_princeps
ENSMALG00000012508	gfm1	98	79.076	ENSODEG00000004316	GFM1	98	79.076	Octodon_degus
ENSMALG00000012508	gfm1	95	89.819	ENSONIG00000003772	gfm1	96	89.819	Oreochromis_niloticus
ENSMALG00000012508	gfm1	99	78.610	ENSOCUG00000013561	GFM1	98	78.610	Oryctolagus_cuniculus
ENSMALG00000012508	gfm1	94	88.418	ENSORLG00000006487	gfm1	100	88.418	Oryzias_latipes
ENSMALG00000012508	gfm1	95	88.145	ENSORLG00020003362	gfm1	96	88.145	Oryzias_latipes_hni
ENSMALG00000012508	gfm1	95	88.563	ENSORLG00015005829	gfm1	96	88.563	Oryzias_latipes_hsok
ENSMALG00000012508	gfm1	95	88.842	ENSOMEG00000012894	gfm1	96	88.842	Oryzias_melastigma
ENSMALG00000012508	gfm1	99	78.121	ENSOGAG00000008298	GFM1	99	78.121	Otolemur_garnettii
ENSMALG00000012508	gfm1	96	80.194	ENSOARG00000002409	GFM1	99	80.194	Ovis_aries
ENSMALG00000012508	gfm1	95	80.501	ENSPPAG00000033881	GFM1	99	78.600	Pan_paniscus
ENSMALG00000012508	gfm1	96	80.694	ENSPPRG00000009281	GFM1	99	78.926	Panthera_pardus
ENSMALG00000012508	gfm1	96	80.556	ENSPTIG00000012416	GFM1	99	78.792	Panthera_tigris_altaica
ENSMALG00000012508	gfm1	95	80.501	ENSPTRG00000015570	GFM1	99	78.600	Pan_troglodytes
ENSMALG00000012508	gfm1	99	77.927	ENSPANG00000016512	GFM1	99	77.927	Papio_anubis
ENSMALG00000012508	gfm1	97	83.060	ENSPKIG00000004876	gfm1	98	83.060	Paramormyrops_kingsleyae
ENSMALG00000012508	gfm1	98	79.459	ENSPSIG00000012567	GFM1	99	79.459	Pelodiscus_sinensis
ENSMALG00000012508	gfm1	95	86.630	ENSPMGG00000014068	gfm1	99	86.630	Periophthalmus_magnuspinnatus
ENSMALG00000012508	gfm1	95	80.614	ENSPEMG00000008942	Gfm1	95	80.614	Peromyscus_maniculatus_bairdii
ENSMALG00000012508	gfm1	84	77.229	ENSPCIG00000020195	GFM1	96	78.827	Phascolarctos_cinereus
ENSMALG00000012508	gfm1	95	88.145	ENSPFOG00000011022	gfm1	96	88.145	Poecilia_formosa
ENSMALG00000012508	gfm1	95	88.424	ENSPLAG00000019585	gfm1	96	87.812	Poecilia_latipinna
ENSMALG00000012508	gfm1	95	88.006	ENSPMEG00000012376	gfm1	96	88.006	Poecilia_mexicana
ENSMALG00000012508	gfm1	99	84.941	ENSPREG00000001332	gfm1	96	84.941	Poecilia_reticulata
ENSMALG00000012508	gfm1	95	80.223	ENSPPYG00000014244	GFM1	99	78.331	Pongo_abelii
ENSMALG00000012508	gfm1	93	79.226	ENSPCAG00000008934	GFM1	99	79.226	Procavia_capensis
ENSMALG00000012508	gfm1	98	79.484	ENSPCOG00000022259	GFM1	99	79.060	Propithecus_coquereli
ENSMALG00000012508	gfm1	96	80.139	ENSPVAG00000013605	GFM1	99	78.389	Pteropus_vampyrus
ENSMALG00000012508	gfm1	97	88.721	ENSPNYG00000006037	gfm1	98	88.721	Pundamilia_nyererei
ENSMALG00000012508	gfm1	95	85.774	ENSPNAG00000001237	gfm1	97	85.774	Pygocentrus_nattereri
ENSMALG00000012508	gfm1	95	81.032	ENSRNOG00000012873	Gfm1	95	81.032	Rattus_norvegicus
ENSMALG00000012508	gfm1	95	79.944	ENSRBIG00000031363	GFM1	99	78.062	Rhinopithecus_bieti
ENSMALG00000012508	gfm1	95	80.084	ENSRROG00000031081	GFM1	99	78.197	Rhinopithecus_roxellana
ENSMALG00000012508	gfm1	95	55.105	YLR069C	-	93	55.105	Saccharomyces_cerevisiae
ENSMALG00000012508	gfm1	99	79.004	ENSSBOG00000023252	GFM1	99	79.004	Saimiri_boliviensis_boliviensis
ENSMALG00000012508	gfm1	95	81.882	ENSSHAG00000017772	GFM1	95	81.882	Sarcophilus_harrisii
ENSMALG00000012508	gfm1	95	84.240	ENSSFOG00015003117	gfm1	99	83.611	Scleropages_formosus
ENSMALG00000012508	gfm1	97	87.895	ENSSMAG00000013221	gfm1	97	87.895	Scophthalmus_maximus
ENSMALG00000012508	gfm1	95	89.958	ENSSDUG00000018665	gfm1	96	89.958	Seriola_dumerili
ENSMALG00000012508	gfm1	95	89.819	ENSSLDG00000020606	gfm1	96	89.819	Seriola_lalandi_dorsalis
ENSMALG00000012508	gfm1	95	79.635	ENSSPUG00000018686	GFM1	96	79.635	Sphenodon_punctatus
ENSMALG00000012508	gfm1	95	89.819	ENSSPAG00000008800	gfm1	96	89.819	Stegastes_partitus
ENSMALG00000012508	gfm1	98	78.437	ENSSSCG00000025651	GFM1	99	78.360	Sus_scrofa
ENSMALG00000012508	gfm1	98	84.303	ENSTRUG00000009244	gfm1	99	84.303	Takifugu_rubripes
ENSMALG00000012508	gfm1	95	88.424	ENSTNIG00000007729	gfm1	96	88.424	Tetraodon_nigroviridis
ENSMALG00000012508	gfm1	89	72.444	ENSTBEG00000017404	GFM1	89	72.444	Tupaia_belangeri
ENSMALG00000012508	gfm1	95	80.532	ENSTTRG00000001735	GFM1	94	80.532	Tursiops_truncatus
ENSMALG00000012508	gfm1	98	79.484	ENSUAMG00000026381	GFM1	99	79.060	Ursus_americanus
ENSMALG00000012508	gfm1	98	79.484	ENSUMAG00000011268	GFM1	99	79.060	Ursus_maritimus
ENSMALG00000012508	gfm1	98	76.550	ENSVPAG00000009444	GFM1	99	76.478	Vicugna_pacos
ENSMALG00000012508	gfm1	95	81.564	ENSVVUG00000020091	GFM1	100	81.065	Vulpes_vulpes
ENSMALG00000012508	gfm1	95	82.633	ENSXETG00000032551	GFM1	95	82.633	Xenopus_tropicalis
ENSMALG00000012508	gfm1	51	86.528	ENSXCOG00000012590	gfm1	89	86.528	Xiphophorus_couchianus
ENSMALG00000012508	gfm1	95	88.145	ENSXMAG00000000261	gfm1	96	88.145	Xiphophorus_maculatus