EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000013363 (Gene tree)
Gene ID: 109957518
Gene Symbol: polr1a
Alias: fa26a03|sb:cb935|wu:fa26a03
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 41597 bases
Position: chrKV884715.1:2977248-3018844
Accession: 109957518
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000019229	RNA_pol_Rpb1_5	PF04998.17	9.6e-101	1	1
ENSMALP00000019217	RNA_pol_Rpb1_5	PF04998.17	1.1e-100	1	1
ENSMALP00000019146	RNA_pol_Rpb1_5	PF04998.17	1.1e-100	1	1
ENSMALP00000019229	RNA_pol_Rpb1_4	PF05000.17	1.8e-21	1	1
ENSMALP00000019146	RNA_pol_Rpb1_4	PF05000.17	2e-21	1	1
ENSMALP00000019217	RNA_pol_Rpb1_4	PF05000.17	2.4e-21	1	1
ENSMALP00000019229	RNA_pol_Rpb1_2	PF00623.20	7.8e-69	1	1
ENSMALP00000019217	RNA_pol_Rpb1_2	PF00623.20	8.5e-69	1	1
ENSMALP00000019146	RNA_pol_Rpb1_2	PF00623.20	8.8e-69	1	1
ENSMALP00000019229	RNA_pol_Rpb1_3	PF04983.18	9.4e-37	1	1
ENSMALP00000019217	RNA_pol_Rpb1_3	PF04983.18	1.1e-36	1	1
ENSMALP00000019146	RNA_pol_Rpb1_3	PF04983.18	1.1e-36	1	1
ENSMALP00000019146	RNA_pol_Rpb1_1	PF04997.12	2e-20	1	1
ENSMALP00000019217	RNA_pol_Rpb1_1	PF04997.12	1.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000019600	-	4878	-	ENSMALP00000019217	1625 (aa)	-	-
ENSMALT00000019529	-	8329	XM_020595446	ENSMALP00000019146	1683 (aa)	XP_020451102	UPI0009B3E9AB
ENSMALT00000019612	-	8445	-	ENSMALP00000019229	1575 (aa)	-	-

Gene Model

Click here to download ENSMALG00000013363's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000013363's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000013363	polr1a	71	31.867	ENSMALG00000008716	polr2a	61	32.082
ENSMALG00000013363	polr1a	66	32.597	ENSMALG00000001249	polr3a	68	32.707

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000013363	polr1a	100	66.030	ENSG00000068654	POLR1A	97	76.410	Homo_sapiens
ENSMALG00000013363	polr1a	69	87.245	ENSAPOG00000017945	polr1a	99	87.245	Acanthochromis_polyacanthus
ENSMALG00000013363	polr1a	100	66.164	ENSAMEG00000005807	POLR1A	100	70.113	Ailuropoda_melanoleuca
ENSMALG00000013363	polr1a	100	82.457	ENSACIG00000022147	polr1a	100	82.468	Amphilophus_citrinellus
ENSMALG00000013363	polr1a	100	85.815	ENSAOCG00000017336	polr1a	100	86.705	Amphiprion_ocellaris
ENSMALG00000013363	polr1a	100	85.697	ENSAPEG00000016105	polr1a	98	90.278	Amphiprion_percula
ENSMALG00000013363	polr1a	100	88.260	ENSATEG00000016773	polr1a	100	87.780	Anabas_testudineus
ENSMALG00000013363	polr1a	91	66.893	ENSAPLG00000013871	POLR1A	99	67.418	Anas_platyrhynchos
ENSMALG00000013363	polr1a	99	64.606	ENSACAG00000012141	POLR1A	99	64.452	Anolis_carolinensis
ENSMALG00000013363	polr1a	100	64.624	ENSANAG00000033927	POLR1A	100	65.081	Aotus_nancymaae
ENSMALG00000013363	polr1a	100	80.473	ENSACLG00000020541	polr1a	100	79.794	Astatotilapia_calliptera
ENSMALG00000013363	polr1a	100	65.225	ENSBTAG00000006481	POLR1A	100	65.429	Bos_taurus
ENSMALG00000013363	polr1a	99	38.182	WBGene00012999	rpoa-1	98	38.264	Caenorhabditis_elegans
ENSMALG00000013363	polr1a	100	65.238	ENSCJAG00000019547	POLR1A	100	65.273	Callithrix_jacchus
ENSMALG00000013363	polr1a	100	65.878	ENSCAFG00000007613	POLR1A	100	66.164	Canis_familiaris
ENSMALG00000013363	polr1a	100	65.962	ENSCAFG00020014752	POLR1A	100	66.010	Canis_lupus_dingo
ENSMALG00000013363	polr1a	100	65.043	ENSCHIG00000018204	POLR1A	100	64.713	Capra_hircus
ENSMALG00000013363	polr1a	100	64.986	ENSTSYG00000002761	POLR1A	83	66.410	Carlito_syrichta
ENSMALG00000013363	polr1a	100	61.491	ENSCAPG00000010132	POLR1A	99	62.718	Cavia_aperea
ENSMALG00000013363	polr1a	100	65.389	ENSCPOG00000012350	POLR1A	100	65.754	Cavia_porcellus
ENSMALG00000013363	polr1a	100	65.414	ENSCCAG00000019839	POLR1A	100	65.429	Cebus_capucinus
ENSMALG00000013363	polr1a	100	65.227	ENSCATG00000029786	POLR1A	100	65.991	Cercocebus_atys
ENSMALG00000013363	polr1a	100	65.014	ENSCLAG00000005187	POLR1A	100	65.159	Chinchilla_lanigera
ENSMALG00000013363	polr1a	100	65.400	ENSCSAG00000016251	POLR1A	100	65.933	Chlorocebus_sabaeus
ENSMALG00000013363	polr1a	99	66.842	ENSCPBG00000001115	POLR1A	99	66.647	Chrysemys_picta_bellii
ENSMALG00000013363	polr1a	96	57.161	ENSCSAVG00000007184	-	93	57.161	Ciona_savignyi
ENSMALG00000013363	polr1a	100	63.341	ENSCANG00000031785	POLR1A	100	63.167	Colobus_angolensis_palliatus
ENSMALG00000013363	polr1a	96	66.508	ENSCGRG00001006651	Polr1a	100	66.508	Cricetulus_griseus_chok1gshd
ENSMALG00000013363	polr1a	64	63.107	ENSCGRG00000010834	Polr1a	100	63.107	Cricetulus_griseus_crigri
ENSMALG00000013363	polr1a	94	84.028	ENSCSEG00000020190	polr1a	100	77.412	Cynoglossus_semilaevis
ENSMALG00000013363	polr1a	100	80.283	ENSCVAG00000020941	polr1a	100	80.271	Cyprinodon_variegatus
ENSMALG00000013363	polr1a	100	72.780	ENSDARG00000098375	polr1a	100	72.371	Danio_rerio
ENSMALG00000013363	polr1a	100	62.905	ENSDNOG00000010829	POLR1A	100	62.847	Dasypus_novemcinctus
ENSMALG00000013363	polr1a	100	65.177	ENSDORG00000008298	Polr1a	100	64.921	Dipodomys_ordii
ENSMALG00000013363	polr1a	79	44.930	FBgn0019938	RpI1	99	42.966	Drosophila_melanogaster
ENSMALG00000013363	polr1a	72	90.625	ENSETEG00000000412	-	71	90.625	Echinops_telfairi
ENSMALG00000013363	polr1a	95	48.000	ENSEBUG00000005667	-	99	47.135	Eptatretus_burgeri
ENSMALG00000013363	polr1a	100	65.587	ENSEASG00005001625	POLR1A	100	65.603	Equus_asinus_asinus
ENSMALG00000013363	polr1a	100	65.703	ENSECAG00000030510	-	99	70.656	Equus_caballus
ENSMALG00000013363	polr1a	100	65.703	ENSECAG00000036306	-	99	70.656	Equus_caballus
ENSMALG00000013363	polr1a	100	65.703	ENSECAG00000010092	POLR1A	99	70.656	Equus_caballus
ENSMALG00000013363	polr1a	85	76.725	ENSEEUG00000000676	POLR1A	84	77.428	Erinaceus_europaeus
ENSMALG00000013363	polr1a	100	73.923	ENSELUG00000012769	polr1a	99	74.065	Esox_lucius
ENSMALG00000013363	polr1a	100	65.549	ENSFCAG00000008966	POLR1A	100	65.719	Felis_catus
ENSMALG00000013363	polr1a	99	64.415	ENSFALG00000010082	POLR1A	99	65.394	Ficedula_albicollis
ENSMALG00000013363	polr1a	100	65.147	ENSFDAG00000013726	POLR1A	100	65.369	Fukomys_damarensis
ENSMALG00000013363	polr1a	100	77.273	ENSFHEG00000005996	polr1a	100	76.171	Fundulus_heteroclitus
ENSMALG00000013363	polr1a	100	70.556	ENSGMOG00000002230	polr1a	100	70.201	Gadus_morhua
ENSMALG00000013363	polr1a	89	63.301	ENSGALG00000038160	-	98	63.400	Gallus_gallus
ENSMALG00000013363	polr1a	100	79.740	ENSGAFG00000015266	polr1a	100	79.622	Gambusia_affinis
ENSMALG00000013363	polr1a	100	81.206	ENSGACG00000018791	polr1a	100	80.742	Gasterosteus_aculeatus
ENSMALG00000013363	polr1a	95	67.911	ENSGAGG00000004984	-	95	73.290	Gopherus_agassizii
ENSMALG00000013363	polr1a	100	65.875	ENSGGOG00000001788	POLR1A	100	65.875	Gorilla_gorilla
ENSMALG00000013363	polr1a	89	82.679	ENSHBUG00000020021	polr1a	97	84.314	Haplochromis_burtoni
ENSMALG00000013363	polr1a	100	65.152	ENSHGLG00000006334	POLR1A	100	65.601	Heterocephalus_glaber_female
ENSMALG00000013363	polr1a	100	64.966	ENSHGLG00100006614	POLR1A	100	65.411	Heterocephalus_glaber_male
ENSMALG00000013363	polr1a	100	78.489	ENSHCOG00000003345	polr1a	100	77.879	Hippocampus_comes
ENSMALG00000013363	polr1a	100	71.771	ENSIPUG00000013174	polr1a	100	71.596	Ictalurus_punctatus
ENSMALG00000013363	polr1a	100	65.313	ENSSTOG00000012580	POLR1A	100	65.465	Ictidomys_tridecemlineatus
ENSMALG00000013363	polr1a	100	65.641	ENSJJAG00000013113	Polr1a	100	65.990	Jaculus_jaculus
ENSMALG00000013363	polr1a	100	84.675	ENSKMAG00000007399	polr1a	100	84.438	Kryptolebias_marmoratus
ENSMALG00000013363	polr1a	100	82.815	ENSLBEG00000015401	polr1a	99	87.009	Labrus_bergylta
ENSMALG00000013363	polr1a	53	70.915	ENSLACG00000003218	polr1a	100	70.915	Latimeria_chalumnae
ENSMALG00000013363	polr1a	100	70.889	ENSLOCG00000010881	polr1a	100	71.007	Lepisosteus_oculatus
ENSMALG00000013363	polr1a	100	65.820	ENSLAFG00000014948	POLR1A	100	65.665	Loxodonta_africana
ENSMALG00000013363	polr1a	100	65.112	ENSMFAG00000046097	POLR1A	100	65.875	Macaca_fascicularis
ENSMALG00000013363	polr1a	100	64.997	ENSMMUG00000015815	POLR1A	100	65.759	Macaca_mulatta
ENSMALG00000013363	polr1a	100	65.112	ENSMNEG00000043313	POLR1A	100	65.875	Macaca_nemestrina
ENSMALG00000013363	polr1a	100	65.210	ENSMLEG00000042428	POLR1A	100	65.683	Mandrillus_leucophaeus
ENSMALG00000013363	polr1a	100	87.122	ENSMAMG00000016565	polr1a	100	86.706	Mastacembelus_armatus
ENSMALG00000013363	polr1a	100	85.841	ENSMZEG00005004915	polr1a	100	85.015	Maylandia_zebra
ENSMALG00000013363	polr1a	99	62.929	ENSMGAG00000013111	POLR1A	99	62.929	Meleagris_gallopavo
ENSMALG00000013363	polr1a	98	64.851	ENSMAUG00000008497	Polr1a	100	64.956	Mesocricetus_auratus
ENSMALG00000013363	polr1a	100	65.152	ENSMICG00000000757	POLR1A	100	65.643	Microcebus_murinus
ENSMALG00000013363	polr1a	100	65.119	ENSMOCG00000000122	Polr1a	100	65.621	Microtus_ochrogaster
ENSMALG00000013363	polr1a	100	81.545	ENSMMOG00000010216	polr1a	100	81.593	Mola_mola
ENSMALG00000013363	polr1a	100	61.525	ENSMODG00000009335	POLR1A	100	61.667	Monodelphis_domestica
ENSMALG00000013363	polr1a	100	64.294	MGP_CAROLIEiJ_G0028494	Polr1a	100	64.447	Mus_caroli
ENSMALG00000013363	polr1a	100	64.327	ENSMUSG00000049553	Polr1a	100	64.406	Mus_musculus
ENSMALG00000013363	polr1a	100	65.067	MGP_PahariEiJ_G0022230	Polr1a	100	64.965	Mus_pahari
ENSMALG00000013363	polr1a	100	63.095	MGP_SPRETEiJ_G0029499	Polr1a	100	59.467	Mus_spretus
ENSMALG00000013363	polr1a	100	65.896	ENSMPUG00000009135	POLR1A	100	65.679	Mustela_putorius_furo
ENSMALG00000013363	polr1a	100	65.263	ENSMLUG00000015723	POLR1A	100	65.551	Myotis_lucifugus
ENSMALG00000013363	polr1a	100	64.733	ENSNGAG00000017907	Polr1a	100	65.293	Nannospalax_galili
ENSMALG00000013363	polr1a	100	85.664	ENSNBRG00000000519	polr1a	100	85.015	Neolamprologus_brichardi
ENSMALG00000013363	polr1a	100	63.381	ENSNLEG00000002264	POLR1A	100	64.014	Nomascus_leucogenys
ENSMALG00000013363	polr1a	75	85.039	ENSMEUG00000011665	-	75	85.039	Notamacropus_eugenii
ENSMALG00000013363	polr1a	95	71.277	ENSOPRG00000008269	POLR1A	94	71.277	Ochotona_princeps
ENSMALG00000013363	polr1a	100	65.197	ENSODEG00000003542	POLR1A	100	65.525	Octodon_degus
ENSMALG00000013363	polr1a	100	85.346	ENSONIG00000015895	polr1a	100	85.404	Oreochromis_niloticus
ENSMALG00000013363	polr1a	100	64.503	ENSOCUG00000010138	POLR1A	100	65.563	Oryctolagus_cuniculus
ENSMALG00000013363	polr1a	100	81.180	ENSORLG00000008753	polr1a	99	81.062	Oryzias_latipes
ENSMALG00000013363	polr1a	100	77.752	ENSORLG00020020726	polr1a	99	77.621	Oryzias_latipes_hni
ENSMALG00000013363	polr1a	95	88.298	ENSORLG00015016071	polr1a	98	88.298	Oryzias_latipes_hsok
ENSMALG00000013363	polr1a	100	65.260	ENSOGAG00000004031	POLR1A	100	65.411	Otolemur_garnettii
ENSMALG00000013363	polr1a	100	65.533	ENSOARG00000020601	POLR1A	100	63.951	Ovis_aries
ENSMALG00000013363	polr1a	100	65.856	ENSPPAG00000042450	POLR1A	100	65.856	Pan_paniscus
ENSMALG00000013363	polr1a	100	65.780	ENSPPRG00000006702	POLR1A	100	65.777	Panthera_pardus
ENSMALG00000013363	polr1a	100	65.380	ENSPTIG00000018783	POLR1A	100	65.376	Panthera_tigris_altaica
ENSMALG00000013363	polr1a	100	65.152	ENSPTRG00000012147	POLR1A	100	65.972	Pan_troglodytes
ENSMALG00000013363	polr1a	100	65.055	ENSPANG00000025908	POLR1A	100	65.817	Papio_anubis
ENSMALG00000013363	polr1a	100	71.136	ENSPKIG00000005468	polr1a	98	74.126	Paramormyrops_kingsleyae
ENSMALG00000013363	polr1a	68	64.345	ENSPSIG00000009321	-	99	64.140	Pelodiscus_sinensis
ENSMALG00000013363	polr1a	55	81.868	ENSPMGG00000009718	polr1a	95	81.868	Periophthalmus_magnuspinnatus
ENSMALG00000013363	polr1a	100	65.081	ENSPEMG00000022224	Polr1a	100	65.177	Peromyscus_maniculatus_bairdii
ENSMALG00000013363	polr1a	95	64.555	ENSPCIG00000004222	POLR1A	99	64.434	Phascolarctos_cinereus
ENSMALG00000013363	polr1a	100	80.787	ENSPFOG00000005025	polr1a	100	80.762	Poecilia_formosa
ENSMALG00000013363	polr1a	100	80.997	ENSPLAG00000021389	polr1a	100	80.869	Poecilia_latipinna
ENSMALG00000013363	polr1a	100	77.641	ENSPMEG00000006463	polr1a	100	78.638	Poecilia_mexicana
ENSMALG00000013363	polr1a	100	81.067	ENSPREG00000002389	polr1a	100	80.877	Poecilia_reticulata
ENSMALG00000013363	polr1a	100	64.594	ENSPPYG00000012217	POLR1A	100	65.411	Pongo_abelii
ENSMALG00000013363	polr1a	100	55.302	ENSPCAG00000011582	POLR1A	95	55.781	Procavia_capensis
ENSMALG00000013363	polr1a	100	65.325	ENSPCOG00000026987	POLR1A	100	65.992	Propithecus_coquereli
ENSMALG00000013363	polr1a	95	65.103	ENSPVAG00000012674	POLR1A	95	65.396	Pteropus_vampyrus
ENSMALG00000013363	polr1a	100	85.782	ENSPNYG00000000026	polr1a	100	84.956	Pundamilia_nyererei
ENSMALG00000013363	polr1a	100	72.355	ENSPNAG00000019223	polr1a	100	72.005	Pygocentrus_nattereri
ENSMALG00000013363	polr1a	100	65.139	ENSRNOG00000009545	Polr1a	100	65.197	Rattus_norvegicus
ENSMALG00000013363	polr1a	100	64.824	ENSRBIG00000028335	POLR1A	100	65.741	Rhinopithecus_bieti
ENSMALG00000013363	polr1a	100	64.709	ENSRROG00000031473	POLR1A	100	65.741	Rhinopithecus_roxellana
ENSMALG00000013363	polr1a	94	43.846	YOR341W	RPA190	99	36.162	Saccharomyces_cerevisiae
ENSMALG00000013363	polr1a	100	64.890	ENSSBOG00000030262	POLR1A	100	65.255	Saimiri_boliviensis_boliviensis
ENSMALG00000013363	polr1a	96	69.930	ENSSHAG00000014739	POLR1A	92	69.930	Sarcophilus_harrisii
ENSMALG00000013363	polr1a	100	70.461	ENSSFOG00015019716	polr1a	100	70.169	Scleropages_formosus
ENSMALG00000013363	polr1a	100	85.664	ENSSMAG00000014342	polr1a	100	85.664	Scophthalmus_maximus
ENSMALG00000013363	polr1a	100	87.913	ENSSDUG00000014631	polr1a	100	88.090	Seriola_dumerili
ENSMALG00000013363	polr1a	100	84.552	ENSSLDG00000024095	polr1a	100	84.493	Seriola_lalandi_dorsalis
ENSMALG00000013363	polr1a	74	95.122	ENSSARG00000003136	-	71	95.122	Sorex_araneus
ENSMALG00000013363	polr1a	95	74.000	ENSSPUG00000004215	POLR1A	98	74.000	Sphenodon_punctatus
ENSMALG00000013363	polr1a	64	87.799	ENSSPAG00000016341	polr1a	94	87.799	Stegastes_partitus
ENSMALG00000013363	polr1a	83	66.667	ENSSSCG00000008226	POLR1A	99	66.573	Sus_scrofa
ENSMALG00000013363	polr1a	100	64.104	ENSTGUG00000010704	POLR1A	100	64.446	Taeniopygia_guttata
ENSMALG00000013363	polr1a	100	78.643	ENSTRUG00000002210	polr1a	99	78.736	Takifugu_rubripes
ENSMALG00000013363	polr1a	100	73.209	ENSTNIG00000010116	polr1a	100	73.151	Tetraodon_nigroviridis
ENSMALG00000013363	polr1a	74	84.071	ENSTBEG00000008646	POLR1A	74	84.071	Tupaia_belangeri
ENSMALG00000013363	polr1a	100	63.246	ENSTTRG00000008597	POLR1A	100	63.283	Tursiops_truncatus
ENSMALG00000013363	polr1a	74	65.992	ENSUAMG00000012158	-	94	65.852	Ursus_americanus
ENSMALG00000013363	polr1a	100	64.968	ENSUMAG00000006700	POLR1A	96	69.947	Ursus_maritimus
ENSMALG00000013363	polr1a	100	65.762	ENSVVUG00000001245	POLR1A	100	66.048	Vulpes_vulpes
ENSMALG00000013363	polr1a	100	62.371	ENSXETG00000001952	polr1a	99	63.725	Xenopus_tropicalis
ENSMALG00000013363	polr1a	100	81.503	ENSXMAG00000004032	polr1a	100	81.022	Xiphophorus_maculatus