EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000012621 (Gene tree)
Gene ID: 109963844
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 15513 bases
Position: chrKV884769.1:162835-178347
Accession: 109963844
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000018089	POP1	PF06978.11	1.9e-36	1	2
ENSMALP00000018089	POP1	PF06978.11	1.9e-36	2	2
ENSMALP00000018089	POPLD	PF08170.12	1.9e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000018438	POP1-201	6792	XM_020606727	ENSMALP00000018089	973 (aa)	XP_020462383	UPI0009B33F32

Gene Model

Click here to download ENSMALG00000012621's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03008	Ribosome biogenesis in eukaryotes	KEGG
malb03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000012621's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000012621	POP1	100	47.543	ENSG00000104356	POP1	93	51.962	Homo_sapiens
ENSMALG00000012621	POP1	100	77.834	ENSAPOG00000008198	pop1	100	77.834	Acanthochromis_polyacanthus
ENSMALG00000012621	POP1	100	47.198	ENSAMEG00000000556	POP1	100	46.964	Ailuropoda_melanoleuca
ENSMALG00000012621	POP1	100	71.414	ENSACIG00000004169	POP1	100	70.850	Amphilophus_citrinellus
ENSMALG00000012621	POP1	100	77.126	ENSAOCG00000010991	pop1	100	77.530	Amphiprion_ocellaris
ENSMALG00000012621	POP1	100	70.464	ENSAPEG00000007607	pop1	100	70.867	Amphiprion_percula
ENSMALG00000012621	POP1	100	79.879	ENSATEG00000024814	POP1	100	79.678	Anabas_testudineus
ENSMALG00000012621	POP1	93	49.582	ENSAPLG00000014418	POP1	99	49.165	Anas_platyrhynchos
ENSMALG00000012621	POP1	100	46.176	ENSACAG00000016083	POP1	100	45.798	Anolis_carolinensis
ENSMALG00000012621	POP1	87	53.963	ENSANAG00000026360	POP1	90	56.705	Aotus_nancymaae
ENSMALG00000012621	POP1	100	75.506	ENSACLG00000010951	pop1	100	75.709	Astatotilapia_calliptera
ENSMALG00000012621	POP1	100	56.947	ENSAMXG00000014483	POP1	100	56.751	Astyanax_mexicanus
ENSMALG00000012621	POP1	100	48.418	ENSBTAG00000012596	POP1	100	48.418	Bos_taurus
ENSMALG00000012621	POP1	60	31.349	WBGene00015486	C05D11.9	83	33.333	Caenorhabditis_elegans
ENSMALG00000012621	POP1	100	47.931	ENSCJAG00000015567	POP1	100	47.303	Callithrix_jacchus
ENSMALG00000012621	POP1	100	48.880	ENSCAFG00000000469	POP1	100	48.880	Canis_familiaris
ENSMALG00000012621	POP1	100	47.673	ENSCAFG00020026765	POP1	100	47.578	Canis_lupus_dingo
ENSMALG00000012621	POP1	100	48.038	ENSCHIG00000017066	POP1	100	47.847	Capra_hircus
ENSMALG00000012621	POP1	100	47.768	ENSTSYG00000003097	POP1	100	47.673	Carlito_syrichta
ENSMALG00000012621	POP1	100	46.367	ENSCAPG00000007251	POP1	100	46.360	Cavia_aperea
ENSMALG00000012621	POP1	100	47.313	ENSCPOG00000002901	POP1	100	47.308	Cavia_porcellus
ENSMALG00000012621	POP1	100	48.596	ENSCCAG00000018939	POP1	100	47.725	Cebus_capucinus
ENSMALG00000012621	POP1	100	46.686	ENSCATG00000040916	POP1	93	51.018	Cercocebus_atys
ENSMALG00000012621	POP1	100	46.540	ENSCLAG00000007208	POP1	90	50.606	Chinchilla_lanigera
ENSMALG00000012621	POP1	91	49.206	ENSCSAG00000012340	POP1	90	55.772	Chlorocebus_sabaeus
ENSMALG00000012621	POP1	93	46.868	ENSCHOG00000011432	POP1	88	52.100	Choloepus_hoffmanni
ENSMALG00000012621	POP1	100	50.048	ENSCPBG00000006373	POP1	100	50.193	Chrysemys_picta_bellii
ENSMALG00000012621	POP1	80	33.333	ENSCING00000008323	-	89	35.686	Ciona_intestinalis
ENSMALG00000012621	POP1	100	47.249	ENSCANG00000001647	POP1	93	51.425	Colobus_angolensis_palliatus
ENSMALG00000012621	POP1	100	46.815	ENSCGRG00001017308	Pop1	100	46.494	Cricetulus_griseus_chok1gshd
ENSMALG00000012621	POP1	100	44.291	ENSCGRG00000010824	Pop1	100	44.149	Cricetulus_griseus_crigri
ENSMALG00000012621	POP1	100	72.452	ENSCSEG00000008737	POP1	100	72.452	Cynoglossus_semilaevis
ENSMALG00000012621	POP1	100	68.769	ENSCVAG00000022248	pop1	100	69.379	Cyprinodon_variegatus
ENSMALG00000012621	POP1	51	54.183	ENSDARG00000102087	pop1	98	54.183	Danio_rerio
ENSMALG00000012621	POP1	100	45.116	ENSDNOG00000019974	POP1	100	45.209	Dasypus_novemcinctus
ENSMALG00000012621	POP1	100	42.748	ENSDORG00000015384	Pop1	100	42.462	Dipodomys_ordii
ENSMALG00000012621	POP1	88	46.435	ENSETEG00000007839	POP1	88	46.435	Echinops_telfairi
ENSMALG00000012621	POP1	51	44.379	ENSEBUG00000009897	pop1	96	44.379	Eptatretus_burgeri
ENSMALG00000012621	POP1	100	48.184	ENSEASG00005003189	POP1	91	52.335	Equus_asinus_asinus
ENSMALG00000012621	POP1	100	48.184	ENSECAG00000024236	POP1	93	52.335	Equus_caballus
ENSMALG00000012621	POP1	52	72.727	ENSEEUG00000003050	-	54	72.727	Erinaceus_europaeus
ENSMALG00000012621	POP1	100	62.690	ENSELUG00000003526	pop1	100	62.828	Esox_lucius
ENSMALG00000012621	POP1	100	48.233	ENSFCAG00000002168	POP1	100	47.660	Felis_catus
ENSMALG00000012621	POP1	100	48.252	ENSFALG00000005711	POP1	100	48.792	Ficedula_albicollis
ENSMALG00000012621	POP1	100	46.402	ENSFDAG00000017068	POP1	93	50.683	Fukomys_damarensis
ENSMALG00000012621	POP1	100	70.314	ENSFHEG00000019518	pop1	100	70.415	Fundulus_heteroclitus
ENSMALG00000012621	POP1	100	61.616	ENSGMOG00000000659	POP1	100	61.756	Gadus_morhua
ENSMALG00000012621	POP1	100	68.794	ENSGAFG00000019770	POP1	100	68.794	Gambusia_affinis
ENSMALG00000012621	POP1	100	67.431	ENSGACG00000003499	pop1	100	67.686	Gasterosteus_aculeatus
ENSMALG00000012621	POP1	100	48.986	ENSGAGG00000011737	POP1	98	50.000	Gopherus_agassizii
ENSMALG00000012621	POP1	100	47.358	ENSGGOG00000003176	POP1	93	51.822	Gorilla_gorilla
ENSMALG00000012621	POP1	100	75.709	ENSHBUG00000021583	pop1	100	75.709	Haplochromis_burtoni
ENSMALG00000012621	POP1	100	46.622	ENSHGLG00000006029	POP1	92	50.964	Heterocephalus_glaber_female
ENSMALG00000012621	POP1	100	46.622	ENSHGLG00100016879	POP1	92	50.964	Heterocephalus_glaber_male
ENSMALG00000012621	POP1	100	64.447	ENSHCOG00000013888	pop1	100	63.824	Hippocampus_comes
ENSMALG00000012621	POP1	100	55.350	ENSIPUG00000018336	pop1	100	55.156	Ictalurus_punctatus
ENSMALG00000012621	POP1	100	47.048	ENSSTOG00000011455	POP1	90	51.507	Ictidomys_tridecemlineatus
ENSMALG00000012621	POP1	100	47.317	ENSJJAG00000013325	Pop1	100	47.024	Jaculus_jaculus
ENSMALG00000012621	POP1	100	72.273	ENSKMAG00000001346	POP1	100	72.912	Kryptolebias_marmoratus
ENSMALG00000012621	POP1	100	67.683	ENSLBEG00000024457	POP1	100	67.683	Labrus_bergylta
ENSMALG00000012621	POP1	94	50.964	ENSLACG00000012498	POP1	99	51.376	Latimeria_chalumnae
ENSMALG00000012621	POP1	100	55.426	ENSLOCG00000009817	POP1	100	56.008	Lepisosteus_oculatus
ENSMALG00000012621	POP1	100	48.664	ENSLAFG00000010770	POP1	100	48.764	Loxodonta_africana
ENSMALG00000012621	POP1	100	47.064	ENSMFAG00000000347	POP1	93	51.560	Macaca_fascicularis
ENSMALG00000012621	POP1	100	47.064	ENSMNEG00000036870	POP1	93	51.560	Macaca_nemestrina
ENSMALG00000012621	POP1	100	47.159	ENSMLEG00000034986	POP1	93	51.560	Mandrillus_leucophaeus
ENSMALG00000012621	POP1	100	80.707	ENSMAMG00000004040	pop1	100	80.606	Mastacembelus_armatus
ENSMALG00000012621	POP1	100	75.607	ENSMZEG00005025448	pop1	100	75.607	Maylandia_zebra
ENSMALG00000012621	POP1	100	47.777	ENSMGAG00000012167	POP1	100	48.068	Meleagris_gallopavo
ENSMALG00000012621	POP1	100	47.070	ENSMAUG00000017537	Pop1	100	46.827	Mesocricetus_auratus
ENSMALG00000012621	POP1	100	47.710	ENSMICG00000004361	POP1	100	47.996	Microcebus_murinus
ENSMALG00000012621	POP1	100	46.821	ENSMOCG00000006356	Pop1	100	46.986	Microtus_ochrogaster
ENSMALG00000012621	POP1	100	66.328	ENSMMOG00000018242	pop1	100	66.328	Mola_mola
ENSMALG00000012621	POP1	100	47.958	ENSMODG00000006561	POP1	100	48.243	Monodelphis_domestica
ENSMALG00000012621	POP1	100	45.881	MGP_CAROLIEiJ_G0019726	Pop1	100	45.829	Mus_caroli
ENSMALG00000012621	POP1	100	46.256	ENSMUSG00000022325	Pop1	100	46.059	Mus_musculus
ENSMALG00000012621	POP1	100	46.388	MGP_PahariEiJ_G0019735	Pop1	100	46.242	Mus_pahari
ENSMALG00000012621	POP1	100	46.088	MGP_SPRETEiJ_G0020622	Pop1	100	45.941	Mus_spretus
ENSMALG00000012621	POP1	100	47.547	ENSMPUG00000015250	POP1	100	47.254	Mustela_putorius_furo
ENSMALG00000012621	POP1	100	45.933	ENSMLUG00000010204	POP1	100	45.646	Myotis_lucifugus
ENSMALG00000012621	POP1	100	47.343	ENSNGAG00000001582	Pop1	92	51.907	Nannospalax_galili
ENSMALG00000012621	POP1	100	70.336	ENSNBRG00000002356	pop1	100	69.725	Neolamprologus_brichardi
ENSMALG00000012621	POP1	100	47.343	ENSNLEG00000002541	POP1	92	51.989	Nomascus_leucogenys
ENSMALG00000012621	POP1	87	57.958	ENSMEUG00000003118	POP1	90	57.958	Notamacropus_eugenii
ENSMALG00000012621	POP1	100	47.464	ENSOPRG00000007667	POP1	100	47.464	Ochotona_princeps
ENSMALG00000012621	POP1	100	45.897	ENSODEG00000003984	POP1	100	46.323	Octodon_degus
ENSMALG00000012621	POP1	100	76.215	ENSONIG00000016445	pop1	100	76.215	Oreochromis_niloticus
ENSMALG00000012621	POP1	60	45.545	ENSOANG00000001278	-	94	45.545	Ornithorhynchus_anatinus
ENSMALG00000012621	POP1	100	46.503	ENSOCUG00000017400	POP1	100	46.321	Oryctolagus_cuniculus
ENSMALG00000012621	POP1	100	70.719	ENSORLG00000002839	pop1	100	70.517	Oryzias_latipes
ENSMALG00000012621	POP1	100	65.020	ENSORLG00020022450	POP1	100	64.462	Oryzias_latipes_hni
ENSMALG00000012621	POP1	100	71.125	ENSORLG00015012746	POP1	100	70.922	Oryzias_latipes_hsok
ENSMALG00000012621	POP1	100	69.184	ENSOMEG00000006915	pop1	99	68.948	Oryzias_melastigma
ENSMALG00000012621	POP1	100	47.656	ENSOGAG00000001466	POP1	100	48.130	Otolemur_garnettii
ENSMALG00000012621	POP1	100	47.637	ENSPPAG00000018410	POP1	93	52.097	Pan_paniscus
ENSMALG00000012621	POP1	100	47.950	ENSPPRG00000005002	POP1	100	47.474	Panthera_pardus
ENSMALG00000012621	POP1	100	47.905	ENSPTIG00000016527	POP1	100	47.714	Panthera_tigris_altaica
ENSMALG00000012621	POP1	100	47.727	ENSPTRG00000020458	POP1	93	52.239	Pan_troglodytes
ENSMALG00000012621	POP1	100	47.159	ENSPANG00000009704	POP1	93	51.495	Papio_anubis
ENSMALG00000012621	POP1	100	57.415	ENSPKIG00000016325	POP1	100	57.515	Paramormyrops_kingsleyae
ENSMALG00000012621	POP1	100	49.522	ENSPSIG00000012343	POP1	100	49.618	Pelodiscus_sinensis
ENSMALG00000012621	POP1	100	60.463	ENSPMGG00000022253	POP1	100	61.106	Periophthalmus_magnuspinnatus
ENSMALG00000012621	POP1	99	46.176	ENSPEMG00000023633	Pop1	100	45.892	Peromyscus_maniculatus_bairdii
ENSMALG00000012621	POP1	91	43.750	ENSPMAG00000003209	POP1	99	44.080	Petromyzon_marinus
ENSMALG00000012621	POP1	100	47.438	ENSPCIG00000012216	POP1	100	47.193	Phascolarctos_cinereus
ENSMALG00000012621	POP1	100	69.246	ENSPFOG00000012490	POP1	100	69.285	Poecilia_formosa
ENSMALG00000012621	POP1	100	68.844	ENSPLAG00000004646	POP1	100	68.882	Poecilia_latipinna
ENSMALG00000012621	POP1	100	69.045	ENSPMEG00000019592	POP1	100	68.844	Poecilia_mexicana
ENSMALG00000012621	POP1	100	68.712	ENSPREG00000020951	POP1	100	68.750	Poecilia_reticulata
ENSMALG00000012621	POP1	100	47.164	ENSPPYG00000018777	POP1	100	47.538	Pongo_abelii
ENSMALG00000012621	POP1	100	45.429	ENSPCAG00000016662	POP1	100	45.238	Procavia_capensis
ENSMALG00000012621	POP1	100	47.172	ENSPCOG00000019420	POP1	100	47.278	Propithecus_coquereli
ENSMALG00000012621	POP1	100	47.177	ENSPVAG00000014468	POP1	100	47.182	Pteropus_vampyrus
ENSMALG00000012621	POP1	100	71.414	ENSPNYG00000004476	pop1	100	71.209	Pundamilia_nyererei
ENSMALG00000012621	POP1	100	57.505	ENSPNAG00000000265	pop1	100	57.505	Pygocentrus_nattereri
ENSMALG00000012621	POP1	100	46.146	ENSRNOG00000005243	Pop1	100	46.339	Rattus_norvegicus
ENSMALG00000012621	POP1	100	47.159	ENSRBIG00000007996	POP1	100	46.679	Rhinopithecus_bieti
ENSMALG00000012621	POP1	100	47.159	ENSRROG00000012334	POP1	93	51.482	Rhinopithecus_roxellana
ENSMALG00000012621	POP1	93	49.948	ENSSBOG00000020830	POP1	93	49.739	Saimiri_boliviensis_boliviensis
ENSMALG00000012621	POP1	100	47.429	ENSSHAG00000000296	POP1	100	47.378	Sarcophilus_harrisii
ENSMALG00000012621	POP1	100	60.181	ENSSFOG00015007429	pop1	99	59.980	Scleropages_formosus
ENSMALG00000012621	POP1	100	72.533	ENSSMAG00000010467	POP1	100	72.635	Scophthalmus_maximus
ENSMALG00000012621	POP1	100	81.130	ENSSDUG00000007817	POP1	100	81.130	Seriola_dumerili
ENSMALG00000012621	POP1	100	81.717	ENSSLDG00000012565	POP1	100	81.717	Seriola_lalandi_dorsalis
ENSMALG00000012621	POP1	100	46.280	ENSSPUG00000003550	-	100	46.570	Sphenodon_punctatus
ENSMALG00000012621	POP1	100	71.615	ENSSPAG00000014955	pop1	100	71.414	Stegastes_partitus
ENSMALG00000012621	POP1	100	48.112	ENSSSCG00000006078	POP1	100	48.015	Sus_scrofa
ENSMALG00000012621	POP1	93	45.652	ENSTGUG00000012011	-	99	45.342	Taeniopygia_guttata
ENSMALG00000012621	POP1	100	67.846	ENSTRUG00000010856	pop1	100	67.778	Takifugu_rubripes
ENSMALG00000012621	POP1	94	68.731	ENSTNIG00000013297	pop1	99	68.524	Tetraodon_nigroviridis
ENSMALG00000012621	POP1	93	46.050	ENSTBEG00000014214	POP1	89	51.473	Tupaia_belangeri
ENSMALG00000012621	POP1	100	46.264	ENSTTRG00000016071	POP1	100	45.913	Tursiops_truncatus
ENSMALG00000012621	POP1	99	48.867	ENSUAMG00000017309	POP1	100	48.670	Ursus_americanus
ENSMALG00000012621	POP1	100	47.164	ENSUMAG00000016952	POP1	100	49.813	Ursus_maritimus
ENSMALG00000012621	POP1	86	50.709	ENSVPAG00000008278	POP1	82	50.709	Vicugna_pacos
ENSMALG00000012621	POP1	100	47.859	ENSVVUG00000010994	POP1	100	48.049	Vulpes_vulpes
ENSMALG00000012621	POP1	100	60.521	ENSXCOG00000017043	POP1	100	60.521	Xiphophorus_couchianus
ENSMALG00000012621	POP1	100	68.379	ENSXMAG00000002472	POP1	100	68.379	Xiphophorus_maculatus