EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000012956 (Gene tree)
Gene ID: 109953359
Gene Symbol: srsf2a
Alias: -
Full Name: serine/arginine-rich splicing factor 2-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 2283 bases
Position: chrKV885327.1:6603-8885
Accession: 109953359
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000018573	RRM_1	PF00076.22	8.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000018934	-	817	XM_020588821	ENSMALP00000018573	230 (aa)	XP_020444477	UPI0009B362B2

Gene Model

Click here to download ENSMALG00000012956's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG
malb05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000012956's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000012956	srsf2a	55	82.031	ENSAPOG00000008073	srsf2b	53	86.207	Acanthochromis_polyacanthus
ENSMALG00000012956	srsf2a	100	94.397	ENSAPOG00000024396	srsf2a	50	99.123	Acanthochromis_polyacanthus
ENSMALG00000012956	srsf2a	80	68.108	ENSACIG00000018502	srsf2a	84	73.034	Amphilophus_citrinellus
ENSMALG00000012956	srsf2a	50	100.000	ENSAOCG00000021878	srsf2a	52	100.000	Amphiprion_ocellaris
ENSMALG00000012956	srsf2a	100	71.552	ENSAOCG00000022441	-	54	89.655	Amphiprion_ocellaris
ENSMALG00000012956	srsf2a	69	80.124	ENSAPEG00000006375	-	54	89.655	Amphiprion_percula
ENSMALG00000012956	srsf2a	50	100.000	ENSAPEG00000023494	srsf2a	52	100.000	Amphiprion_percula
ENSMALG00000012956	srsf2a	50	93.103	ENSACAG00000008553	-	52	93.103	Anolis_carolinensis
ENSMALG00000012956	srsf2a	50	98.246	ENSACLG00000027016	srsf2a	50	98.246	Astatotilapia_calliptera
ENSMALG00000012956	srsf2a	100	60.515	ENSCHOG00000014019	-	53	91.667	Choloepus_hoffmanni
ENSMALG00000012956	srsf2a	93	68.664	ENSDARG00000057484	srsf2a	100	97.458	Danio_rerio
ENSMALG00000012956	srsf2a	85	49.239	ENSDNOG00000033905	-	53	63.000	Dasypus_novemcinctus
ENSMALG00000012956	srsf2a	50	88.034	ENSFALG00000000869	-	50	91.743	Ficedula_albicollis
ENSMALG00000012956	srsf2a	90	68.599	ENSGMOG00000001599	srsf2a	59	89.655	Gadus_morhua
ENSMALG00000012956	srsf2a	50	93.103	ENSGALG00000017357	SRSF2	52	93.103	Gallus_gallus
ENSMALG00000012956	srsf2a	50	98.246	ENSHBUG00000013254	srsf2a	50	98.246	Haplochromis_burtoni
ENSMALG00000012956	srsf2a	50	93.860	ENSLOCG00000011252	srsf2a	53	93.860	Lepisosteus_oculatus
ENSMALG00000012956	srsf2a	50	98.246	ENSMZEG00005004205	srsf2a	50	98.246	Maylandia_zebra
ENSMALG00000012956	srsf2a	99	79.476	ENSMMOG00000020751	srsf2a	53	99.123	Mola_mola
ENSMALG00000012956	srsf2a	89	44.231	ENSMLUG00000026613	-	52	59.813	Myotis_lucifugus
ENSMALG00000012956	srsf2a	56	70.229	ENSOCUG00000021840	-	51	74.336	Oryctolagus_cuniculus
ENSMALG00000012956	srsf2a	50	92.982	ENSPKIG00000023128	-	50	92.982	Paramormyrops_kingsleyae
ENSMALG00000012956	srsf2a	57	77.273	ENSPMGG00000006860	-	60	96.000	Periophthalmus_magnuspinnatus
ENSMALG00000012956	srsf2a	50	98.246	ENSPNYG00000001148	srsf2a	50	98.246	Pundamilia_nyererei
ENSMALG00000012956	srsf2a	66	76.974	ENSSFOG00015003975	-	50	96.460	Scleropages_formosus
ENSMALG00000012956	srsf2a	100	93.966	ENSSDUG00000013865	srsf2a	100	93.966	Seriola_dumerili
ENSMALG00000012956	srsf2a	100	93.966	ENSSLDG00000017717	srsf2a	100	93.966	Seriola_lalandi_dorsalis
ENSMALG00000012956	srsf2a	50	92.241	ENSTGUG00000007799	-	52	92.241	Taeniopygia_guttata
ENSMALG00000012956	srsf2a	50	99.123	ENSTRUG00000018104	srsf2a	50	99.123	Takifugu_rubripes
ENSMALG00000012956	srsf2a	53	86.992	ENSTRUG00000024363	srsf2b	50	88.596	Takifugu_rubripes
ENSMALG00000012956	srsf2a	50	99.123	ENSTNIG00000001280	srsf2a	51	99.123	Tetraodon_nigroviridis
ENSMALG00000012956	srsf2a	50	93.860	ENSXETG00000025271	srsf2	52	93.860	Xenopus_tropicalis
ENSMALG00000012956	srsf2a	50	100.000	ENSXCOG00000005917	srsf2a	52	100.000	Xiphophorus_couchianus