EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000012581 (Gene tree)
Gene ID: 109969051
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop-interacting RNA-binding protein%2C mitochondrial-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 7750 bases
Position: chrKV884857.1:1468964-1476713
Accession: 109969051
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000018028	RRM_1	PF00076.22	3.6e-14	1	1
ENSMALP00000018037	RRM_1	PF00076.22	3.6e-14	1	1
ENSMALP00000018049	RRM_1	PF00076.22	3.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000018377	-	1550	-	ENSMALP00000018028	98 (aa)	XP_020471362	UPI0009B49C99
ENSMALT00000018398	-	297	XM_020615705	ENSMALP00000018049	98 (aa)	XP_020471361	UPI0009B49C99
ENSMALT00000018386	-	1550	-	ENSMALP00000018037	98 (aa)	XP_020471362	UPI0009B49C99

Gene Model

Click here to download ENSMALG00000012581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000012581's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000012581	slirp	88	30.488	ENSMALG00000016024	hnrnpd	50	30.488
ENSMALG00000012581	slirp	85	31.507	ENSMALG00000010467	-	59	31.507
ENSMALG00000012581	slirp	79	31.579	ENSMALG00000008886	-	74	31.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000012581	slirp	77	57.333	ENSG00000119705	SLIRP	93	57.746	Homo_sapiens
ENSMALG00000012581	slirp	100	73.000	ENSAPOG00000001298	slirp	100	73.000	Acanthochromis_polyacanthus
ENSMALG00000012581	slirp	71	54.286	ENSAMEG00000003975	SLIRP	77	54.286	Ailuropoda_melanoleuca
ENSMALG00000012581	slirp	100	76.238	ENSACIG00000023083	slirp	100	76.238	Amphilophus_citrinellus
ENSMALG00000012581	slirp	97	75.258	ENSAOCG00000006342	slirp	98	75.258	Amphiprion_ocellaris
ENSMALG00000012581	slirp	97	75.258	ENSAPEG00000015917	slirp	98	75.258	Amphiprion_percula
ENSMALG00000012581	slirp	97	73.684	ENSAPEG00000015719	-	97	73.684	Amphiprion_percula
ENSMALG00000012581	slirp	96	73.404	ENSATEG00000013525	slirp	94	73.404	Anabas_testudineus
ENSMALG00000012581	slirp	98	55.102	ENSAMXG00000018693	slirp	98	55.102	Astyanax_mexicanus
ENSMALG00000012581	slirp	76	58.108	ENSCJAG00000016946	SLIRP	72	56.716	Callithrix_jacchus
ENSMALG00000012581	slirp	90	53.333	ENSCAFG00020015876	-	81	53.333	Canis_lupus_dingo
ENSMALG00000012581	slirp	77	56.000	ENSCCAG00000030130	SLIRP	69	56.000	Cebus_capucinus
ENSMALG00000012581	slirp	99	47.000	ENSCATG00000036327	SLIRP	92	47.000	Cercocebus_atys
ENSMALG00000012581	slirp	89	51.724	ENSCSAG00000011736	SLIRP	92	48.000	Chlorocebus_sabaeus
ENSMALG00000012581	slirp	83	61.728	ENSCPBG00000026327	SLIRP	82	61.728	Chrysemys_picta_bellii
ENSMALG00000012581	slirp	68	62.687	ENSCANG00000032892	SLIRP	68	62.687	Colobus_angolensis_palliatus
ENSMALG00000012581	slirp	90	45.556	ENSCGRG00001024068	Slirp	81	45.556	Cricetulus_griseus_chok1gshd
ENSMALG00000012581	slirp	90	45.556	ENSCGRG00000017440	Slirp	81	45.556	Cricetulus_griseus_crigri
ENSMALG00000012581	slirp	85	57.831	ENSCSEG00000015766	slirp	85	57.831	Cynoglossus_semilaevis
ENSMALG00000012581	slirp	92	73.333	ENSCVAG00000012504	slirp	86	73.333	Cyprinodon_variegatus
ENSMALG00000012581	slirp	89	74.713	ENSDARG00000097753	slirp	87	74.444	Danio_rerio
ENSMALG00000012581	slirp	87	48.837	ENSDNOG00000007721	SLIRP	79	48.276	Dasypus_novemcinctus
ENSMALG00000012581	slirp	88	48.864	ENSDORG00000012379	Slirp	79	48.864	Dipodomys_ordii
ENSMALG00000012581	slirp	90	50.000	ENSETEG00000010345	SLIRP	81	50.000	Echinops_telfairi
ENSMALG00000012581	slirp	89	49.438	ENSEASG00005020193	SLIRP	80	49.438	Equus_asinus_asinus
ENSMALG00000012581	slirp	99	45.918	ENSEEUG00000007257	SLIRP	97	45.918	Erinaceus_europaeus
ENSMALG00000012581	slirp	98	69.792	ENSELUG00000016800	slirp	95	69.792	Esox_lucius
ENSMALG00000012581	slirp	69	54.412	ENSFCAG00000036326	SLIRP	69	54.412	Felis_catus
ENSMALG00000012581	slirp	80	56.410	ENSFALG00000012583	SLIRP	80	55.294	Ficedula_albicollis
ENSMALG00000012581	slirp	89	47.126	ENSFDAG00000008347	SLIRP	77	47.126	Fukomys_damarensis
ENSMALG00000012581	slirp	76	72.973	ENSFHEG00000004709	slirp	80	72.973	Fundulus_heteroclitus
ENSMALG00000012581	slirp	99	63.918	ENSGMOG00000016948	slirp	93	63.918	Gadus_morhua
ENSMALG00000012581	slirp	80	61.538	ENSGALG00000031238	SLIRP	78	63.514	Gallus_gallus
ENSMALG00000012581	slirp	100	74.490	ENSGAFG00000010998	slirp	98	74.490	Gambusia_affinis
ENSMALG00000012581	slirp	84	76.829	ENSGACG00000020137	slirp	95	76.829	Gasterosteus_aculeatus
ENSMALG00000012581	slirp	84	63.415	ENSGAGG00000009953	SLIRP	57	63.415	Gopherus_agassizii
ENSMALG00000012581	slirp	77	57.333	ENSGGOG00000011059	-	73	58.824	Gorilla_gorilla
ENSMALG00000012581	slirp	89	48.315	ENSHGLG00000018491	SLIRP	80	48.315	Heterocephalus_glaber_female
ENSMALG00000012581	slirp	89	48.315	ENSHGLG00100014153	SLIRP	80	48.315	Heterocephalus_glaber_male
ENSMALG00000012581	slirp	96	72.340	ENSHCOG00000006795	slirp	95	72.340	Hippocampus_comes
ENSMALG00000012581	slirp	100	65.306	ENSIPUG00000010214	SLIRP	98	65.306	Ictalurus_punctatus
ENSMALG00000012581	slirp	90	48.889	ENSSTOG00000034316	SLIRP	81	48.889	Ictidomys_tridecemlineatus
ENSMALG00000012581	slirp	91	68.539	ENSKMAG00000002038	slirp	86	68.539	Kryptolebias_marmoratus
ENSMALG00000012581	slirp	100	66.000	ENSLBEG00000007564	slirp	100	66.000	Labrus_bergylta
ENSMALG00000012581	slirp	98	67.708	ENSLACG00000013434	SLIRP	92	67.708	Latimeria_chalumnae
ENSMALG00000012581	slirp	89	51.724	ENSMFAG00000042960	SLIRP	92	49.000	Macaca_fascicularis
ENSMALG00000012581	slirp	86	52.381	ENSMMUG00000029256	SLIRP	93	46.465	Macaca_mulatta
ENSMALG00000012581	slirp	89	51.724	ENSMNEG00000028921	SLIRP	92	49.000	Macaca_nemestrina
ENSMALG00000012581	slirp	79	53.750	ENSMLEG00000043644	SLIRP	82	53.750	Mandrillus_leucophaeus
ENSMALG00000012581	slirp	97	77.320	ENSMZEG00005004617	slirp	98	77.320	Maylandia_zebra
ENSMALG00000012581	slirp	90	48.889	ENSMAUG00000003857	Slirp	81	48.889	Mesocricetus_auratus
ENSMALG00000012581	slirp	99	40.741	ENSMICG00000012080	SLIRP	97	40.741	Microcebus_murinus
ENSMALG00000012581	slirp	77	52.000	ENSMOCG00000016019	Slirp	69	52.857	Microtus_ochrogaster
ENSMALG00000012581	slirp	100	76.000	ENSMMOG00000018268	slirp	100	76.000	Mola_mola
ENSMALG00000012581	slirp	71	51.429	ENSMODG00000005207	-	99	51.429	Monodelphis_domestica
ENSMALG00000012581	slirp	77	53.333	MGP_CAROLIEiJ_G0017995	Slirp	69	53.333	Mus_caroli
ENSMALG00000012581	slirp	77	53.333	ENSMUSG00000021040	Slirp	71	52.857	Mus_musculus
ENSMALG00000012581	slirp	77	53.333	MGP_SPRETEiJ_G0018840	Slirp	67	53.333	Mus_spretus
ENSMALG00000012581	slirp	77	52.000	ENSMLUG00000029544	-	67	52.000	Myotis_lucifugus
ENSMALG00000012581	slirp	74	53.425	ENSMLUG00000024998	-	66	53.425	Myotis_lucifugus
ENSMALG00000012581	slirp	88	48.864	ENSNGAG00000016363	Slirp	85	48.864	Nannospalax_galili
ENSMALG00000012581	slirp	77	53.333	ENSNLEG00000032459	-	73	52.941	Nomascus_leucogenys
ENSMALG00000012581	slirp	77	53.333	ENSNLEG00000027238	-	80	54.286	Nomascus_leucogenys
ENSMALG00000012581	slirp	76	55.405	ENSODEG00000012580	SLIRP	76	55.714	Octodon_degus
ENSMALG00000012581	slirp	97	78.351	ENSONIG00000011692	slirp	98	78.351	Oreochromis_niloticus
ENSMALG00000012581	slirp	78	55.263	ENSOANG00000022366	SLIRP	68	55.263	Ornithorhynchus_anatinus
ENSMALG00000012581	slirp	100	72.000	ENSORLG00000010761	slirp	78	72.000	Oryzias_latipes
ENSMALG00000012581	slirp	100	71.000	ENSORLG00020022188	slirp	100	71.000	Oryzias_latipes_hni
ENSMALG00000012581	slirp	99	71.717	ENSORLG00015020171	slirp	98	71.717	Oryzias_latipes_hsok
ENSMALG00000012581	slirp	100	75.000	ENSOMEG00000019321	slirp	100	75.000	Oryzias_melastigma
ENSMALG00000012581	slirp	77	57.333	ENSPPAG00000040710	-	73	58.824	Pan_paniscus
ENSMALG00000012581	slirp	69	54.412	ENSPPRG00000014350	SLIRP	69	54.412	Panthera_pardus
ENSMALG00000012581	slirp	69	54.412	ENSPTIG00000014196	SLIRP	69	54.412	Panthera_tigris_altaica
ENSMALG00000012581	slirp	77	57.333	ENSPTRG00000030691	SLIRP	73	58.824	Pan_troglodytes
ENSMALG00000012581	slirp	99	49.000	ENSPANG00000026323	SLIRP	92	49.000	Papio_anubis
ENSMALG00000012581	slirp	67	69.697	ENSPKIG00000008831	slirp	65	69.697	Paramormyrops_kingsleyae
ENSMALG00000012581	slirp	82	75.000	ENSPMGG00000010541	slirp	92	75.000	Periophthalmus_magnuspinnatus
ENSMALG00000012581	slirp	87	43.529	ENSPEMG00000013234	Slirp	69	50.000	Peromyscus_maniculatus_bairdii
ENSMALG00000012581	slirp	81	50.633	ENSPMAG00000009355	slirp	88	50.633	Petromyzon_marinus
ENSMALG00000012581	slirp	79	46.753	ENSPCIG00000026842	-	83	46.753	Phascolarctos_cinereus
ENSMALG00000012581	slirp	100	74.490	ENSPFOG00000006758	slirp	98	74.490	Poecilia_formosa
ENSMALG00000012581	slirp	100	75.510	ENSPLAG00000011140	slirp	98	75.510	Poecilia_latipinna
ENSMALG00000012581	slirp	100	74.490	ENSPMEG00000019535	slirp	98	74.490	Poecilia_mexicana
ENSMALG00000012581	slirp	100	74.490	ENSPREG00000011673	slirp	98	74.490	Poecilia_reticulata
ENSMALG00000012581	slirp	89	50.575	ENSPPYG00000006030	SLIRP	81	50.000	Pongo_abelii
ENSMALG00000012581	slirp	90	43.333	ENSPCOG00000015159	SLIRP	71	51.316	Propithecus_coquereli
ENSMALG00000012581	slirp	100	66.327	ENSPNAG00000008633	slirp	99	66.327	Pygocentrus_nattereri
ENSMALG00000012581	slirp	89	57.471	ENSRBIG00000032222	-	92	53.000	Rhinopithecus_bieti
ENSMALG00000012581	slirp	76	56.757	ENSRBIG00000035817	-	81	51.724	Rhinopithecus_bieti
ENSMALG00000012581	slirp	68	59.701	ENSRBIG00000032998	-	62	59.701	Rhinopithecus_bieti
ENSMALG00000012581	slirp	66	61.538	ENSRBIG00000031396	-	65	61.538	Rhinopithecus_bieti
ENSMALG00000012581	slirp	89	57.471	ENSRROG00000036656	-	80	57.471	Rhinopithecus_roxellana
ENSMALG00000012581	slirp	72	61.972	ENSRROG00000041312	-	70	61.972	Rhinopithecus_roxellana
ENSMALG00000012581	slirp	68	61.194	ENSRROG00000017133	-	70	61.194	Rhinopithecus_roxellana
ENSMALG00000012581	slirp	66	63.077	ENSRROG00000035604	-	65	63.077	Rhinopithecus_roxellana
ENSMALG00000012581	slirp	69	57.353	ENSSBOG00000020014	SLIRP	73	57.353	Saimiri_boliviensis_boliviensis
ENSMALG00000012581	slirp	87	62.353	ENSSFOG00015011165	slirp	86	62.353	Scleropages_formosus
ENSMALG00000012581	slirp	88	54.651	ENSSMAG00000012930	slirp	84	54.651	Scophthalmus_maximus
ENSMALG00000012581	slirp	100	76.000	ENSSDUG00000021883	slirp	66	76.000	Seriola_dumerili
ENSMALG00000012581	slirp	100	76.000	ENSSLDG00000023136	slirp	91	76.000	Seriola_lalandi_dorsalis
ENSMALG00000012581	slirp	84	72.093	ENSSPUG00000009346	SLIRP	88	72.093	Sphenodon_punctatus
ENSMALG00000012581	slirp	100	66.000	ENSSPAG00000013477	slirp	100	66.000	Stegastes_partitus
ENSMALG00000012581	slirp	90	47.778	ENSSSCG00000028167	SLIRP	81	47.778	Sus_scrofa
ENSMALG00000012581	slirp	80	57.692	ENSTGUG00000012337	SLIRP	80	55.294	Taeniopygia_guttata
ENSMALG00000012581	slirp	96	71.579	ENSTRUG00000020127	slirp	94	71.579	Takifugu_rubripes
ENSMALG00000012581	slirp	90	51.136	ENSUAMG00000022445	SLIRP	79	51.136	Ursus_americanus
ENSMALG00000012581	slirp	90	52.222	ENSUMAG00000007166	SLIRP	81	52.222	Ursus_maritimus
ENSMALG00000012581	slirp	90	47.727	ENSVPAG00000001781	SLIRP	81	47.727	Vicugna_pacos
ENSMALG00000012581	slirp	90	52.222	ENSVVUG00000004436	SLIRP	81	52.222	Vulpes_vulpes
ENSMALG00000012581	slirp	83	71.605	ENSXETG00000030343	SLIRP	91	71.605	Xenopus_tropicalis
ENSMALG00000012581	slirp	100	73.469	ENSXCOG00000009422	slirp	98	73.469	Xiphophorus_couchianus
ENSMALG00000012581	slirp	100	74.490	ENSXMAG00000015655	slirp	98	74.490	Xiphophorus_maculatus