EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000013392 (Gene tree)
Gene ID: 109958645
Gene Symbol: srsf4
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 4-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 5678 bases
Position: chrKV884722.1:5260217-5265894
Accession: 109958645
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000019257	RRM_1	PF00076.22	1.8e-31	1	2
ENSMALP00000019257	RRM_1	PF00076.22	1.8e-31	2	2
ENSMALP00000019228	RRM_1	PF00076.22	4.8e-31	1	2
ENSMALP00000019228	RRM_1	PF00076.22	4.8e-31	2	2
ENSMALP00000019272	RRM_1	PF00076.22	1.1e-29	1	2
ENSMALP00000019272	RRM_1	PF00076.22	1.1e-29	2	2
ENSMALP00000019237	RRM_1	PF00076.22	6.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000019640	-	789	-	ENSMALP00000019257	262 (aa)	-	-
ENSMALT00000019656	-	1038	XM_020597480	ENSMALP00000019272	346 (aa)	XP_020453136	-
ENSMALT00000019611	-	1083	-	ENSMALP00000019228	360 (aa)	-	-
ENSMALT00000019620	-	846	-	ENSMALP00000019237	281 (aa)	-	-

Gene Model

Click here to download ENSMALG00000013392's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG
malb05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000013392's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000013392	srsf4	65	67.647	ENSMALG00000021194	srsf5a	62	68.047
ENSMALG00000013392	srsf4	60	38.650	ENSMALG00000007763	-	64	43.293
ENSMALG00000013392	srsf4	61	45.783	ENSMALG00000017129	-	64	47.590
ENSMALG00000013392	srsf4	64	63.536	ENSMALG00000021875	srsf5b	82	62.500
ENSMALG00000013392	srsf4	65	40.556	ENSMALG00000011678	srsf9	74	43.229

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000013392	srsf4	66	86.441	ENSG00000116350	SRSF4	69	80.645	Homo_sapiens
ENSMALG00000013392	srsf4	66	75.556	ENSAPOG00000023399	-	91	52.581	Acanthochromis_polyacanthus
ENSMALG00000013392	srsf4	82	95.588	ENSAPOG00000020244	srsf4	94	80.747	Acanthochromis_polyacanthus
ENSMALG00000013392	srsf4	88	85.621	ENSACIG00000018649	srsf4	94	94.118	Amphilophus_citrinellus
ENSMALG00000013392	srsf4	60	89.375	ENSAOCG00000005997	srsf4	92	93.827	Amphiprion_ocellaris
ENSMALG00000013392	srsf4	74	70.115	ENSAPEG00000020826	srsf4	83	79.615	Amphiprion_percula
ENSMALG00000013392	srsf4	87	84.274	ENSATEG00000005680	srsf4	88	79.259	Anabas_testudineus
ENSMALG00000013392	srsf4	77	86.765	ENSANAG00000037134	SRSF4	62	70.703	Aotus_nancymaae
ENSMALG00000013392	srsf4	78	95.588	ENSACLG00000003395	srsf4	93	94.118	Astatotilapia_calliptera
ENSMALG00000013392	srsf4	66	75.275	ENSACLG00000021269	-	61	70.455	Astatotilapia_calliptera
ENSMALG00000013392	srsf4	82	79.545	ENSAMXG00000034811	srsf4	98	72.400	Astyanax_mexicanus
ENSMALG00000013392	srsf4	66	86.441	ENSBTAG00000013309	SRSF4	52	70.703	Bos_taurus
ENSMALG00000013392	srsf4	65	51.256	WBGene00004698	rsp-1	97	53.741	Caenorhabditis_elegans
ENSMALG00000013392	srsf4	86	70.866	ENSCHIG00000022096	SRSF4	54	71.364	Capra_hircus
ENSMALG00000013392	srsf4	66	86.441	ENSCSAG00000001022	SRSF4	52	70.703	Chlorocebus_sabaeus
ENSMALG00000013392	srsf4	65	60.500	ENSCING00000012370	-	80	61.702	Ciona_intestinalis
ENSMALG00000013392	srsf4	65	54.124	ENSCING00000024718	-	57	57.436	Ciona_intestinalis
ENSMALG00000013392	srsf4	66	59.278	ENSCING00000020631	-	80	61.856	Ciona_intestinalis
ENSMALG00000013392	srsf4	65	56.989	ENSCING00000011362	-	65	58.378	Ciona_intestinalis
ENSMALG00000013392	srsf4	65	65.537	ENSCSAVG00000002581	-	70	63.636	Ciona_savignyi
ENSMALG00000013392	srsf4	66	86.441	ENSCANG00000028667	SRSF4	52	70.703	Colobus_angolensis_palliatus
ENSMALG00000013392	srsf4	65	94.203	ENSCSEG00000010058	srsf4	75	91.736	Cynoglossus_semilaevis
ENSMALG00000013392	srsf4	83	55.645	ENSCVAG00000004342	srsf4	74	98.113	Cyprinodon_variegatus
ENSMALG00000013392	srsf4	91	85.915	ENSDARG00000105293	srsf4	81	88.372	Danio_rerio
ENSMALG00000013392	srsf4	66	85.876	ENSDORG00000002459	Srsf4	53	85.507	Dipodomys_ordii
ENSMALG00000013392	srsf4	65	65.027	FBgn0004587	B52	95	62.016	Drosophila_melanogaster
ENSMALG00000013392	srsf4	59	60.625	ENSEBUG00000003129	srsf4	70	61.146	Eptatretus_burgeri
ENSMALG00000013392	srsf4	66	60.894	ENSEBUG00000001681	srsf4	67	60.894	Eptatretus_burgeri
ENSMALG00000013392	srsf4	99	62.914	ENSELUG00000017551	srsf4	95	74.242	Esox_lucius
ENSMALG00000013392	srsf4	66	86.441	ENSFCAG00000027821	SRSF4	51	85.507	Felis_catus
ENSMALG00000013392	srsf4	83	95.588	ENSFHEG00000007472	srsf4	87	100.000	Fundulus_heteroclitus
ENSMALG00000013392	srsf4	66	85.955	ENSGMOG00000012906	srsf4	78	73.171	Gadus_morhua
ENSMALG00000013392	srsf4	92	78.134	ENSGAFG00000018496	srsf4	85	95.588	Gambusia_affinis
ENSMALG00000013392	srsf4	66	93.855	ENSGACG00000002389	srsf4	56	94.475	Gasterosteus_aculeatus
ENSMALG00000013392	srsf4	66	86.441	ENSGGOG00000002444	SRSF4	51	71.032	Gorilla_gorilla
ENSMALG00000013392	srsf4	66	75.275	ENSHBUG00000011326	-	62	70.455	Haplochromis_burtoni
ENSMALG00000013392	srsf4	82	94.118	ENSHCOG00000012540	srsf4	82	98.485	Hippocampus_comes
ENSMALG00000013392	srsf4	66	95.402	ENSKMAG00000013631	srsf4	92	76.015	Kryptolebias_marmoratus
ENSMALG00000013392	srsf4	65	74.586	ENSLOCG00000001442	-	50	78.142	Lepisosteus_oculatus
ENSMALG00000013392	srsf4	66	86.441	ENSMFAG00000041784	SRSF4	52	70.703	Macaca_fascicularis
ENSMALG00000013392	srsf4	66	86.441	ENSMNEG00000034931	SRSF4	52	70.703	Macaca_nemestrina
ENSMALG00000013392	srsf4	66	86.441	ENSMLEG00000031619	SRSF4	52	70.703	Mandrillus_leucophaeus
ENSMALG00000013392	srsf4	90	95.588	ENSMAMG00000004888	srsf4	99	87.252	Mastacembelus_armatus
ENSMALG00000013392	srsf4	78	95.588	ENSMZEG00005026275	srsf4	94	77.714	Maylandia_zebra
ENSMALG00000013392	srsf4	66	86.517	ENSMOCG00000013319	Srsf4	62	63.462	Microtus_ochrogaster
ENSMALG00000013392	srsf4	82	94.828	ENSMMOG00000013653	srsf4	93	94.118	Mola_mola
ENSMALG00000013392	srsf4	66	87.006	ENSMODG00000011052	SRSF4	56	87.293	Monodelphis_domestica
ENSMALG00000013392	srsf4	66	73.143	ENSNLEG00000030787	-	85	62.762	Nomascus_leucogenys
ENSMALG00000013392	srsf4	66	92.737	ENSONIG00000013730	srsf4	83	95.531	Oreochromis_niloticus
ENSMALG00000013392	srsf4	52	85.816	ENSOANG00000015169	SRSF4	50	69.856	Ornithorhynchus_anatinus
ENSMALG00000013392	srsf4	64	67.521	ENSORLG00000009430	-	76	69.955	Oryzias_latipes
ENSMALG00000013392	srsf4	66	92.697	ENSORLG00020016052	srsf4	98	77.574	Oryzias_latipes_hni
ENSMALG00000013392	srsf4	78	92.754	ENSORLG00015007566	srsf4	96	94.118	Oryzias_latipes_hsok
ENSMALG00000013392	srsf4	83	81.818	ENSOMEG00000005541	srsf4	88	81.994	Oryzias_melastigma
ENSMALG00000013392	srsf4	66	86.441	ENSPPAG00000028357	SRSF4	51	71.032	Pan_paniscus
ENSMALG00000013392	srsf4	66	86.441	ENSPPRG00000016248	SRSF4	51	85.507	Panthera_pardus
ENSMALG00000013392	srsf4	66	86.441	ENSPTRG00000000445	SRSF4	51	71.032	Pan_troglodytes
ENSMALG00000013392	srsf4	66	86.441	ENSPANG00000021937	SRSF4	52	70.703	Papio_anubis
ENSMALG00000013392	srsf4	78	80.591	ENSPMGG00000013436	srsf4	95	90.625	Periophthalmus_magnuspinnatus
ENSMALG00000013392	srsf4	65	63.536	ENSPMAG00000009397	srsf4	68	65.217	Petromyzon_marinus
ENSMALG00000013392	srsf4	94	95.588	ENSPFOG00000001306	srsf4	77	75.357	Poecilia_formosa
ENSMALG00000013392	srsf4	79	95.588	ENSPLAG00000008812	srsf4	83	95.652	Poecilia_latipinna
ENSMALG00000013392	srsf4	94	95.588	ENSPMEG00000023638	srsf4	95	95.652	Poecilia_mexicana
ENSMALG00000013392	srsf4	94	95.588	ENSPREG00000009639	srsf4	95	95.652	Poecilia_reticulata
ENSMALG00000013392	srsf4	66	86.441	ENSPPYG00000001629	SRSF4	55	85.507	Pongo_abelii
ENSMALG00000013392	srsf4	86	85.714	ENSPNYG00000003796	srsf4	79	92.308	Pundamilia_nyererei
ENSMALG00000013392	srsf4	65	94.152	ENSPNAG00000023844	srsf4	62	89.855	Pygocentrus_nattereri
ENSMALG00000013392	srsf4	66	86.441	ENSRBIG00000035789	SRSF4	52	70.703	Rhinopithecus_bieti
ENSMALG00000013392	srsf4	66	86.441	ENSRROG00000029463	SRSF4	52	70.703	Rhinopithecus_roxellana
ENSMALG00000013392	srsf4	54	84.247	ENSSHAG00000012407	SRSF4	51	84.667	Sarcophilus_harrisii
ENSMALG00000013392	srsf4	66	92.442	ENSSFOG00015020292	srsf4	82	90.991	Scleropages_formosus
ENSMALG00000013392	srsf4	87	89.730	ENSSMAG00000001707	srsf4	84	85.778	Scophthalmus_maximus
ENSMALG00000013392	srsf4	98	77.193	ENSSDUG00000007387	srsf4	94	74.785	Seriola_dumerili
ENSMALG00000013392	srsf4	88	74.026	ENSSLDG00000009745	srsf4	88	95.588	Seriola_lalandi_dorsalis
ENSMALG00000013392	srsf4	84	95.588	ENSSPAG00000014538	srsf4	93	94.118	Stegastes_partitus
ENSMALG00000013392	srsf4	92	80.685	ENSTRUG00000011891	srsf4	94	80.403	Takifugu_rubripes
ENSMALG00000013392	srsf4	97	92.553	ENSTNIG00000000115	-	82	94.944	Tetraodon_nigroviridis
ENSMALG00000013392	srsf4	66	95.455	ENSTNIG00000005573	srsf4	84	95.480	Tetraodon_nigroviridis
ENSMALG00000013392	srsf4	87	63.574	ENSTTRG00000002572	SRSF4	65	62.462	Tursiops_truncatus
ENSMALG00000013392	srsf4	99	95.588	ENSXCOG00000018826	srsf4	89	92.437	Xiphophorus_couchianus
ENSMALG00000013392	srsf4	66	70.745	ENSXCOG00000003212	-	56	73.822	Xiphophorus_couchianus
ENSMALG00000013392	srsf4	69	57.265	ENSXMAG00000005545	srsf4	69	66.514	Xiphophorus_maculatus