EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMALG00000013020 (Gene tree)
Gene ID
109963864
Gene Symbol
-
Alias
-
Full Name
poly(A) binding protein cytoplasmic 1
Gene Type
protein_coding
Species
Monopterus_albus
Status
putative
Strand
Minus strand
Length
8597 bases
Position
chrKV884769.1:754469-763065
Accession
109963864
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMALP00000018698PABPPF00658.185.7e-3211
ENSMALP00000018677PABPPF00658.186.7e-3211
ENSMALP00000018698RRM_5PF13893.62.7e-0812
ENSMALP00000018698RRM_5PF13893.62.7e-0822
ENSMALP00000018677RRM_5PF13893.63.9e-0812
ENSMALP00000018677RRM_5PF13893.63.9e-0822
ENSMALP00000018698RRM_1PF00076.222.9e-9314
ENSMALP00000018698RRM_1PF00076.222.9e-9324
ENSMALP00000018698RRM_1PF00076.222.9e-9334
ENSMALP00000018698RRM_1PF00076.222.9e-9344
ENSMALP00000018677RRM_1PF00076.224.3e-9314
ENSMALP00000018677RRM_1PF00076.224.3e-9324
ENSMALP00000018677RRM_1PF00076.224.3e-9334
ENSMALP00000018677RRM_1PF00076.224.3e-9344
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMALT00000019061-1770-ENSMALP00000018698589 (aa)--
ENSMALT00000019040-1909XM_020606764ENSMALP00000018677635 (aa)XP_020462420UPI0009B384D5
Gene Model
Click here to download ENSMALG00000013020's gene model file
Pathways
Pathway IDPathway NameSource
malb03013RNA transportKEGG
malb03015mRNA surveillance pathwayKEGG
malb03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000013020's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMALG00000013020-5935.252ENSMALG00000007782TIAL17231.278
ENSMALG00000013020-7135.106ENSMALG00000016791-7235.106
ENSMALG00000013020-5736.000ENSMALG00000012647rbm197036.000
ENSMALG00000013020-6234.615ENSMALG00000010070elavl1a9534.615
ENSMALG00000013020-9668.233ENSMALG00000021622pabpc1l10068.233
ENSMALG00000013020-6330.108ENSMALG00000016924-7530.108
ENSMALG00000013020-6336.145ENSMALG00000016432elavl48436.145
ENSMALG00000013020-5738.554ENSMALG00000012778-6538.554
ENSMALG00000013020-6036.986ENSMALG00000011641celf3a8336.986
ENSMALG00000013020-10087.395ENSMALG00000006066pabpc1b10087.352
ENSMALG00000013020-6337.349ENSMALG00000016659elavl39037.349
ENSMALG00000013020-6939.759ENSMALG00000017703celf5a6639.759
ENSMALG00000013020-6034.884ENSMALG00000000961-5835.714
ENSMALG00000013020-5632.667ENSMALG00000022126rbm456430.769
ENSMALG00000013020-6337.349ENSMALG00000003411elavl28237.349
ENSMALG00000013020-5037.349ENSMALG00000001696celf45637.349
ENSMALG00000013020-5235.065ENSMALG00000018270-5035.065
ENSMALG00000013020-9876.090ENSMALG00000011017pabpc49876.070
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMALG00000013020-6280.102ENSG00000184388PABPC1L2B9880.102Homo_sapiens
ENSMALG00000013020-6280.102ENSG00000186288PABPC1L2A9880.102Homo_sapiens
ENSMALG00000013020-10090.439ENSAPOG00000017776pabpc1b10089.969Acanthochromis_polyacanthus
ENSMALG00000013020-10098.110ENSAPOG00000015105pabpc1a10098.110Acanthochromis_polyacanthus
ENSMALG00000013020-6280.102ENSAMEG00000019441-9880.102Ailuropoda_melanoleuca
ENSMALG00000013020-10097.953ENSACIG00000004685pabpc1a10097.953Amphilophus_citrinellus
ENSMALG00000013020-10086.838ENSACIG00000018366pabpc1b10086.517Amphilophus_citrinellus
ENSMALG00000013020-10089.969ENSAOCG00000019839pabpc1b10089.498Amphiprion_ocellaris
ENSMALG00000013020-10098.268ENSAOCG00000011656pabpc1a10098.268Amphiprion_ocellaris
ENSMALG00000013020-10089.969ENSAPEG00000010435pabpc1b10089.498Amphiprion_percula
ENSMALG00000013020-10098.268ENSAPEG00000006963pabpc1a10098.268Amphiprion_percula
ENSMALG00000013020-10098.583ENSATEG00000024852pabpc1a10098.583Anabas_testudineus
ENSMALG00000013020-10089.358ENSATEG00000012917pabpc1b10089.358Anabas_testudineus
ENSMALG00000013020-6280.102ENSANAG00000019431-9880.102Aotus_nancymaae
ENSMALG00000013020-6280.102ENSANAG00000019429-9880.102Aotus_nancymaae
ENSMALG00000013020-10089.342ENSACLG00000014335pabpc1b10089.028Astatotilapia_calliptera
ENSMALG00000013020-9999.279ENSACLG00000009399pabpc1a10099.279Astatotilapia_calliptera
ENSMALG00000013020-10090.282ENSAMXG00000008599pabpc1b10089.969Astyanax_mexicanus
ENSMALG00000013020-6479.024ENSBTAG00000050902-9879.024Bos_taurus
ENSMALG00000013020-6477.033ENSBTAG00000052491-9877.033Bos_taurus
ENSMALG00000013020-6280.102ENSCJAG00000041326-9880.102Callithrix_jacchus
ENSMALG00000013020-6479.024ENSCAFG00020002052-9879.024Canis_lupus_dingo
ENSMALG00000013020-6280.102ENSCHIG00000011138-9880.102Capra_hircus
ENSMALG00000013020-6280.102ENSCHIG00000006283-9880.102Capra_hircus
ENSMALG00000013020-6280.102ENSTSYG00000001775-9880.102Carlito_syrichta
ENSMALG00000013020-6280.102ENSCPOG00000009525-9880.102Cavia_porcellus
ENSMALG00000013020-6280.102ENSCCAG00000031524-9880.102Cebus_capucinus
ENSMALG00000013020-6280.102ENSCATG00000043125-9880.102Cercocebus_atys
ENSMALG00000013020-6280.102ENSCATG00000042826-9880.102Cercocebus_atys
ENSMALG00000013020-6278.061ENSCLAG00000017409-9878.061Chinchilla_lanigera
ENSMALG00000013020-6278.061ENSCLAG00000017412-9878.061Chinchilla_lanigera
ENSMALG00000013020-6280.102ENSCSAG00000000102-9880.102Chlorocebus_sabaeus
ENSMALG00000013020-6279.670ENSCGRG00001023387-9677.436Cricetulus_griseus_chok1gshd
ENSMALG00000013020-9997.943ENSCSEG00000013324pabpc1a10097.943Cynoglossus_semilaevis
ENSMALG00000013020-10088.871ENSCSEG00000015241-10088.401Cynoglossus_semilaevis
ENSMALG00000013020-10097.323ENSCVAG00000021872pabpc1a10097.323Cyprinodon_variegatus
ENSMALG00000013020-10087.324ENSCVAG00000005489pabpc1b10087.011Cyprinodon_variegatus
ENSMALG00000013020-10089.498ENSDARG00000021140pabpc1b9992.199Danio_rerio
ENSMALG00000013020-10091.850ENSDARG00000017219pabpc1a10091.850Danio_rerio
ENSMALG00000013020-6280.423ENSDNOG00000030926-9878.571Dasypus_novemcinctus
ENSMALG00000013020-6277.551ENSDORG00000011362-9877.551Dipodomys_ordii
ENSMALG00000013020-6478.641ENSEASG00005010399-9878.641Equus_asinus_asinus
ENSMALG00000013020-6478.641ENSECAG00000002620-9878.641Equus_caballus
ENSMALG00000013020-6476.020ENSEEUG00000008203-9876.020Erinaceus_europaeus
ENSMALG00000013020-9993.868ENSELUG00000003614pabpc1a10092.767Esox_lucius
ENSMALG00000013020-6458.621ENSELUG00000005389-9758.621Esox_lucius
ENSMALG00000013020-10087.969ENSELUG00000015062-10087.656Esox_lucius
ENSMALG00000013020-6280.102ENSFCAG00000039701-9880.102Felis_catus
ENSMALG00000013020-6280.102ENSFDAG00000005484-9880.102Fukomys_damarensis
ENSMALG00000013020-10088.871ENSFHEG00000008186pabpc1b10088.871Fundulus_heteroclitus
ENSMALG00000013020-10097.638ENSFHEG00000018979pabpc1a10097.638Fundulus_heteroclitus
ENSMALG00000013020-10080.930ENSGMOG00000002448-10079.755Gadus_morhua
ENSMALG00000013020-9993.663ENSGMOG00000013448pabpc1a9993.354Gadus_morhua
ENSMALG00000013020-10089.342ENSGAFG00000010193pabpc1b10089.185Gambusia_affinis
ENSMALG00000013020-10097.165ENSGAFG00000019750pabpc1a10097.165Gambusia_affinis
ENSMALG00000013020-10097.323ENSGACG00000003572pabpc1a10097.323Gasterosteus_aculeatus
ENSMALG00000013020-10087.597ENSGACG00000003771pabpc1b10087.442Gasterosteus_aculeatus
ENSMALG00000013020-6280.102ENSGGOG00000038606-9880.102Gorilla_gorilla
ENSMALG00000013020-6280.102ENSGGOG00000043933-9880.102Gorilla_gorilla
ENSMALG00000013020-10089.342ENSHBUG00000002075pabpc1b10089.028Haplochromis_burtoni
ENSMALG00000013020-9999.279ENSHBUG00000020487pabpc1a10099.279Haplochromis_burtoni
ENSMALG00000013020-6279.082ENSHGLG00000019762-9879.082Heterocephalus_glaber_female
ENSMALG00000013020-6279.082ENSHGLG00000019668-9879.082Heterocephalus_glaber_female
ENSMALG00000013020-6279.082ENSHGLG00100020854-9879.082Heterocephalus_glaber_male
ENSMALG00000013020-10097.795ENSHCOG00000013502pabpc1a10097.795Hippocampus_comes
ENSMALG00000013020-9875.388ENSHCOG00000003175pabpc1b9981.720Hippocampus_comes
ENSMALG00000013020-10090.866ENSIPUG00000008848pabpc1a10090.709Ictalurus_punctatus
ENSMALG00000013020-7657.528ENSIPUG00000021244-6555.094Ictalurus_punctatus
ENSMALG00000013020-8156.716ENSIPUG00000018724-7956.716Ictalurus_punctatus
ENSMALG00000013020-10088.500ENSIPUG00000010791-10088.500Ictalurus_punctatus
ENSMALG00000013020-6279.592ENSSTOG00000026028-9879.592Ictidomys_tridecemlineatus
ENSMALG00000013020-6279.592ENSSTOG00000022096-9879.592Ictidomys_tridecemlineatus
ENSMALG00000013020-6278.571ENSJJAG00000007037-9878.571Jaculus_jaculus
ENSMALG00000013020-10097.638ENSKMAG00000000605pabpc1a10097.638Kryptolebias_marmoratus
ENSMALG00000013020-10090.084ENSKMAG00000008049pabpc1b10089.916Kryptolebias_marmoratus
ENSMALG00000013020-10089.028ENSLBEG00000026845pabpc1b10088.540Labrus_bergylta
ENSMALG00000013020-10097.323ENSLBEG00000024002-10097.323Labrus_bergylta
ENSMALG00000013020-6278.974ENSLAFG00000023096-9878.974Loxodonta_africana
ENSMALG00000013020-6279.695ENSMFAG00000028878-9879.695Macaca_fascicularis
ENSMALG00000013020-6280.102ENSMMUG00000037681-9880.102Macaca_mulatta
ENSMALG00000013020-6280.102ENSMMUG00000009740-9880.102Macaca_mulatta
ENSMALG00000013020-6280.102ENSMMUG00000039929-9880.102Macaca_mulatta
ENSMALG00000013020-6280.102ENSMNEG00000037732-9880.102Macaca_nemestrina
ENSMALG00000013020-6280.102ENSMLEG00000027495-9880.102Mandrillus_leucophaeus
ENSMALG00000013020-9999.519ENSMAMG00000004502-10099.519Mastacembelus_armatus
ENSMALG00000013020-10089.342ENSMAMG00000014610pabpc1b10089.185Mastacembelus_armatus
ENSMALG00000013020-10089.342ENSMZEG00005026745pabpc1b10089.028Maylandia_zebra
ENSMALG00000013020-9999.279ENSMZEG00005025416pabpc1a10099.279Maylandia_zebra
ENSMALG00000013020-6280.102ENSMICG00000047642-9880.102Microcebus_murinus
ENSMALG00000013020-10089.430ENSMMOG00000018009pabpc1b10089.430Mola_mola
ENSMALG00000013020-9998.317ENSMMOG00000018044pabpc1a10098.317Mola_mola
ENSMALG00000013020-9966.144ENSMODG00000015024-9965.831Monodelphis_domestica
ENSMALG00000013020-9872.392ENSMODG00000013156-9872.843Monodelphis_domestica
ENSMALG00000013020-6281.967ENSNGAG00000012688-9878.571Nannospalax_galili
ENSMALG00000013020-10091.385ENSNBRG00000013737pabpc1b10091.047Neolamprologus_brichardi
ENSMALG00000013020-9999.279ENSNBRG00000003068-10099.279Neolamprologus_brichardi
ENSMALG00000013020-6280.102ENSNLEG00000018128-9880.102Nomascus_leucogenys
ENSMALG00000013020-6279.592ENSODEG00000018540-9879.592Octodon_degus
ENSMALG00000013020-10089.498ENSONIG00000002717pabpc1b10089.185Oreochromis_niloticus
ENSMALG00000013020-10096.693ENSONIG00000006871-10096.693Oreochromis_niloticus
ENSMALG00000013020-6280.102ENSOCUG00000002565-9880.102Oryctolagus_cuniculus
ENSMALG00000013020-9999.048ENSORLG00000002691pabpc1a10096.850Oryzias_latipes
ENSMALG00000013020-9984.738ENSORLG00000003008-9984.579Oryzias_latipes
ENSMALG00000013020-10097.008ENSORLG00020022398pabpc1a10097.008Oryzias_latipes_hni
ENSMALG00000013020-10083.830ENSORLG00020022259-10083.673Oryzias_latipes_hni
ENSMALG00000013020-10084.301ENSORLG00015010932-10084.144Oryzias_latipes_hsok
ENSMALG00000013020-10096.850ENSORLG00015013633pabpc110096.850Oryzias_latipes_hsok
ENSMALG00000013020-10097.795ENSOMEG00000020219pabpc1a10097.795Oryzias_melastigma
ENSMALG00000013020-9981.007ENSOMEG00000013627pabpc1b9883.019Oryzias_melastigma
ENSMALG00000013020-6280.102ENSOGAG00000029513-9880.102Otolemur_garnettii
ENSMALG00000013020-6280.102ENSOGAG00000026047-9880.102Otolemur_garnettii
ENSMALG00000013020-6280.102ENSOARG00000005943-9880.102Ovis_aries
ENSMALG00000013020-6280.102ENSPPAG00000012920-9880.102Pan_paniscus
ENSMALG00000013020-6280.102ENSPPRG00000011809-9880.102Panthera_pardus
ENSMALG00000013020-6280.102ENSPPRG00000011804-9880.102Panthera_pardus
ENSMALG00000013020-6280.102ENSPTRG00000028252-9880.102Pan_troglodytes
ENSMALG00000013020-6280.102ENSPANG00000011549-9880.102Papio_anubis
ENSMALG00000013020-10089.812ENSPKIG00000005676pabpc1b10089.812Paramormyrops_kingsleyae
ENSMALG00000013020-7692.152ENSPMGG00000023134-9792.152Periophthalmus_magnuspinnatus
ENSMALG00000013020-7895.879ENSPMGG00000022487pabpc1a9595.879Periophthalmus_magnuspinnatus
ENSMALG00000013020-9971.791ENSPCIG00000016995-5571.770Phascolarctos_cinereus
ENSMALG00000013020-10088.871ENSPFOG00000005917pabpc1b10088.871Poecilia_formosa
ENSMALG00000013020-10095.981ENSPFOG00000010815pabpc1a10095.981Poecilia_formosa
ENSMALG00000013020-10097.953ENSPLAG00000004114pabpc1a10097.953Poecilia_latipinna
ENSMALG00000013020-10089.185ENSPLAG00000001388pabpc1b10089.185Poecilia_latipinna
ENSMALG00000013020-10088.871ENSPMEG00000014399pabpc1b10088.871Poecilia_mexicana
ENSMALG00000013020-10097.953ENSPMEG00000001334pabpc1a10097.953Poecilia_mexicana
ENSMALG00000013020-9999.279ENSPREG00000019595pabpc1a10099.279Poecilia_reticulata
ENSMALG00000013020-10089.185ENSPREG00000010911pabpc1b10089.185Poecilia_reticulata
ENSMALG00000013020-6280.102ENSPPYG00000020468-9880.102Pongo_abelii
ENSMALG00000013020-6480.102ENSPCAG00000005308-9880.102Procavia_capensis
ENSMALG00000013020-6279.592ENSPCOG00000026349-9879.592Propithecus_coquereli
ENSMALG00000013020-6480.513ENSPVAG00000016117-9880.513Pteropus_vampyrus
ENSMALG00000013020-10097.480ENSPNYG00000005192pabpc1a10097.480Pundamilia_nyererei
ENSMALG00000013020-10089.342ENSPNYG00000012578pabpc1b10089.028Pundamilia_nyererei
ENSMALG00000013020-10091.680ENSPNAG00000028408pabpc1a10091.209Pygocentrus_nattereri
ENSMALG00000013020-10089.498ENSPNAG00000024626pabpc1b10089.185Pygocentrus_nattereri
ENSMALG00000013020-8789.437ENSRBIG00000028738-9589.437Rhinopithecus_bieti
ENSMALG00000013020-6280.102ENSRBIG00000027173-9880.102Rhinopithecus_bieti
ENSMALG00000013020-6280.102ENSRROG00000017404-9880.102Rhinopithecus_roxellana
ENSMALG00000013020-9864.103ENSSHAG00000000511-10063.942Sarcophilus_harrisii
ENSMALG00000013020-7878.613ENSSFOG00015019668-8878.613Scleropages_formosus
ENSMALG00000013020-10089.953ENSSFOG00015006662pabpc1a10089.796Scleropages_formosus
ENSMALG00000013020-10090.581ENSSFOG00015002752-10090.110Scleropages_formosus
ENSMALG00000013020-10097.480ENSSMAG00000010803pabpc1a10097.480Scophthalmus_maximus
ENSMALG00000013020-10088.558ENSSMAG00000006869pabpc1b10088.245Scophthalmus_maximus
ENSMALG00000013020-10098.268ENSSDUG00000006675pabpc1a10098.268Seriola_dumerili
ENSMALG00000013020-10088.245ENSSDUG00000011965pabpc1b10087.912Seriola_dumerili
ENSMALG00000013020-10098.268ENSSLDG00000011661pabpc1a10098.268Seriola_lalandi_dorsalis
ENSMALG00000013020-10089.891ENSSLDG00000014156pabpc1b10089.564Seriola_lalandi_dorsalis
ENSMALG00000013020-10090.125ENSSPAG00000019265pabpc1b10089.796Stegastes_partitus
ENSMALG00000013020-10098.583ENSSPAG00000014453-10098.583Stegastes_partitus
ENSMALG00000013020-6280.102ENSSSCG00000032167-9880.102Sus_scrofa
ENSMALG00000013020-6280.102ENSSSCG00000036336-9880.102Sus_scrofa
ENSMALG00000013020-10086.072ENSTRUG00000003767-10086.072Takifugu_rubripes
ENSMALG00000013020-10094.497ENSTRUG00000011577-10094.654Takifugu_rubripes
ENSMALG00000013020-10086.449ENSTNIG00000009153pabpc1b10085.981Tetraodon_nigroviridis
ENSMALG00000013020-10091.628ENSTNIG00000013307pabpc1a10091.783Tetraodon_nigroviridis
ENSMALG00000013020-6280.102ENSTTRG00000013181-9880.102Tursiops_truncatus
ENSMALG00000013020-6280.102ENSUAMG00000008089-9880.102Ursus_americanus
ENSMALG00000013020-6280.102ENSUMAG00000003364-9880.102Ursus_maritimus
ENSMALG00000013020-9754.693ENSUMAG00000023926-8969.890Ursus_maritimus
ENSMALG00000013020-6379.000ENSVVUG00000015892-9779.000Vulpes_vulpes
ENSMALG00000013020-9746.437ENSXETG00000015439-9745.700Xenopus_tropicalis
ENSMALG00000013020-10085.878ENSXCOG00000019901pabpc1b10085.197Xiphophorus_couchianus
ENSMALG00000013020-10096.167ENSXCOG00000017066pabpc1a10096.167Xiphophorus_couchianus
ENSMALG00000013020-10097.795ENSXMAG00000002555pabpc1a10097.795Xiphophorus_maculatus
ENSMALG00000013020-10089.342ENSXMAG00000003753pabpc1b10089.185Xiphophorus_maculatus

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