EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000013384 (Gene tree)
Gene ID: 109951543
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein with serine-rich domain 1-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 6934 bases
Position: chrKV885083.1:191185-198118
Accession: 109951543
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000019175	RRM_1	PF00076.22	1.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000019558	-	780	XM_020586110	ENSMALP00000019175	259 (aa)	XP_020441766	-

Gene Model

Click here to download ENSMALG00000013384's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03013	RNA transport	KEGG
malb03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000013384's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000013384	-	78	58.852	ENSACIG00000014367	-	76	67.619	Amphilophus_citrinellus
ENSMALG00000013384	-	85	71.491	ENSAMXG00000006330	-	82	73.684	Astyanax_mexicanus
ENSMALG00000013384	-	52	72.388	ENSCATG00000042361	-	87	59.770	Cercocebus_atys
ENSMALG00000013384	-	87	65.833	ENSCSAG00000005219	-	80	65.417	Chlorocebus_sabaeus
ENSMALG00000013384	-	85	79.736	ENSCSEG00000000402	RNPS1	76	83.260	Cynoglossus_semilaevis
ENSMALG00000013384	-	78	68.599	ENSELUG00000015003	RNPS1	77	63.981	Esox_lucius
ENSMALG00000013384	-	85	83.710	ENSGACG00000005641	-	82	81.448	Gasterosteus_aculeatus
ENSMALG00000013384	-	55	74.825	ENSHGLG00100015267	-	78	61.468	Heterocephalus_glaber_male
ENSMALG00000013384	-	85	52.066	ENSHGLG00100017879	-	80	51.754	Heterocephalus_glaber_male
ENSMALG00000013384	-	93	60.159	ENSHGLG00100001721	-	85	60.159	Heterocephalus_glaber_male
ENSMALG00000013384	-	51	72.932	ENSJJAG00000000532	-	53	76.147	Jaculus_jaculus
ENSMALG00000013384	-	93	57.312	ENSMFAG00000044121	-	91	58.233	Macaca_fascicularis
ENSMALG00000013384	-	53	71.739	ENSMMUG00000041726	-	91	59.387	Macaca_mulatta
ENSMALG00000013384	-	53	71.739	ENSMNEG00000024827	-	91	59.387	Macaca_nemestrina
ENSMALG00000013384	-	75	59.420	ENSMLEG00000040232	-	80	59.903	Mandrillus_leucophaeus
ENSMALG00000013384	-	86	82.533	ENSMAMG00000021148	-	81	86.404	Mastacembelus_armatus
ENSMALG00000013384	-	78	56.731	ENSMMOG00000010863	RNPS1	77	67.136	Mola_mola
ENSMALG00000013384	-	83	78.378	ENSMMOG00000004680	-	77	76.852	Mola_mola
ENSMALG00000013384	-	78	57.488	ENSNBRG00000023437	RNPS1	75	68.421	Neolamprologus_brichardi
ENSMALG00000013384	-	51	73.684	ENSNLEG00000009243	RNPS1	87	64.679	Nomascus_leucogenys
ENSMALG00000013384	-	51	72.519	ENSPPAG00000011845	RNPS1	89	58.403	Pan_paniscus
ENSMALG00000013384	-	58	67.550	ENSPTIG00000015643	RNPS1	57	79.817	Panthera_tigris_altaica
ENSMALG00000013384	-	58	69.536	ENSPCIG00000016114	-	53	78.899	Phascolarctos_cinereus
ENSMALG00000013384	-	67	65.537	ENSPNYG00000006233	-	80	64.407	Pundamilia_nyererei
ENSMALG00000013384	-	85	74.561	ENSPNAG00000025479	RNPS1	82	75.877	Pygocentrus_nattereri
ENSMALG00000013384	-	85	65.532	ENSSFOG00015022746	RNPS1	85	59.149	Scleropages_formosus
ENSMALG00000013384	-	89	68.050	ENSSFOG00015019341	-	76	70.539	Scleropages_formosus
ENSMALG00000013384	-	51	77.444	ENSTBEG00000009098	RNPS1	96	63.359	Tupaia_belangeri