EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000013282 (Gene tree)
Gene ID: 109957519
Gene Symbol: ptcd3
Alias: fa08d08|wu:fa08d08|zgc:123014
Full Name: pentatricopeptide repeat domain 3
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 13097 bases
Position: chrKV884715.1:2964576-2977672
Accession: 109957519
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000019036	PPR	PF01535.20	5.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000019418	-	3893	XM_020595447	ENSMALP00000019036	668 (aa)	XP_020451103	UPI0009B373FB

Gene Model

Click here to download ENSMALG00000013282's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000013282's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000013282	ptcd3	90	70.617	ENSACIG00000022263	ptcd3	100	70.617	Amphilophus_citrinellus
ENSMALG00000013282	ptcd3	100	74.439	ENSAOCG00000017186	ptcd3	98	74.439	Amphiprion_ocellaris
ENSMALG00000013282	ptcd3	100	74.589	ENSAPEG00000016069	ptcd3	98	74.589	Amphiprion_percula
ENSMALG00000013282	ptcd3	88	47.386	ENSAPLG00000005086	PTCD3	97	47.386	Anas_platyrhynchos
ENSMALG00000013282	ptcd3	100	76.048	ENSACLG00000020653	ptcd3	100	76.048	Astatotilapia_calliptera
ENSMALG00000013282	ptcd3	100	56.737	ENSAMXG00000011570	ptcd3	100	56.737	Astyanax_mexicanus
ENSMALG00000013282	ptcd3	99	69.757	ENSCVAG00000020820	ptcd3	98	71.664	Cyprinodon_variegatus
ENSMALG00000013282	ptcd3	85	69.542	ENSGAFG00000015291	ptcd3	93	69.542	Gambusia_affinis
ENSMALG00000013282	ptcd3	100	76.347	ENSHBUG00000020056	ptcd3	100	76.347	Haplochromis_burtoni
ENSMALG00000013282	ptcd3	99	73.123	ENSLBEG00000015349	ptcd3	99	73.123	Labrus_bergylta
ENSMALG00000013282	ptcd3	100	76.347	ENSMZEG00005004980	ptcd3	100	76.347	Maylandia_zebra
ENSMALG00000013282	ptcd3	91	43.112	ENSMGAG00000013124	PTCD3	99	43.680	Meleagris_gallopavo
ENSMALG00000013282	ptcd3	90	70.167	ENSNBRG00000000447	ptcd3	100	70.167	Neolamprologus_brichardi
ENSMALG00000013282	ptcd3	100	76.497	ENSONIG00000015886	ptcd3	100	76.497	Oreochromis_niloticus
ENSMALG00000013282	ptcd3	100	71.856	ENSORLG00000008776	ptcd3	100	72.477	Oryzias_latipes
ENSMALG00000013282	ptcd3	99	71.214	ENSORLG00020020676	ptcd3	99	71.664	Oryzias_latipes_hni
ENSMALG00000013282	ptcd3	87	58.863	ENSORLG00015015978	ptcd3	99	59.532	Oryzias_latipes_hsok
ENSMALG00000013282	ptcd3	98	70.840	ENSPFOG00000004442	ptcd3	100	70.840	Poecilia_formosa
ENSMALG00000013282	ptcd3	90	70.064	ENSPLAG00000021401	ptcd3	100	70.064	Poecilia_latipinna
ENSMALG00000013282	ptcd3	88	69.610	ENSPMEG00000007153	ptcd3	100	69.610	Poecilia_mexicana
ENSMALG00000013282	ptcd3	95	54.391	ENSSFOG00015019643	ptcd3	97	55.537	Scleropages_formosus
ENSMALG00000013282	ptcd3	80	51.296	ENSTGUG00000010760	PTCD3	100	51.296	Taeniopygia_guttata
ENSMALG00000013282	ptcd3	100	63.827	ENSTRUG00000003939	ptcd3	100	63.827	Takifugu_rubripes