EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000013514 (Gene tree)
Gene ID: 109959189
Gene Symbol: rab38b
Alias: si:dkey-76a19.3
Full Name: ras-related protein Rab-38-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 5565 bases
Position: chrKV884726.1:4470113-4475677
Accession: 109959189
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000019354	MMR_HSR1	PF01926.23	0.00012	1	1
ENSMALP00000019347	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000019739	-	3061	XM_020598361	ENSMALP00000019354	219 (aa)	XP_020454017	UPI0009B324A9
ENSMALT00000019732	-	4003	-	ENSMALP00000019347	222 (aa)	-	-

Gene Model

Click here to download ENSMALG00000013514's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000013514's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000013514	rab38b	69	31.818	ENSMALG00000014149	rhebl1	79	31.818
ENSMALG00000013514	rab38b	77	38.824	ENSMALG00000005069	rab18b	80	38.824
ENSMALG00000013514	rab38b	76	34.118	ENSMALG00000012930	si:ch73-116o1.2	78	33.529
ENSMALG00000013514	rab38b	91	30.516	ENSMALG00000022693	rab33ba	86	30.516
ENSMALG00000013514	rab38b	72	34.395	ENSMALG00000020364	-	73	34.395
ENSMALG00000013514	rab38b	71	33.121	ENSMALG00000002136	rab23	81	34.302
ENSMALG00000013514	rab38b	80	34.091	ENSMALG00000003050	rab11a	80	34.091
ENSMALG00000013514	rab38b	73	40.881	ENSMALG00000014727	si:dkey-16l2.16	73	40.881
ENSMALG00000013514	rab38b	95	32.692	ENSMALG00000015936	RAB9A	96	32.692
ENSMALG00000013514	rab38b	74	38.509	ENSMALG00000006985	-	77	38.509
ENSMALG00000013514	rab38b	84	31.522	ENSMALG00000006052	rab5c	81	31.522
ENSMALG00000013514	rab38b	91	33.178	ENSMALG00000015762	rab12	87	33.178
ENSMALG00000013514	rab38b	78	37.647	ENSMALG00000012003	rab1ab	79	37.870
ENSMALG00000013514	rab38b	73	30.864	ENSMALG00000022118	rab14	78	30.864
ENSMALG00000013514	rab38b	74	37.888	ENSMALG00000021144	rab1ba	78	37.888
ENSMALG00000013514	rab38b	83	38.378	ENSMALG00000020807	-	90	38.378
ENSMALG00000013514	rab38b	75	37.647	ENSMALG00000021944	-	93	41.748
ENSMALG00000013514	rab38b	81	34.807	ENSMALG00000021949	rab11ba	81	34.807
ENSMALG00000013514	rab38b	77	35.260	ENSMALG00000012630	rab33a	76	35.260
ENSMALG00000013514	rab38b	88	46.667	ENSMALG00000018436	RAB29	85	46.667
ENSMALG00000013514	rab38b	90	32.323	ENSMALG00000012506	rab9a	95	32.323
ENSMALG00000013514	rab38b	92	33.990	ENSMALG00000004053	RAB7A	97	33.990
ENSMALG00000013514	rab38b	75	30.723	ENSMALG00000014929	rab5aa	75	30.723
ENSMALG00000013514	rab38b	82	30.769	ENSMALG00000018973	RAB39B	83	30.769
ENSMALG00000013514	rab38b	77	36.471	ENSMALG00000009813	rab18a	80	36.471
ENSMALG00000013514	rab38b	82	37.297	ENSMALG00000021129	zgc:171927	85	37.297
ENSMALG00000013514	rab38b	56	30.400	ENSMALG00000019198	arl8a	63	30.400
ENSMALG00000013514	rab38b	71	37.736	ENSMALG00000003712	zgc:101559	66	37.736
ENSMALG00000013514	rab38b	88	31.818	ENSMALG00000011693	rab22a	97	31.818
ENSMALG00000013514	rab38b	92	34.483	ENSMALG00000016312	RAB7A	97	34.483
ENSMALG00000013514	rab38b	81	32.584	ENSMALG00000012723	RAB39B	81	32.584
ENSMALG00000013514	rab38b	80	35.955	ENSMALG00000021928	rab15	80	35.955
ENSMALG00000013514	rab38b	76	33.533	ENSMALG00000004112	rab25b	78	33.533
ENSMALG00000013514	rab38b	91	32.536	ENSMALG00000003956	-	95	32.536
ENSMALG00000013514	rab38b	92	31.797	ENSMALG00000022187	rab11bb	97	31.797
ENSMALG00000013514	rab38b	73	36.250	ENSMALG00000003479	rab35b	99	36.196
ENSMALG00000013514	rab38b	92	33.168	ENSMALG00000007664	rab9b	92	33.168
ENSMALG00000013514	rab38b	95	31.050	ENSMALG00000022348	-	95	31.050
ENSMALG00000013514	rab38b	73	33.962	ENSMALG00000015154	rab25a	75	33.962
ENSMALG00000013514	rab38b	69	30.769	ENSMALG00000001062	zgc:114118	60	31.410
ENSMALG00000013514	rab38b	72	34.395	ENSMALG00000010549	rab41	72	34.395
ENSMALG00000013514	rab38b	79	31.250	ENSMALG00000013152	si:dkey-34d22.5	77	31.250
ENSMALG00000013514	rab38b	73	36.250	ENSMALG00000004342	rab2a	73	36.250
ENSMALG00000013514	rab38b	73	40.123	ENSMALG00000016038	RAB15	73	40.123
ENSMALG00000013514	rab38b	72	35.032	ENSMALG00000017417	rab6bb	73	35.032
ENSMALG00000013514	rab38b	90	32.057	ENSMALG00000004093	rab11al	94	32.057
ENSMALG00000013514	rab38b	73	35.000	ENSMALG00000010438	rab30	76	35.625
ENSMALG00000013514	rab38b	72	35.669	ENSMALG00000015854	rab6ba	73	35.669

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000013514	rab38b	93	72.059	ENSAMXG00000036330	RAB38	94	72.059	Astyanax_mexicanus
ENSMALG00000013514	rab38b	52	91.150	ENSFHEG00000018056	rab38b	93	91.150	Fundulus_heteroclitus
ENSMALG00000013514	rab38b	99	84.862	ENSMMOG00000006440	rab38b	100	84.906	Mola_mola
ENSMALG00000013514	rab38b	95	79.426	ENSPNAG00000017466	rab38b	99	79.426	Pygocentrus_nattereri