EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000013317 (Gene tree)
Gene ID: 109970825
Gene Symbol: chd1
Alias: fc26h11|fk85d05|si:dkey-106m21.4|wu:fc26h11|wu:fk85d05|zgc:173506
Full Name: chromodomain helicase DNA binding protein 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 29852 bases
Position: chrKV884897.1:100735-130586
Accession: 109970825
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000019107	ResIII	PF04851.15	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000019488	-	4278	XM_020618664	ENSMALP00000019107	1425 (aa)	XP_020474320	-

Gene Model

Click here to download ENSMALG00000013317's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000013317's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000013317	chd1	83	62.719	ENSMALG00000007755	chd2	72	61.931

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000013317	chd1	95	78.072	ENSG00000153922	CHD1	79	78.267	Homo_sapiens
ENSMALG00000013317	chd1	81	93.133	ENSAPOG00000005764	chd1	98	93.133	Acanthochromis_polyacanthus
ENSMALG00000013317	chd1	86	92.985	ENSAOCG00000023105	chd1	77	92.985	Amphiprion_ocellaris
ENSMALG00000013317	chd1	86	94.458	ENSAPEG00000013544	chd1	77	94.458	Amphiprion_percula
ENSMALG00000013317	chd1	99	83.100	ENSATEG00000010676	chd1	84	88.850	Anabas_testudineus
ENSMALG00000013317	chd1	85	87.264	ENSAMXG00000010843	chd1	93	87.264	Astyanax_mexicanus
ENSMALG00000013317	chd1	95	77.974	ENSCATG00000032035	CHD1	80	78.561	Cercocebus_atys
ENSMALG00000013317	chd1	95	77.974	ENSCSAG00000015339	CHD1	79	78.561	Chlorocebus_sabaeus
ENSMALG00000013317	chd1	95	75.806	ENSCANG00000036916	CHD1	79	76.488	Colobus_angolensis_palliatus
ENSMALG00000013317	chd1	95	77.493	ENSCGRG00001023943	Chd1	79	77.713	Cricetulus_griseus_chok1gshd
ENSMALG00000013317	chd1	95	77.493	ENSCGRG00000008652	Chd1	79	77.713	Cricetulus_griseus_crigri
ENSMALG00000013317	chd1	86	90.531	ENSCSEG00000009553	chd1	77	90.531	Cynoglossus_semilaevis
ENSMALG00000013317	chd1	95	78.462	ENSEASG00005016110	CHD1	97	78.363	Equus_asinus_asinus
ENSMALG00000013317	chd1	86	87.267	ENSELUG00000017677	chd1	75	87.267	Esox_lucius
ENSMALG00000013317	chd1	92	85.562	ENSFHEG00000021164	chd1	90	90.325	Fundulus_heteroclitus
ENSMALG00000013317	chd1	95	83.666	ENSGMOG00000001537	chd1	77	83.333	Gadus_morhua
ENSMALG00000013317	chd1	89	79.670	ENSGALG00000031327	-	76	80.702	Gallus_gallus
ENSMALG00000013317	chd1	92	91.908	ENSGAFG00000019880	chd1	84	91.908	Gambusia_affinis
ENSMALG00000013317	chd1	95	74.175	ENSGGOG00000011463	CHD1	79	74.231	Gorilla_gorilla
ENSMALG00000013317	chd1	86	92.345	ENSHCOG00000014222	chd1	76	92.345	Hippocampus_comes
ENSMALG00000013317	chd1	84	89.408	ENSIPUG00000001369	chd1	77	88.446	Ictalurus_punctatus
ENSMALG00000013317	chd1	71	76.696	ENSLAFG00000023183	CHD1	94	76.931	Loxodonta_africana
ENSMALG00000013317	chd1	95	77.974	ENSMFAG00000031226	CHD1	79	78.561	Macaca_fascicularis
ENSMALG00000013317	chd1	95	77.990	ENSMMUG00000014090	CHD1	95	78.462	Macaca_mulatta
ENSMALG00000013317	chd1	95	78.430	ENSMNEG00000045073	CHD1	79	78.634	Macaca_nemestrina
ENSMALG00000013317	chd1	95	72.794	ENSMLEG00000041096	CHD1	78	73.495	Mandrillus_leucophaeus
ENSMALG00000013317	chd1	87	92.042	ENSMZEG00005010957	chd1	92	92.921	Maylandia_zebra
ENSMALG00000013317	chd1	92	78.208	ENSMOCG00000019121	Chd1	78	78.056	Microtus_ochrogaster
ENSMALG00000013317	chd1	53	82.058	ENSMODG00000019266	-	96	83.924	Monodelphis_domestica
ENSMALG00000013317	chd1	95	77.859	MGP_CAROLIEiJ_G0021099	Chd1	93	78.942	Mus_caroli
ENSMALG00000013317	chd1	95	77.493	ENSMUSG00000023852	Chd1	93	78.844	Mus_musculus
ENSMALG00000013317	chd1	95	77.183	MGP_PahariEiJ_G0023414	Chd1	94	78.963	Mus_pahari
ENSMALG00000013317	chd1	83	93.445	ENSNBRG00000006860	chd1	75	93.529	Neolamprologus_brichardi
ENSMALG00000013317	chd1	95	78.219	ENSNLEG00000014493	CHD1	79	78.267	Nomascus_leucogenys
ENSMALG00000013317	chd1	95	77.591	ENSOANG00000004891	CHD1	75	84.170	Ornithorhynchus_anatinus
ENSMALG00000013317	chd1	71	85.361	ENSORLG00015016725	chd1	95	85.686	Oryzias_latipes_hsok
ENSMALG00000013317	chd1	95	76.957	ENSPPAG00000043367	CHD1	80	76.991	Pan_paniscus
ENSMALG00000013317	chd1	95	78.146	ENSPTRG00000017103	CHD1	79	78.194	Pan_troglodytes
ENSMALG00000013317	chd1	95	77.974	ENSPANG00000006387	CHD1	79	78.561	Papio_anubis
ENSMALG00000013317	chd1	89	79.919	ENSPKIG00000024719	chd1	76	79.204	Paramormyrops_kingsleyae
ENSMALG00000013317	chd1	88	90.248	ENSPMGG00000005785	chd1	93	90.120	Periophthalmus_magnuspinnatus
ENSMALG00000013317	chd1	94	78.097	ENSPEMG00000015939	Chd1	79	78.508	Peromyscus_maniculatus_bairdii
ENSMALG00000013317	chd1	59	86.223	ENSPLAG00000006473	-	85	87.544	Poecilia_latipinna
ENSMALG00000013317	chd1	95	86.819	ENSPREG00000004209	chd1	81	87.776	Poecilia_reticulata
ENSMALG00000013317	chd1	95	77.476	ENSRNOG00000014434	Chd1	95	77.266	Rattus_norvegicus
ENSMALG00000013317	chd1	93	78.212	ENSRBIG00000044325	CHD1	79	78.631	Rhinopithecus_bieti
ENSMALG00000013317	chd1	95	78.388	ENSRROG00000001726	CHD1	80	78.855	Rhinopithecus_roxellana
ENSMALG00000013317	chd1	88	83.946	ENSSFOG00015007161	chd1	90	85.471	Scleropages_formosus
ENSMALG00000013317	chd1	95	93.461	ENSSDUG00000018314	chd1	95	93.608	Seriola_dumerili
ENSMALG00000013317	chd1	64	90.360	ENSSLDG00000017244	chd1	88	95.682	Seriola_lalandi_dorsalis
ENSMALG00000013317	chd1	95	92.873	ENSSPAG00000007024	chd1	95	93.162	Stegastes_partitus
ENSMALG00000013317	chd1	95	77.753	ENSSSCG00000014177	CHD1	91	78.430	Sus_scrofa
ENSMALG00000013317	chd1	95	86.115	ENSTRUG00000010282	chd1	79	86.854	Takifugu_rubripes
ENSMALG00000013317	chd1	86	87.531	ENSTNIG00000007101	chd1	95	88.690	Tetraodon_nigroviridis
ENSMALG00000013317	chd1	95	82.794	ENSXCOG00000017184	chd1	81	82.743	Xiphophorus_couchianus
ENSMALG00000013317	chd1	93	87.208	ENSXMAG00000014538	chd1	96	88.271	Xiphophorus_maculatus