EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000013306 (Gene tree)
Gene ID: 109955897
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 79157 bases
Position: chrKV884705.1:2465785-2544941
Accession: 109955897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000019112	ResIII	PF04851.15	2.6e-05	1	1
ENSMALP00000019112	BRK	PF07533.16	6.7e-32	1	2
ENSMALP00000019112	BRK	PF07533.16	6.7e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000019493	-	8673	XM_020592488	ENSMALP00000019112	2890 (aa)	XP_020448144	-

Gene Model

Click here to download ENSMALG00000013306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000013306's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000013306	chd9	66	67.546	ENSMALG00000004389	chd7	82	67.618
ENSMALG00000013306	chd9	59	60.823	ENSMALG00000011572	chd8	65	64.117

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000013306	chd9	73	62.477	ENSG00000177200	CHD9	99	71.074	Homo_sapiens
ENSMALG00000013306	chd9	99	84.694	ENSAPOG00000023034	chd9	98	88.731	Acanthochromis_polyacanthus
ENSMALG00000013306	chd9	99	82.043	ENSACIG00000004097	chd9	98	82.551	Amphilophus_citrinellus
ENSMALG00000013306	chd9	99	86.359	ENSAOCG00000005487	chd9	98	89.138	Amphiprion_ocellaris
ENSMALG00000013306	chd9	99	86.466	ENSAPEG00000009859	chd9	98	89.260	Amphiprion_percula
ENSMALG00000013306	chd9	99	87.621	ENSATEG00000002748	chd9	99	87.621	Anabas_testudineus
ENSMALG00000013306	chd9	73	63.450	ENSACAG00000016150	CHD9	83	70.008	Anolis_carolinensis
ENSMALG00000013306	chd9	73	62.306	ENSANAG00000015630	CHD9	92	63.668	Aotus_nancymaae
ENSMALG00000013306	chd9	99	82.933	ENSACLG00000016899	chd9	99	83.448	Astatotilapia_calliptera
ENSMALG00000013306	chd9	99	69.244	ENSAMXG00000005652	chd9	98	76.212	Astyanax_mexicanus
ENSMALG00000013306	chd9	73	62.198	ENSBTAG00000002287	CHD9	79	69.962	Bos_taurus
ENSMALG00000013306	chd9	73	62.203	ENSCJAG00000001573	CHD9	92	64.014	Callithrix_jacchus
ENSMALG00000013306	chd9	73	62.194	ENSCAFG00000009699	CHD9	79	70.325	Canis_familiaris
ENSMALG00000013306	chd9	73	62.194	ENSCAFG00020002879	CHD9	91	64.360	Canis_lupus_dingo
ENSMALG00000013306	chd9	94	61.700	ENSCHIG00000021000	CHD9	56	74.375	Capra_hircus
ENSMALG00000013306	chd9	73	62.225	ENSTSYG00000007693	CHD9	91	63.668	Carlito_syrichta
ENSMALG00000013306	chd9	73	56.089	ENSCAPG00000011604	CHD9	59	61.952	Cavia_aperea
ENSMALG00000013306	chd9	73	58.958	ENSCPOG00000036544	CHD9	83	67.065	Cavia_porcellus
ENSMALG00000013306	chd9	73	62.586	ENSCCAG00000036178	CHD9	92	64.360	Cebus_capucinus
ENSMALG00000013306	chd9	73	62.511	ENSCATG00000036753	CHD9	91	64.164	Cercocebus_atys
ENSMALG00000013306	chd9	73	62.546	ENSCLAG00000007137	CHD9	95	82.190	Chinchilla_lanigera
ENSMALG00000013306	chd9	73	62.757	ENSCSAG00000005311	CHD9	79	70.367	Chlorocebus_sabaeus
ENSMALG00000013306	chd9	71	82.692	ENSCHOG00000003935	CHD9	55	82.692	Choloepus_hoffmanni
ENSMALG00000013306	chd9	89	82.296	ENSCPBG00000012459	CHD9	84	81.195	Chrysemys_picta_bellii
ENSMALG00000013306	chd9	73	62.597	ENSCANG00000030349	CHD9	91	64.706	Colobus_angolensis_palliatus
ENSMALG00000013306	chd9	97	61.409	ENSCGRG00001016150	Chd9	84	69.501	Cricetulus_griseus_chok1gshd
ENSMALG00000013306	chd9	97	61.409	ENSCGRG00000012850	Chd9	95	82.134	Cricetulus_griseus_crigri
ENSMALG00000013306	chd9	94	80.333	ENSCSEG00000009209	chd9	97	83.026	Cynoglossus_semilaevis
ENSMALG00000013306	chd9	97	79.685	ENSCVAG00000016195	chd9	97	80.230	Cyprinodon_variegatus
ENSMALG00000013306	chd9	82	75.670	ENSDARG00000074498	chd9	95	76.978	Danio_rerio
ENSMALG00000013306	chd9	55	75.933	ENSDNOG00000006045	CHD9	94	71.093	Dasypus_novemcinctus
ENSMALG00000013306	chd9	64	91.200	ENSETEG00000009565	CHD9	78	73.262	Echinops_telfairi
ENSMALG00000013306	chd9	88	77.638	ENSEASG00005014832	CHD9	95	79.824	Equus_asinus_asinus
ENSMALG00000013306	chd9	73	62.506	ENSECAG00000011505	CHD9	94	69.912	Equus_caballus
ENSMALG00000013306	chd9	58	88.341	ENSEEUG00000014515	CHD9	67	83.978	Erinaceus_europaeus
ENSMALG00000013306	chd9	87	80.405	ENSELUG00000006031	chd9	98	78.722	Esox_lucius
ENSMALG00000013306	chd9	73	62.421	ENSFCAG00000022534	CHD9	97	61.449	Felis_catus
ENSMALG00000013306	chd9	83	69.035	ENSFALG00000013276	CHD9	95	71.634	Ficedula_albicollis
ENSMALG00000013306	chd9	73	62.271	ENSFDAG00000021037	CHD9	84	70.229	Fukomys_damarensis
ENSMALG00000013306	chd9	93	82.497	ENSFHEG00000006068	chd9	98	85.961	Fundulus_heteroclitus
ENSMALG00000013306	chd9	67	84.922	ENSGMOG00000006040	chd9	81	84.303	Gadus_morhua
ENSMALG00000013306	chd9	95	62.721	ENSGALG00000039178	CHD9	81	71.077	Gallus_gallus
ENSMALG00000013306	chd9	99	79.861	ENSGAFG00000010014	chd9	97	85.556	Gambusia_affinis
ENSMALG00000013306	chd9	82	83.878	ENSGACG00000016694	chd9	97	89.599	Gasterosteus_aculeatus
ENSMALG00000013306	chd9	73	62.523	ENSGGOG00000014816	CHD9	92	64.360	Gorilla_gorilla
ENSMALG00000013306	chd9	99	81.985	ENSHBUG00000023322	chd9	98	87.190	Haplochromis_burtoni
ENSMALG00000013306	chd9	97	61.581	ENSHGLG00000014938	CHD9	95	81.655	Heterocephalus_glaber_female
ENSMALG00000013306	chd9	97	77.069	ENSHCOG00000000937	chd9	96	81.292	Hippocampus_comes
ENSMALG00000013306	chd9	82	76.645	ENSIPUG00000016448	chd9	94	78.194	Ictalurus_punctatus
ENSMALG00000013306	chd9	73	62.443	ENSSTOG00000022273	CHD9	95	82.310	Ictidomys_tridecemlineatus
ENSMALG00000013306	chd9	99	80.260	ENSKMAG00000016784	chd9	98	86.902	Kryptolebias_marmoratus
ENSMALG00000013306	chd9	94	84.273	ENSLBEG00000012077	chd9	98	87.728	Labrus_bergylta
ENSMALG00000013306	chd9	99	58.140	ENSLACG00000005557	CHD9	79	66.079	Latimeria_chalumnae
ENSMALG00000013306	chd9	87	74.242	ENSLOCG00000007225	chd9	95	76.248	Lepisosteus_oculatus
ENSMALG00000013306	chd9	73	61.604	ENSLAFG00000015374	CHD9	80	69.525	Loxodonta_africana
ENSMALG00000013306	chd9	73	62.802	ENSMFAG00000041354	CHD9	92	70.907	Macaca_fascicularis
ENSMALG00000013306	chd9	73	62.802	ENSMMUG00000016310	CHD9	91	64.706	Macaca_mulatta
ENSMALG00000013306	chd9	73	62.855	ENSMNEG00000031494	CHD9	80	72.480	Macaca_nemestrina
ENSMALG00000013306	chd9	73	62.802	ENSMLEG00000043219	CHD9	91	64.706	Mandrillus_leucophaeus
ENSMALG00000013306	chd9	99	85.253	ENSMAMG00000003909	chd9	97	87.645	Mastacembelus_armatus
ENSMALG00000013306	chd9	99	81.770	ENSMZEG00005006581	chd9	98	88.195	Maylandia_zebra
ENSMALG00000013306	chd9	88	62.400	ENSMGAG00000004642	CHD9	59	71.645	Meleagris_gallopavo
ENSMALG00000013306	chd9	73	62.096	ENSMICG00000016679	CHD9	91	64.360	Microcebus_murinus
ENSMALG00000013306	chd9	99	81.186	ENSMMOG00000016406	chd9	99	80.946	Mola_mola
ENSMALG00000013306	chd9	73	64.771	ENSMODG00000013142	-	96	77.674	Monodelphis_domestica
ENSMALG00000013306	chd9	73	62.483	MGP_CAROLIEiJ_G0031364	Chd9	84	70.176	Mus_caroli
ENSMALG00000013306	chd9	99	60.228	ENSMUSG00000056608	Chd9	95	78.622	Mus_musculus
ENSMALG00000013306	chd9	93	62.392	MGP_PahariEiJ_G0022964	Chd9	84	68.955	Mus_pahari
ENSMALG00000013306	chd9	73	62.295	MGP_SPRETEiJ_G0032483	Chd9	84	69.631	Mus_spretus
ENSMALG00000013306	chd9	73	62.347	ENSMLUG00000004456	CHD9	79	69.030	Myotis_lucifugus
ENSMALG00000013306	chd9	99	83.356	ENSNBRG00000009423	chd9	98	87.343	Neolamprologus_brichardi
ENSMALG00000013306	chd9	73	62.194	ENSNLEG00000001026	CHD9	80	72.214	Nomascus_leucogenys
ENSMALG00000013306	chd9	66	93.985	ENSMEUG00000008222	-	74	92.810	Notamacropus_eugenii
ENSMALG00000013306	chd9	65	93.985	ENSOPRG00000011168	CHD9	64	86.040	Ochotona_princeps
ENSMALG00000013306	chd9	73	62.266	ENSODEG00000004466	CHD9	84	69.646	Octodon_degus
ENSMALG00000013306	chd9	82	86.996	ENSONIG00000002816	chd9	98	87.654	Oreochromis_niloticus
ENSMALG00000013306	chd9	57	73.716	ENSOCUG00000001016	CHD9	94	70.029	Oryctolagus_cuniculus
ENSMALG00000013306	chd9	81	83.389	ENSORLG00000013810	chd9	94	84.541	Oryzias_latipes
ENSMALG00000013306	chd9	98	78.955	ENSORLG00020020665	chd9	97	80.449	Oryzias_latipes_hni
ENSMALG00000013306	chd9	97	77.583	ENSORLG00015019126	chd9	94	86.468	Oryzias_latipes_hsok
ENSMALG00000013306	chd9	64	81.031	ENSOMEG00000015978	chd9	99	80.372	Oryzias_melastigma
ENSMALG00000013306	chd9	97	61.170	ENSOGAG00000002110	CHD9	84	69.877	Otolemur_garnettii
ENSMALG00000013306	chd9	73	62.067	ENSOARG00000017664	CHD9	79	69.873	Ovis_aries
ENSMALG00000013306	chd9	56	74.067	ENSPPAG00000039388	-	96	69.406	Pan_paniscus
ENSMALG00000013306	chd9	73	62.421	ENSPPRG00000004801	CHD9	97	61.449	Panthera_pardus
ENSMALG00000013306	chd9	73	61.151	ENSPTIG00000021854	CHD9	97	60.492	Panthera_tigris_altaica
ENSMALG00000013306	chd9	73	62.432	ENSPTRG00000008113	CHD9	92	64.360	Pan_troglodytes
ENSMALG00000013306	chd9	73	62.757	ENSPANG00000019307	CHD9	95	70.156	Papio_anubis
ENSMALG00000013306	chd9	96	67.036	ENSPKIG00000021876	chd9	94	77.205	Paramormyrops_kingsleyae
ENSMALG00000013306	chd9	87	73.019	ENSPKIG00000025401	-	66	75.516	Paramormyrops_kingsleyae
ENSMALG00000013306	chd9	64	62.809	ENSPSIG00000008099	CHD9	71	77.794	Pelodiscus_sinensis
ENSMALG00000013306	chd9	87	63.146	ENSPCIG00000017215	CHD9	91	76.613	Phascolarctos_cinereus
ENSMALG00000013306	chd9	99	78.683	ENSPFOG00000015839	chd9	99	77.995	Poecilia_formosa
ENSMALG00000013306	chd9	99	78.730	ENSPLAG00000011118	chd9	97	86.436	Poecilia_latipinna
ENSMALG00000013306	chd9	99	79.817	ENSPMEG00000015106	chd9	99	79.829	Poecilia_mexicana
ENSMALG00000013306	chd9	97	81.116	ENSPREG00000006473	chd9	97	85.609	Poecilia_reticulata
ENSMALG00000013306	chd9	73	62.620	ENSPPYG00000007348	CHD9	80	69.987	Pongo_abelii
ENSMALG00000013306	chd9	72	79.800	ENSPCAG00000007564	CHD9	73	81.981	Procavia_capensis
ENSMALG00000013306	chd9	94	60.237	ENSPCOG00000028433	CHD9	91	63.668	Propithecus_coquereli
ENSMALG00000013306	chd9	81	58.986	ENSPVAG00000015617	CHD9	81	73.419	Pteropus_vampyrus
ENSMALG00000013306	chd9	99	83.825	ENSPNYG00000010947	chd9	98	88.515	Pundamilia_nyererei
ENSMALG00000013306	chd9	97	71.738	ENSPNAG00000024141	chd9	96	78.103	Pygocentrus_nattereri
ENSMALG00000013306	chd9	73	60.329	ENSRNOG00000049302	Chd9	76	81.681	Rattus_norvegicus
ENSMALG00000013306	chd9	57	73.835	ENSRBIG00000035553	CHD9	96	70.029	Rhinopithecus_bieti
ENSMALG00000013306	chd9	56	75.291	ENSRROG00000033278	CHD9	96	70.252	Rhinopithecus_roxellana
ENSMALG00000013306	chd9	73	62.426	ENSSBOG00000030240	CHD9	92	64.014	Saimiri_boliviensis_boliviensis
ENSMALG00000013306	chd9	99	61.191	ENSSHAG00000002719	CHD9	79	70.093	Sarcophilus_harrisii
ENSMALG00000013306	chd9	99	65.832	ENSSFOG00015001327	chd9	95	74.660	Scleropages_formosus
ENSMALG00000013306	chd9	97	69.797	ENSSFOG00015020209	chd9	96	77.419	Scleropages_formosus
ENSMALG00000013306	chd9	99	84.739	ENSSMAG00000008953	chd9	97	88.529	Scophthalmus_maximus
ENSMALG00000013306	chd9	99	86.445	ENSSDUG00000006139	chd9	97	89.761	Seriola_dumerili
ENSMALG00000013306	chd9	99	85.232	ENSSLDG00000017818	chd9	97	90.160	Seriola_lalandi_dorsalis
ENSMALG00000013306	chd9	70	76.158	ENSSARG00000010632	CHD9	55	76.243	Sorex_araneus
ENSMALG00000013306	chd9	99	86.256	ENSSPAG00000021649	chd9	98	88.979	Stegastes_partitus
ENSMALG00000013306	chd9	99	59.893	ENSSSCG00000033591	CHD9	61	75.121	Sus_scrofa
ENSMALG00000013306	chd9	73	63.487	ENSTGUG00000007476	CHD9	80	73.534	Taeniopygia_guttata
ENSMALG00000013306	chd9	99	81.278	ENSTRUG00000009125	chd9	99	81.115	Takifugu_rubripes
ENSMALG00000013306	chd9	65	71.005	ENSTNIG00000003825	chd9	97	71.005	Tetraodon_nigroviridis
ENSMALG00000013306	chd9	51	94.828	ENSTBEG00000016052	-	64	74.100	Tupaia_belangeri
ENSMALG00000013306	chd9	86	62.143	ENSTTRG00000012674	CHD9	72	70.771	Tursiops_truncatus
ENSMALG00000013306	chd9	63	86.211	ENSUMAG00000004043	CHD9	94	86.575	Ursus_maritimus
ENSMALG00000013306	chd9	71	74.238	ENSVPAG00000001374	CHD9	81	68.606	Vicugna_pacos
ENSMALG00000013306	chd9	73	62.149	ENSVVUG00000019435	CHD9	79	70.283	Vulpes_vulpes
ENSMALG00000013306	chd9	99	59.026	ENSXETG00000000349	chd9	80	74.260	Xenopus_tropicalis
ENSMALG00000013306	chd9	82	87.023	ENSXCOG00000012997	chd9	97	86.899	Xiphophorus_couchianus
ENSMALG00000013306	chd9	99	80.638	ENSXMAG00000016192	chd9	99	86.401	Xiphophorus_maculatus