EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000012992 (Gene tree)
Gene ID: 109969664
Gene Symbol: a1cf
Alias: acf
Full Name: APOBEC1 complementation factor-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 13348 bases
Position: chrKV884865.1:581666-595013
Accession: 109969664
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000018633	DND1_DSRM	PF14709.7	3.2e-27	1	1
ENSMALP00000018633	RRM_1	PF00076.22	3.6e-41	1	3
ENSMALP00000018633	RRM_1	PF00076.22	3.6e-41	2	3
ENSMALP00000018633	RRM_1	PF00076.22	3.6e-41	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000018996	-	1656	XM_020616705	ENSMALP00000018633	551 (aa)	XP_020472361	-

Gene Model

Click here to download ENSMALG00000012992's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000012992's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000012992	a1cf	53	55.290	ENSMALG00000012279	syncripl	72	45.349
ENSMALG00000012992	a1cf	53	53.242	ENSMALG00000008623	hnrnpr	67	43.750
ENSMALG00000012992	a1cf	94	53.846	ENSMALG00000005167	rbm47	82	53.462
ENSMALG00000012992	a1cf	52	63.542	ENSMALG00000006185	rbm46	62	63.542

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000012992	a1cf	100	72.927	ENSG00000148584	A1CF	100	87.129	Homo_sapiens
ENSMALG00000012992	a1cf	93	93.229	ENSAPOG00000008259	a1cf	100	83.012	Acanthochromis_polyacanthus
ENSMALG00000012992	a1cf	100	72.027	ENSAMEG00000000523	A1CF	100	72.910	Ailuropoda_melanoleuca
ENSMALG00000012992	a1cf	100	81.788	ENSACIG00000008632	a1cf	100	81.954	Amphilophus_citrinellus
ENSMALG00000012992	a1cf	100	81.081	ENSAOCG00000023744	a1cf	93	92.239	Amphiprion_ocellaris
ENSMALG00000012992	a1cf	100	79.833	ENSAPEG00000009537	a1cf	100	79.967	Amphiprion_percula
ENSMALG00000012992	a1cf	100	83.223	ENSATEG00000013720	a1cf	100	83.389	Anabas_testudineus
ENSMALG00000012992	a1cf	100	72.773	ENSAPLG00000002964	A1CF	100	72.773	Anas_platyrhynchos
ENSMALG00000012992	a1cf	100	73.208	ENSACAG00000015269	A1CF	100	73.208	Anolis_carolinensis
ENSMALG00000012992	a1cf	100	73.096	ENSANAG00000019974	A1CF	100	73.435	Aotus_nancymaae
ENSMALG00000012992	a1cf	100	83.077	ENSACLG00000017428	a1cf	100	83.248	Astatotilapia_calliptera
ENSMALG00000012992	a1cf	100	70.888	ENSAMXG00000018180	a1cf	100	70.888	Astyanax_mexicanus
ENSMALG00000012992	a1cf	100	72.973	ENSBTAG00000021195	A1CF	99	76.262	Bos_taurus
ENSMALG00000012992	a1cf	100	71.953	ENSCJAG00000005045	A1CF	100	72.287	Callithrix_jacchus
ENSMALG00000012992	a1cf	100	72.651	ENSCAFG00000015581	A1CF	100	73.322	Canis_familiaris
ENSMALG00000012992	a1cf	100	72.651	ENSCAFG00020026421	A1CF	98	84.333	Canis_lupus_dingo
ENSMALG00000012992	a1cf	100	72.167	ENSCHIG00000020411	A1CF	100	72.500	Capra_hircus
ENSMALG00000012992	a1cf	94	73.333	ENSTSYG00000001755	A1CF	100	73.874	Carlito_syrichta
ENSMALG00000012992	a1cf	100	72.886	ENSCAPG00000017386	A1CF	100	72.595	Cavia_aperea
ENSMALG00000012992	a1cf	100	71.119	ENSCPOG00000009807	A1CF	100	71.452	Cavia_porcellus
ENSMALG00000012992	a1cf	100	72.074	ENSCCAG00000018168	A1CF	100	72.074	Cebus_capucinus
ENSMALG00000012992	a1cf	100	73.175	ENSCATG00000043715	A1CF	100	73.175	Cercocebus_atys
ENSMALG00000012992	a1cf	100	71.215	ENSCLAG00000010424	A1CF	100	71.714	Chinchilla_lanigera
ENSMALG00000012992	a1cf	100	72.027	ENSCSAG00000007032	A1CF	100	72.027	Chlorocebus_sabaeus
ENSMALG00000012992	a1cf	98	69.440	ENSCHOG00000009089	A1CF	99	70.119	Choloepus_hoffmanni
ENSMALG00000012992	a1cf	100	73.445	ENSCPBG00000026464	A1CF	100	73.445	Chrysemys_picta_bellii
ENSMALG00000012992	a1cf	100	72.027	ENSCANG00000038032	A1CF	100	72.027	Colobus_angolensis_palliatus
ENSMALG00000012992	a1cf	100	72.000	ENSCGRG00001017413	A1cf	100	72.333	Cricetulus_griseus_chok1gshd
ENSMALG00000012992	a1cf	100	72.000	ENSCGRG00000017332	A1cf	100	72.333	Cricetulus_griseus_crigri
ENSMALG00000012992	a1cf	100	80.268	ENSCSEG00000002361	a1cf	100	80.602	Cynoglossus_semilaevis
ENSMALG00000012992	a1cf	100	80.363	ENSCVAG00000010520	a1cf	100	80.858	Cyprinodon_variegatus
ENSMALG00000012992	a1cf	100	77.589	ENSDARG00000002968	a1cf	100	78.268	Danio_rerio
ENSMALG00000012992	a1cf	100	71.667	ENSDNOG00000002829	A1CF	100	72.000	Dasypus_novemcinctus
ENSMALG00000012992	a1cf	80	82.609	ENSETEG00000012527	A1CF	81	82.609	Echinops_telfairi
ENSMALG00000012992	a1cf	100	72.425	ENSEASG00005012924	A1CF	100	73.090	Equus_asinus_asinus
ENSMALG00000012992	a1cf	100	72.093	ENSECAG00000010424	A1CF	100	72.757	Equus_caballus
ENSMALG00000012992	a1cf	79	63.816	ENSEEUG00000000013	A1CF	99	63.816	Erinaceus_europaeus
ENSMALG00000012992	a1cf	100	78.583	ENSELUG00000003159	a1cf	100	78.752	Esox_lucius
ENSMALG00000012992	a1cf	100	73.514	ENSFCAG00000011179	A1CF	100	73.854	Felis_catus
ENSMALG00000012992	a1cf	100	74.617	ENSFALG00000013183	A1CF	100	74.617	Ficedula_albicollis
ENSMALG00000012992	a1cf	100	72.128	ENSFDAG00000019371	A1CF	100	72.635	Fukomys_damarensis
ENSMALG00000012992	a1cf	100	73.279	ENSFHEG00000019652	a1cf	96	89.844	Fundulus_heteroclitus
ENSMALG00000012992	a1cf	95	84.635	ENSGMOG00000018943	a1cf	100	73.090	Gadus_morhua
ENSMALG00000012992	a1cf	94	72.954	ENSGALG00000003765	A1CF	96	72.954	Gallus_gallus
ENSMALG00000012992	a1cf	100	77.604	ENSGAFG00000014868	a1cf	100	77.604	Gambusia_affinis
ENSMALG00000012992	a1cf	100	77.632	ENSGACG00000010241	a1cf	100	78.618	Gasterosteus_aculeatus
ENSMALG00000012992	a1cf	95	71.930	ENSGAGG00000016508	A1CF	98	71.930	Gopherus_agassizii
ENSMALG00000012992	a1cf	100	71.953	ENSGGOG00000009670	A1CF	100	71.953	Gorilla_gorilla
ENSMALG00000012992	a1cf	100	81.291	ENSHBUG00000021959	a1cf	100	81.457	Haplochromis_burtoni
ENSMALG00000012992	a1cf	100	71.167	ENSHGLG00000008955	A1CF	100	71.833	Heterocephalus_glaber_female
ENSMALG00000012992	a1cf	100	70.500	ENSHGLG00100000518	A1CF	100	71.167	Heterocephalus_glaber_male
ENSMALG00000012992	a1cf	100	70.867	ENSHCOG00000017669	a1cf	100	71.452	Hippocampus_comes
ENSMALG00000012992	a1cf	92	78.928	ENSIPUG00000010367	a1cf	97	78.611	Ictalurus_punctatus
ENSMALG00000012992	a1cf	100	76.911	ENSKMAG00000006568	a1cf	100	78.049	Kryptolebias_marmoratus
ENSMALG00000012992	a1cf	99	80.033	ENSLBEG00000020994	a1cf	99	79.675	Labrus_bergylta
ENSMALG00000012992	a1cf	100	74.320	ENSLACG00000008061	A1CF	100	74.320	Latimeria_chalumnae
ENSMALG00000012992	a1cf	100	77.219	ENSLOCG00000006302	a1cf	100	77.387	Lepisosteus_oculatus
ENSMALG00000012992	a1cf	100	71.167	ENSLAFG00000015462	A1CF	100	72.667	Loxodonta_africana
ENSMALG00000012992	a1cf	100	73.005	ENSMFAG00000035948	A1CF	100	73.005	Macaca_fascicularis
ENSMALG00000012992	a1cf	100	73.005	ENSMMUG00000007077	A1CF	100	73.005	Macaca_mulatta
ENSMALG00000012992	a1cf	100	72.835	ENSMNEG00000031454	A1CF	100	72.835	Macaca_nemestrina
ENSMALG00000012992	a1cf	100	72.194	ENSMLEG00000037223	A1CF	100	72.194	Mandrillus_leucophaeus
ENSMALG00000012992	a1cf	100	81.095	ENSMAMG00000010402	a1cf	100	81.758	Mastacembelus_armatus
ENSMALG00000012992	a1cf	100	83.503	ENSMZEG00005013245	a1cf	100	83.503	Maylandia_zebra
ENSMALG00000012992	a1cf	100	72.987	ENSMGAG00000001507	A1CF	100	72.987	Meleagris_gallopavo
ENSMALG00000012992	a1cf	100	71.000	ENSMAUG00000007422	A1cf	100	71.500	Mesocricetus_auratus
ENSMALG00000012992	a1cf	100	71.933	ENSMICG00000003377	A1CF	100	73.277	Microcebus_murinus
ENSMALG00000012992	a1cf	100	72.167	ENSMOCG00000021536	A1cf	100	72.167	Microtus_ochrogaster
ENSMALG00000012992	a1cf	100	72.727	ENSMMOG00000009422	a1cf	100	73.756	Mola_mola
ENSMALG00000012992	a1cf	91	76.762	ENSMODG00000016478	A1CF	99	75.746	Monodelphis_domestica
ENSMALG00000012992	a1cf	100	72.973	MGP_CAROLIEiJ_G0022873	A1cf	100	72.973	Mus_caroli
ENSMALG00000012992	a1cf	100	72.973	ENSMUSG00000052595	A1cf	99	83.000	Mus_musculus
ENSMALG00000012992	a1cf	100	72.804	MGP_PahariEiJ_G0014366	A1cf	100	72.804	Mus_pahari
ENSMALG00000012992	a1cf	100	72.712	MGP_SPRETEiJ_G0023792	A1cf	100	73.051	Mus_spretus
ENSMALG00000012992	a1cf	100	67.504	ENSMPUG00000016971	A1CF	100	68.007	Mustela_putorius_furo
ENSMALG00000012992	a1cf	100	72.333	ENSMLUG00000016071	A1CF	100	72.667	Myotis_lucifugus
ENSMALG00000012992	a1cf	100	71.833	ENSNGAG00000015136	A1cf	100	72.167	Nannospalax_galili
ENSMALG00000012992	a1cf	100	81.291	ENSNBRG00000001712	a1cf	100	81.457	Neolamprologus_brichardi
ENSMALG00000012992	a1cf	100	71.833	ENSNLEG00000012028	A1CF	100	71.833	Nomascus_leucogenys
ENSMALG00000012992	a1cf	94	73.105	ENSMEUG00000015909	A1CF	100	73.105	Notamacropus_eugenii
ENSMALG00000012992	a1cf	91	65.341	ENSOPRG00000010667	A1CF	99	64.457	Ochotona_princeps
ENSMALG00000012992	a1cf	100	81.457	ENSONIG00000019105	a1cf	100	81.457	Oreochromis_niloticus
ENSMALG00000012992	a1cf	73	83.871	ENSOANG00000007360	A1CF	86	83.871	Ornithorhynchus_anatinus
ENSMALG00000012992	a1cf	100	72.513	ENSOCUG00000011587	A1CF	100	73.019	Oryctolagus_cuniculus
ENSMALG00000012992	a1cf	100	78.992	ENSORLG00000013342	a1cf	100	78.992	Oryzias_latipes
ENSMALG00000012992	a1cf	100	77.414	ENSORLG00020000586	a1cf	100	77.905	Oryzias_latipes_hni
ENSMALG00000012992	a1cf	100	77.250	ENSORLG00015018569	a1cf	100	77.741	Oryzias_latipes_hsok
ENSMALG00000012992	a1cf	100	78.441	ENSOMEG00000013531	a1cf	100	78.441	Oryzias_melastigma
ENSMALG00000012992	a1cf	100	71.524	ENSOGAG00000012884	A1CF	100	72.362	Otolemur_garnettii
ENSMALG00000012992	a1cf	100	72.000	ENSOARG00000013695	A1CF	100	72.333	Ovis_aries
ENSMALG00000012992	a1cf	97	70.224	ENSPPAG00000028115	A1CF	99	76.056	Pan_paniscus
ENSMALG00000012992	a1cf	100	72.864	ENSPPRG00000012180	A1CF	100	73.199	Panthera_pardus
ENSMALG00000012992	a1cf	100	72.864	ENSPTIG00000021223	A1CF	100	73.199	Panthera_tigris_altaica
ENSMALG00000012992	a1cf	100	72.927	ENSPTRG00000002508	A1CF	100	72.927	Pan_troglodytes
ENSMALG00000012992	a1cf	100	73.005	ENSPANG00000021988	A1CF	100	73.005	Papio_anubis
ENSMALG00000012992	a1cf	100	76.119	ENSPKIG00000025176	a1cf	100	76.119	Paramormyrops_kingsleyae
ENSMALG00000012992	a1cf	100	73.935	ENSPSIG00000010318	A1CF	100	73.935	Pelodiscus_sinensis
ENSMALG00000012992	a1cf	98	72.792	ENSPMGG00000013359	a1cf	99	73.721	Periophthalmus_magnuspinnatus
ENSMALG00000012992	a1cf	100	72.712	ENSPEMG00000015021	A1cf	100	72.712	Peromyscus_maniculatus_bairdii
ENSMALG00000012992	a1cf	100	72.959	ENSPCIG00000002175	A1CF	100	73.469	Phascolarctos_cinereus
ENSMALG00000012992	a1cf	100	78.990	ENSPFOG00000007437	-	100	79.126	Poecilia_formosa
ENSMALG00000012992	a1cf	100	78.664	ENSPFOG00000006683	a1cf	100	79.126	Poecilia_formosa
ENSMALG00000012992	a1cf	100	79.868	ENSPLAG00000001210	-	100	80.000	Poecilia_latipinna
ENSMALG00000012992	a1cf	100	79.868	ENSPLAG00000000026	a1cf	100	80.000	Poecilia_latipinna
ENSMALG00000012992	a1cf	100	73.480	ENSPMEG00000000921	a1cf	100	74.662	Poecilia_mexicana
ENSMALG00000012992	a1cf	100	72.500	ENSPMEG00000015529	-	100	73.667	Poecilia_mexicana
ENSMALG00000012992	a1cf	100	78.317	ENSPREG00000016298	a1cf	100	78.803	Poecilia_reticulata
ENSMALG00000012992	a1cf	100	72.804	ENSPPYG00000002819	A1CF	100	72.804	Pongo_abelii
ENSMALG00000012992	a1cf	78	57.692	ENSPCAG00000006463	A1CF	79	57.692	Procavia_capensis
ENSMALG00000012992	a1cf	100	71.215	ENSPCOG00000024172	A1CF	100	72.591	Propithecus_coquereli
ENSMALG00000012992	a1cf	100	80.556	ENSPNYG00000017944	a1cf	100	80.719	Pundamilia_nyererei
ENSMALG00000012992	a1cf	100	78.297	ENSPNAG00000007704	a1cf	100	78.297	Pygocentrus_nattereri
ENSMALG00000012992	a1cf	100	73.142	ENSRNOG00000033195	A1cf	100	73.142	Rattus_norvegicus
ENSMALG00000012992	a1cf	100	66.946	ENSRBIG00000042892	A1CF	100	70.238	Rhinopithecus_bieti
ENSMALG00000012992	a1cf	100	72.027	ENSRROG00000041398	A1CF	100	72.027	Rhinopithecus_roxellana
ENSMALG00000012992	a1cf	100	72.074	ENSSBOG00000021930	A1CF	100	72.408	Saimiri_boliviensis_boliviensis
ENSMALG00000012992	a1cf	100	73.220	ENSSHAG00000005096	A1CF	100	73.220	Sarcophilus_harrisii
ENSMALG00000012992	a1cf	100	79.097	ENSSFOG00015011774	a1cf	100	79.097	Scleropages_formosus
ENSMALG00000012992	a1cf	100	79.869	ENSSMAG00000013271	a1cf	100	80.524	Scophthalmus_maximus
ENSMALG00000012992	a1cf	100	84.122	ENSSDUG00000013930	a1cf	100	83.389	Seriola_dumerili
ENSMALG00000012992	a1cf	100	83.944	ENSSLDG00000004290	a1cf	100	83.944	Seriola_lalandi_dorsalis
ENSMALG00000012992	a1cf	94	64.706	ENSSARG00000005940	A1CF	95	65.597	Sorex_araneus
ENSMALG00000012992	a1cf	95	72.518	ENSSPUG00000006797	A1CF	95	72.518	Sphenodon_punctatus
ENSMALG00000012992	a1cf	100	72.833	ENSSSCG00000010431	A1CF	100	73.167	Sus_scrofa
ENSMALG00000012992	a1cf	100	72.471	ENSTGUG00000005090	A1CF	100	72.803	Taeniopygia_guttata
ENSMALG00000012992	a1cf	100	77.524	ENSTRUG00000001982	a1cf	100	77.687	Takifugu_rubripes
ENSMALG00000012992	a1cf	100	76.948	ENSTNIG00000003580	a1cf	100	76.948	Tetraodon_nigroviridis
ENSMALG00000012992	a1cf	97	67.539	ENSTTRG00000013190	A1CF	95	68.063	Tursiops_truncatus
ENSMALG00000012992	a1cf	100	73.514	ENSUAMG00000020065	A1CF	100	73.684	Ursus_americanus
ENSMALG00000012992	a1cf	100	72.773	ENSUMAG00000011162	A1CF	100	72.941	Ursus_maritimus
ENSMALG00000012992	a1cf	86	70.406	ENSVPAG00000006130	A1CF	86	70.406	Vicugna_pacos
ENSMALG00000012992	a1cf	100	74.150	ENSVVUG00000002504	A1CF	99	76.449	Vulpes_vulpes
ENSMALG00000012992	a1cf	100	67.731	ENSXETG00000006611	a1cf	100	67.731	Xenopus_tropicalis
ENSMALG00000012992	a1cf	100	80.198	ENSXCOG00000003302	a1cf	100	80.363	Xiphophorus_couchianus
ENSMALG00000012992	a1cf	100	79.153	ENSXMAG00000016703	a1cf	100	79.316	Xiphophorus_maculatus