EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000012571 (Gene tree)
Gene ID: 109967868
Gene Symbol: pop4
Alias: zgc:110597
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 11188 bases
Position: chrKV884825.1:387913-399100
Accession: 109967868
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000018013	UPF0086	PF01868.16	4.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000018362	-	5057	XM_020613734	ENSMALP00000018013	221 (aa)	XP_020469390	UPI0009B38D52

Gene Model

Click here to download ENSMALG00000012571's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03008	Ribosome biogenesis in eukaryotes	KEGG
malb03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000012571's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000012571	pop4	92	63.547	ENSG00000105171	POP4	100	73.958	Homo_sapiens
ENSMALG00000012571	pop4	95	56.132	ENSAMEG00000003172	-	95	55.189	Ailuropoda_melanoleuca
ENSMALG00000012571	pop4	95	60.952	ENSAMEG00000018329	-	95	60.952	Ailuropoda_melanoleuca
ENSMALG00000012571	pop4	99	79.452	ENSACIG00000008358	pop4	99	79.452	Amphilophus_citrinellus
ENSMALG00000012571	pop4	90	84.577	ENSAOCG00000010116	pop4	98	84.577	Amphiprion_ocellaris
ENSMALG00000012571	pop4	100	81.696	ENSAPEG00000002829	pop4	94	81.250	Amphiprion_percula
ENSMALG00000012571	pop4	99	85.520	ENSATEG00000013028	pop4	99	85.520	Anabas_testudineus
ENSMALG00000012571	pop4	92	61.576	ENSAPLG00000014051	POP4	98	61.881	Anas_platyrhynchos
ENSMALG00000012571	pop4	92	64.532	ENSANAG00000020295	POP4	92	64.532	Aotus_nancymaae
ENSMALG00000012571	pop4	100	78.733	ENSACLG00000000526	pop4	100	78.733	Astatotilapia_calliptera
ENSMALG00000012571	pop4	100	70.588	ENSAMXG00000002899	pop4	100	70.588	Astyanax_mexicanus
ENSMALG00000012571	pop4	95	63.810	ENSBTAG00000002223	POP4	95	63.810	Bos_taurus
ENSMALG00000012571	pop4	96	63.380	ENSCJAG00000046750	POP4	95	70.760	Callithrix_jacchus
ENSMALG00000012571	pop4	77	67.647	ENSCAFG00000007630	POP4	93	67.647	Canis_familiaris
ENSMALG00000012571	pop4	95	62.381	ENSCHIG00000016743	POP4	95	62.381	Capra_hircus
ENSMALG00000012571	pop4	94	62.319	ENSTSYG00000003488	POP4	95	61.905	Carlito_syrichta
ENSMALG00000012571	pop4	95	45.238	ENSCAPG00000011105	POP4	96	45.238	Cavia_aperea
ENSMALG00000012571	pop4	94	62.319	ENSCPOG00000002992	POP4	95	61.905	Cavia_porcellus
ENSMALG00000012571	pop4	96	61.792	ENSCCAG00000020285	-	96	61.792	Cebus_capucinus
ENSMALG00000012571	pop4	86	56.085	ENSCCAG00000034244	-	87	56.085	Cebus_capucinus
ENSMALG00000012571	pop4	96	62.736	ENSCATG00000036022	POP4	100	75.000	Cercocebus_atys
ENSMALG00000012571	pop4	94	62.802	ENSCLAG00000013162	POP4	95	62.381	Chinchilla_lanigera
ENSMALG00000012571	pop4	96	62.736	ENSCSAG00000004868	POP4	97	62.736	Chlorocebus_sabaeus
ENSMALG00000012571	pop4	95	45.714	ENSCHOG00000002071	POP4	97	45.714	Choloepus_hoffmanni
ENSMALG00000012571	pop4	99	58.904	ENSCPBG00000016132	POP4	99	58.904	Chrysemys_picta_bellii
ENSMALG00000012571	pop4	62	35.766	ENSCING00000023871	-	66	35.766	Ciona_intestinalis
ENSMALG00000012571	pop4	88	65.641	ENSCANG00000005924	POP4	97	65.641	Colobus_angolensis_palliatus
ENSMALG00000012571	pop4	94	62.802	ENSCGRG00001017185	Pop4	94	61.905	Cricetulus_griseus_chok1gshd
ENSMALG00000012571	pop4	94	62.802	ENSCGRG00000008155	Pop4	94	61.905	Cricetulus_griseus_crigri
ENSMALG00000012571	pop4	99	73.973	ENSCSEG00000002946	pop4	99	74.429	Cynoglossus_semilaevis
ENSMALG00000012571	pop4	100	54.260	ENSCVAG00000018602	POP4	96	54.260	Cyprinodon_variegatus
ENSMALG00000012571	pop4	99	68.037	ENSDARG00000101472	pop4	99	67.123	Danio_rerio
ENSMALG00000012571	pop4	99	59.817	ENSDNOG00000047663	POP4	84	61.905	Dasypus_novemcinctus
ENSMALG00000012571	pop4	76	55.090	ENSDORG00000008577	Pop4	97	55.090	Dipodomys_ordii
ENSMALG00000012571	pop4	98	50.230	ENSETEG00000003607	POP4	98	51.415	Echinops_telfairi
ENSMALG00000012571	pop4	95	44.444	ENSEBUG00000010447	pop4	87	43.304	Eptatretus_burgeri
ENSMALG00000012571	pop4	92	42.157	ENSEBUG00000008575	pop4	92	41.176	Eptatretus_burgeri
ENSMALG00000012571	pop4	98	39.565	ENSEBUG00000004305	pop4	100	38.428	Eptatretus_burgeri
ENSMALG00000012571	pop4	95	71.154	ENSECAG00000020206	POP4	78	71.154	Equus_caballus
ENSMALG00000012571	pop4	88	46.667	ENSEEUG00000013109	POP4	98	46.667	Erinaceus_europaeus
ENSMALG00000012571	pop4	99	69.406	ENSELUG00000019812	pop4	99	68.493	Esox_lucius
ENSMALG00000012571	pop4	95	62.857	ENSFCAG00000001619	POP4	95	62.857	Felis_catus
ENSMALG00000012571	pop4	100	59.276	ENSFALG00000000206	POP4	98	59.276	Ficedula_albicollis
ENSMALG00000012571	pop4	94	62.319	ENSFDAG00000017859	POP4	95	61.905	Fukomys_damarensis
ENSMALG00000012571	pop4	96	70.093	ENSFHEG00000012745	pop4	96	70.093	Fundulus_heteroclitus
ENSMALG00000012571	pop4	87	70.619	ENSGMOG00000000335	pop4	96	70.619	Gadus_morhua
ENSMALG00000012571	pop4	99	57.991	ENSGALG00000041972	POP4	92	57.991	Gallus_gallus
ENSMALG00000012571	pop4	80	69.832	ENSGAFG00000003571	pop4	99	69.274	Gambusia_affinis
ENSMALG00000012571	pop4	100	74.888	ENSGACG00000014510	pop4	100	81.522	Gasterosteus_aculeatus
ENSMALG00000012571	pop4	99	60.274	ENSGAGG00000024544	POP4	79	60.274	Gopherus_agassizii
ENSMALG00000012571	pop4	92	63.547	ENSGGOG00000038346	POP4	96	61.792	Gorilla_gorilla
ENSMALG00000012571	pop4	100	78.733	ENSHBUG00000021821	pop4	100	78.733	Haplochromis_burtoni
ENSMALG00000012571	pop4	94	62.319	ENSHGLG00000015798	POP4	95	61.905	Heterocephalus_glaber_female
ENSMALG00000012571	pop4	94	62.319	ENSHGLG00100009737	POP4	95	61.905	Heterocephalus_glaber_male
ENSMALG00000012571	pop4	100	75.566	ENSHCOG00000020937	pop4	100	75.566	Hippocampus_comes
ENSMALG00000012571	pop4	99	64.384	ENSIPUG00000013652	pop4	99	64.384	Ictalurus_punctatus
ENSMALG00000012571	pop4	100	61.538	ENSSTOG00000011016	POP4	100	61.538	Ictidomys_tridecemlineatus
ENSMALG00000012571	pop4	94	63.285	ENSJJAG00000013376	Pop4	95	62.857	Jaculus_jaculus
ENSMALG00000012571	pop4	100	82.511	ENSKMAG00000012250	pop4	100	81.166	Kryptolebias_marmoratus
ENSMALG00000012571	pop4	100	73.543	ENSLBEG00000018846	-	100	73.543	Labrus_bergylta
ENSMALG00000012571	pop4	100	73.543	ENSLBEG00000014139	pop4	100	73.543	Labrus_bergylta
ENSMALG00000012571	pop4	98	57.143	ENSLACG00000008581	POP4	98	57.143	Latimeria_chalumnae
ENSMALG00000012571	pop4	99	65.297	ENSLOCG00000005597	pop4	99	65.297	Lepisosteus_oculatus
ENSMALG00000012571	pop4	94	63.768	ENSLAFG00000000084	POP4	94	63.768	Loxodonta_africana
ENSMALG00000012571	pop4	96	62.736	ENSMFAG00000029606	POP4	96	62.736	Macaca_fascicularis
ENSMALG00000012571	pop4	96	62.441	ENSMMUG00000017424	POP4	96	62.441	Macaca_mulatta
ENSMALG00000012571	pop4	96	62.441	ENSMNEG00000031374	POP4	96	62.441	Macaca_nemestrina
ENSMALG00000012571	pop4	96	62.736	ENSMLEG00000043454	POP4	96	62.736	Mandrillus_leucophaeus
ENSMALG00000012571	pop4	99	87.330	ENSMAMG00000011716	pop4	99	87.330	Mastacembelus_armatus
ENSMALG00000012571	pop4	100	78.733	ENSMZEG00005002360	pop4	100	78.733	Maylandia_zebra
ENSMALG00000012571	pop4	100	57.014	ENSMGAG00000005337	POP4	95	59.434	Meleagris_gallopavo
ENSMALG00000012571	pop4	94	62.802	ENSMAUG00000020110	Pop4	94	62.802	Mesocricetus_auratus
ENSMALG00000012571	pop4	95	60.000	ENSMICG00000035730	POP4	94	60.000	Microcebus_murinus
ENSMALG00000012571	pop4	99	82.192	ENSMMOG00000015321	pop4	99	80.822	Mola_mola
ENSMALG00000012571	pop4	95	63.810	ENSMODG00000029406	POP4	91	63.810	Monodelphis_domestica
ENSMALG00000012571	pop4	94	63.942	MGP_CAROLIEiJ_G0029600	Pop4	94	63.942	Mus_caroli
ENSMALG00000012571	pop4	94	63.462	ENSMUSG00000030423	Pop4	94	63.462	Mus_musculus
ENSMALG00000012571	pop4	94	62.802	MGP_SPRETEiJ_G0030699	Pop4	94	62.981	Mus_spretus
ENSMALG00000012571	pop4	99	52.055	ENSMPUG00000008063	-	99	51.818	Mustela_putorius_furo
ENSMALG00000012571	pop4	94	61.836	ENSMPUG00000008041	-	95	61.429	Mustela_putorius_furo
ENSMALG00000012571	pop4	96	46.948	ENSMLUG00000010774	POP4	96	46.948	Myotis_lucifugus
ENSMALG00000012571	pop4	57	68.000	ENSMEUG00000003636	-	100	68.000	Notamacropus_eugenii
ENSMALG00000012571	pop4	88	65.128	ENSOPRG00000004736	POP4	98	65.128	Ochotona_princeps
ENSMALG00000012571	pop4	94	61.836	ENSODEG00000013025	POP4	99	61.429	Octodon_degus
ENSMALG00000012571	pop4	99	79.452	ENSONIG00000003458	pop4	97	79.452	Oreochromis_niloticus
ENSMALG00000012571	pop4	92	64.039	ENSOCUG00000015974	POP4	92	64.039	Oryctolagus_cuniculus
ENSMALG00000012571	pop4	99	75.566	ENSORLG00000020317	pop4	99	74.661	Oryzias_latipes
ENSMALG00000012571	pop4	100	74.439	ENSORLG00015011624	pop4	100	73.543	Oryzias_latipes_hsok
ENSMALG00000012571	pop4	100	73.991	ENSOMEG00000002538	pop4	100	73.094	Oryzias_melastigma
ENSMALG00000012571	pop4	94	62.319	ENSOGAG00000011168	POP4	95	61.905	Otolemur_garnettii
ENSMALG00000012571	pop4	95	62.085	ENSOARG00000004041	POP4	95	62.085	Ovis_aries
ENSMALG00000012571	pop4	92	63.547	ENSPPAG00000040372	POP4	96	61.792	Pan_paniscus
ENSMALG00000012571	pop4	95	62.857	ENSPPRG00000010502	POP4	95	62.857	Panthera_pardus
ENSMALG00000012571	pop4	95	62.857	ENSPTIG00000016598	POP4	95	62.857	Panthera_tigris_altaica
ENSMALG00000012571	pop4	92	63.547	ENSPTRG00000010779	POP4	96	61.792	Pan_troglodytes
ENSMALG00000012571	pop4	96	62.736	ENSPANG00000008546	POP4	96	62.736	Papio_anubis
ENSMALG00000012571	pop4	91	67.980	ENSPKIG00000004468	pop4	89	67.647	Paramormyrops_kingsleyae
ENSMALG00000012571	pop4	99	60.092	ENSPSIG00000015690	POP4	100	62.376	Pelodiscus_sinensis
ENSMALG00000012571	pop4	90	66.176	ENSPMGG00000008608	pop4	98	67.157	Periophthalmus_magnuspinnatus
ENSMALG00000012571	pop4	94	62.802	ENSPEMG00000014034	-	95	62.621	Peromyscus_maniculatus_bairdii
ENSMALG00000012571	pop4	92	53.695	ENSPEMG00000019982	-	92	53.695	Peromyscus_maniculatus_bairdii
ENSMALG00000012571	pop4	66	64.828	ENSPMAG00000006265	pop4	73	64.828	Petromyzon_marinus
ENSMALG00000012571	pop4	99	61.187	ENSPCIG00000024738	POP4	95	61.187	Phascolarctos_cinereus
ENSMALG00000012571	pop4	100	72.523	ENSPFOG00000000925	pop4	100	72.072	Poecilia_formosa
ENSMALG00000012571	pop4	100	72.973	ENSPLAG00000003161	pop4	100	72.523	Poecilia_latipinna
ENSMALG00000012571	pop4	100	72.523	ENSPMEG00000002475	pop4	100	72.072	Poecilia_mexicana
ENSMALG00000012571	pop4	99	72.273	ENSPREG00000022403	pop4	93	72.273	Poecilia_reticulata
ENSMALG00000012571	pop4	92	64.039	ENSPPYG00000009805	POP4	96	62.264	Pongo_abelii
ENSMALG00000012571	pop4	99	58.257	ENSPCAG00000007737	POP4	99	58.257	Procavia_capensis
ENSMALG00000012571	pop4	95	61.429	ENSPCOG00000018055	POP4	95	61.429	Propithecus_coquereli
ENSMALG00000012571	pop4	100	59.276	ENSPVAG00000006069	POP4	100	59.276	Pteropus_vampyrus
ENSMALG00000012571	pop4	100	78.733	ENSPNYG00000020038	pop4	100	78.733	Pundamilia_nyererei
ENSMALG00000012571	pop4	99	64.840	ENSPNAG00000005591	pop4	99	64.840	Pygocentrus_nattereri
ENSMALG00000012571	pop4	94	63.462	ENSRNOG00000027646	Pop4	94	63.462	Rattus_norvegicus
ENSMALG00000012571	pop4	74	59.146	ENSRBIG00000044769	POP4	82	66.929	Rhinopithecus_bieti
ENSMALG00000012571	pop4	96	62.736	ENSRROG00000028903	POP4	96	62.736	Rhinopithecus_roxellana
ENSMALG00000012571	pop4	57	31.655	YBR257W	-	50	31.655	Saccharomyces_cerevisiae
ENSMALG00000012571	pop4	96	62.264	ENSSBOG00000032445	POP4	96	62.264	Saimiri_boliviensis_boliviensis
ENSMALG00000012571	pop4	99	61.009	ENSSHAG00000016888	POP4	99	61.009	Sarcophilus_harrisii
ENSMALG00000012571	pop4	98	64.516	ENSSFOG00015014556	pop4	97	64.516	Scleropages_formosus
ENSMALG00000012571	pop4	100	84.305	ENSSMAG00000016611	pop4	100	82.960	Scophthalmus_maximus
ENSMALG00000012571	pop4	100	84.375	ENSSDUG00000019865	pop4	90	84.375	Seriola_dumerili
ENSMALG00000012571	pop4	100	84.375	ENSSLDG00000001763	pop4	100	84.375	Seriola_lalandi_dorsalis
ENSMALG00000012571	pop4	94	63.768	ENSSARG00000004748	POP4	95	63.768	Sorex_araneus
ENSMALG00000012571	pop4	100	85.268	ENSSPAG00000014364	pop4	100	84.821	Stegastes_partitus
ENSMALG00000012571	pop4	95	62.381	ENSSSCG00000002854	POP4	95	62.381	Sus_scrofa
ENSMALG00000012571	pop4	90	61.809	ENSTGUG00000008953	POP4	99	61.809	Taeniopygia_guttata
ENSMALG00000012571	pop4	91	76.355	ENSTNIG00000006401	pop4	100	76.355	Tetraodon_nigroviridis
ENSMALG00000012571	pop4	100	62.613	ENSTBEG00000002194	POP4	100	62.613	Tupaia_belangeri
ENSMALG00000012571	pop4	96	61.321	ENSTTRG00000005882	POP4	96	61.321	Tursiops_truncatus
ENSMALG00000012571	pop4	99	59.174	ENSUAMG00000003049	-	95	60.952	Ursus_americanus
ENSMALG00000012571	pop4	99	59.174	ENSUMAG00000007522	-	95	60.952	Ursus_maritimus
ENSMALG00000012571	pop4	94	60.870	ENSVVUG00000016876	-	72	60.870	Vulpes_vulpes
ENSMALG00000012571	pop4	96	59.906	ENSXETG00000017598	pop4	96	58.019	Xenopus_tropicalis
ENSMALG00000012571	pop4	99	72.072	ENSXCOG00000017695	pop4	93	71.622	Xiphophorus_couchianus
ENSMALG00000012571	pop4	99	72.072	ENSXMAG00000013862	pop4	93	71.622	Xiphophorus_maculatus