EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000013624 (Gene tree)
Gene ID: 109973132
Gene Symbol: prpf4
Alias: mg:ab03a02|zgc:65943
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 16500 bases
Position: chrKV884969.1:400411-416910
Accession: 109973132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000019520	PRP4	PF08799.11	2.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000019906	-	2537	XM_020622486	ENSMALP00000019520	510 (aa)	XP_020478142	UPI0009B41212

Gene Model

Click here to download ENSMALG00000013624's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000013624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000013624	prpf4	59	31.250	ENSMALG00000011021	-	78	31.250
ENSMALG00000013624	prpf4	57	32.911	ENSMALG00000017904	pafah1b1b	74	32.911
ENSMALG00000013624	prpf4	56	31.250	ENSMALG00000009054	poc1a	79	31.250
ENSMALG00000013624	prpf4	58	32.955	ENSMALG00000007013	tbl3	67	32.955

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000013624	prpf4	99	76.587	ENSG00000136875	PRPF4	96	76.587	Homo_sapiens
ENSMALG00000013624	prpf4	99	94.824	ENSAPOG00000014132	prpf4	99	94.824	Acanthochromis_polyacanthus
ENSMALG00000013624	prpf4	99	76.587	ENSAMEG00000013048	PRPF4	94	76.587	Ailuropoda_melanoleuca
ENSMALG00000013624	prpf4	100	94.706	ENSACIG00000005579	prpf4	100	94.706	Amphilophus_citrinellus
ENSMALG00000013624	prpf4	100	94.314	ENSAOCG00000005457	prpf4	100	94.314	Amphiprion_ocellaris
ENSMALG00000013624	prpf4	100	94.118	ENSAPEG00000000776	prpf4	100	94.118	Amphiprion_percula
ENSMALG00000013624	prpf4	100	94.902	ENSATEG00000023013	prpf4	100	94.902	Anabas_testudineus
ENSMALG00000013624	prpf4	99	77.120	ENSAPLG00000006534	PRPF4	94	77.120	Anas_platyrhynchos
ENSMALG00000013624	prpf4	99	75.930	ENSACAG00000015110	PRPF4	97	75.930	Anolis_carolinensis
ENSMALG00000013624	prpf4	99	76.587	ENSANAG00000022464	PRPF4	93	76.587	Aotus_nancymaae
ENSMALG00000013624	prpf4	100	94.510	ENSACLG00000019031	prpf4	100	94.510	Astatotilapia_calliptera
ENSMALG00000013624	prpf4	100	63.118	ENSAMXG00000006756	prpf4	100	73.725	Astyanax_mexicanus
ENSMALG00000013624	prpf4	99	76.587	ENSBTAG00000004571	PRPF4	96	76.587	Bos_taurus
ENSMALG00000013624	prpf4	92	43.975	WBGene00007972	prp-4	95	43.975	Caenorhabditis_elegans
ENSMALG00000013624	prpf4	99	76.587	ENSCJAG00000017856	PRPF4	96	76.587	Callithrix_jacchus
ENSMALG00000013624	prpf4	99	76.587	ENSCAFG00000003224	PRPF4	93	76.587	Canis_familiaris
ENSMALG00000013624	prpf4	99	76.587	ENSCAFG00020022637	PRPF4	97	76.587	Canis_lupus_dingo
ENSMALG00000013624	prpf4	99	76.587	ENSCHIG00000024648	-	96	76.587	Capra_hircus
ENSMALG00000013624	prpf4	99	76.786	ENSTSYG00000010366	PRPF4	96	76.786	Carlito_syrichta
ENSMALG00000013624	prpf4	90	68.974	ENSCAPG00000008935	PRPF4	97	68.974	Cavia_aperea
ENSMALG00000013624	prpf4	99	76.190	ENSCPOG00000010747	-	96	76.190	Cavia_porcellus
ENSMALG00000013624	prpf4	99	71.230	ENSCPOG00000014729	-	96	71.230	Cavia_porcellus
ENSMALG00000013624	prpf4	99	76.389	ENSCCAG00000028990	PRPF4	96	76.389	Cebus_capucinus
ENSMALG00000013624	prpf4	99	76.587	ENSCATG00000021552	PRPF4	96	76.587	Cercocebus_atys
ENSMALG00000013624	prpf4	99	76.587	ENSCLAG00000013448	PRPF4	96	76.587	Chinchilla_lanigera
ENSMALG00000013624	prpf4	89	76.327	ENSCHOG00000007233	PRPF4	100	76.327	Choloepus_hoffmanni
ENSMALG00000013624	prpf4	100	75.882	ENSCPBG00000019136	PRPF4	73	76.134	Chrysemys_picta_bellii
ENSMALG00000013624	prpf4	97	59.920	ENSCING00000001299	-	95	59.920	Ciona_intestinalis
ENSMALG00000013624	prpf4	99	58.153	ENSCSAVG00000009178	-	99	59.785	Ciona_savignyi
ENSMALG00000013624	prpf4	99	76.587	ENSCANG00000003246	PRPF4	96	76.587	Colobus_angolensis_palliatus
ENSMALG00000013624	prpf4	99	76.389	ENSCGRG00001016992	Prpf4	96	76.389	Cricetulus_griseus_chok1gshd
ENSMALG00000013624	prpf4	99	76.389	ENSCGRG00000017560	Prpf4	96	76.389	Cricetulus_griseus_crigri
ENSMALG00000013624	prpf4	100	88.627	ENSCSEG00000020451	prpf4	100	88.627	Cynoglossus_semilaevis
ENSMALG00000013624	prpf4	100	80.784	ENSDARG00000067639	prpf4	100	80.784	Danio_rerio
ENSMALG00000013624	prpf4	99	76.389	ENSDNOG00000013203	PRPF4	96	76.389	Dasypus_novemcinctus
ENSMALG00000013624	prpf4	99	76.984	ENSDORG00000026275	Prpf4	96	76.984	Dipodomys_ordii
ENSMALG00000013624	prpf4	99	49.909	FBgn0036733	U4-U6-60K	99	50.091	Drosophila_melanogaster
ENSMALG00000013624	prpf4	99	77.183	ENSETEG00000020389	PRPF4	96	77.183	Echinops_telfairi
ENSMALG00000013624	prpf4	99	68.539	ENSEBUG00000015229	prpf4	88	69.213	Eptatretus_burgeri
ENSMALG00000013624	prpf4	99	76.587	ENSEASG00005022678	PRPF4	96	76.587	Equus_asinus_asinus
ENSMALG00000013624	prpf4	99	76.587	ENSECAG00000007072	PRPF4	96	76.587	Equus_caballus
ENSMALG00000013624	prpf4	98	60.909	ENSEEUG00000007480	PRPF4	96	60.909	Erinaceus_europaeus
ENSMALG00000013624	prpf4	100	81.569	ENSELUG00000007510	prpf4	100	81.569	Esox_lucius
ENSMALG00000013624	prpf4	99	76.587	ENSFCAG00000005514	PRPF4	96	76.587	Felis_catus
ENSMALG00000013624	prpf4	99	76.524	ENSFALG00000005423	PRPF4	85	76.524	Ficedula_albicollis
ENSMALG00000013624	prpf4	99	76.587	ENSFDAG00000005839	PRPF4	96	76.587	Fukomys_damarensis
ENSMALG00000013624	prpf4	100	90.980	ENSFHEG00000001300	prpf4	100	90.980	Fundulus_heteroclitus
ENSMALG00000013624	prpf4	99	77.120	ENSGALG00000008857	PRPF4	94	77.120	Gallus_gallus
ENSMALG00000013624	prpf4	94	88.450	ENSGAFG00000012164	prpf4	70	88.450	Gambusia_affinis
ENSMALG00000013624	prpf4	100	83.203	ENSGACG00000015476	prpf4	100	83.008	Gasterosteus_aculeatus
ENSMALG00000013624	prpf4	100	75.490	ENSGAGG00000025029	PRPF4	94	75.740	Gopherus_agassizii
ENSMALG00000013624	prpf4	99	76.587	ENSGGOG00000006943	PRPF4	96	76.587	Gorilla_gorilla
ENSMALG00000013624	prpf4	100	94.510	ENSHBUG00000000562	prpf4	100	94.510	Haplochromis_burtoni
ENSMALG00000013624	prpf4	99	76.786	ENSHGLG00000015191	PRPF4	96	76.786	Heterocephalus_glaber_female
ENSMALG00000013624	prpf4	95	66.053	ENSHGLG00000016628	-	95	66.462	Heterocephalus_glaber_female
ENSMALG00000013624	prpf4	99	61.706	ENSHGLG00000003838	-	96	61.706	Heterocephalus_glaber_female
ENSMALG00000013624	prpf4	99	61.706	ENSHGLG00100005571	-	96	61.706	Heterocephalus_glaber_male
ENSMALG00000013624	prpf4	100	79.216	ENSIPUG00000017956	PRPF4	100	79.216	Ictalurus_punctatus
ENSMALG00000013624	prpf4	99	76.786	ENSSTOG00000027833	PRPF4	96	76.786	Ictidomys_tridecemlineatus
ENSMALG00000013624	prpf4	99	76.587	ENSJJAG00000008838	Prpf4	96	76.587	Jaculus_jaculus
ENSMALG00000013624	prpf4	100	91.765	ENSKMAG00000013236	prpf4	100	91.765	Kryptolebias_marmoratus
ENSMALG00000013624	prpf4	100	95.098	ENSLBEG00000020611	prpf4	100	95.098	Labrus_bergylta
ENSMALG00000013624	prpf4	100	71.875	ENSLACG00000016317	PRPF4	97	71.875	Latimeria_chalumnae
ENSMALG00000013624	prpf4	100	80.980	ENSLOCG00000000581	prpf4	100	81.373	Lepisosteus_oculatus
ENSMALG00000013624	prpf4	99	76.587	ENSLAFG00000018225	PRPF4	96	76.587	Loxodonta_africana
ENSMALG00000013624	prpf4	99	76.389	ENSMFAG00000039397	PRPF4	96	76.389	Macaca_fascicularis
ENSMALG00000013624	prpf4	99	76.587	ENSMMUG00000005844	PRPF4	96	76.587	Macaca_mulatta
ENSMALG00000013624	prpf4	99	67.857	ENSMNEG00000033737	PRPF4	96	67.857	Macaca_nemestrina
ENSMALG00000013624	prpf4	99	76.587	ENSMLEG00000040284	PRPF4	96	76.587	Mandrillus_leucophaeus
ENSMALG00000013624	prpf4	100	95.098	ENSMAMG00000020141	prpf4	100	95.098	Mastacembelus_armatus
ENSMALG00000013624	prpf4	100	94.510	ENSMZEG00005023205	prpf4	100	94.510	Maylandia_zebra
ENSMALG00000013624	prpf4	99	76.529	ENSMGAG00000001796	PRPF4	94	76.529	Meleagris_gallopavo
ENSMALG00000013624	prpf4	99	76.389	ENSMAUG00000018022	Prpf4	96	76.389	Mesocricetus_auratus
ENSMALG00000013624	prpf4	99	76.031	ENSMICG00000015022	PRPF4	97	76.031	Microcebus_murinus
ENSMALG00000013624	prpf4	99	76.389	ENSMOCG00000018273	Prpf4	96	76.389	Microtus_ochrogaster
ENSMALG00000013624	prpf4	100	91.961	ENSMMOG00000021177	prpf4	100	91.961	Mola_mola
ENSMALG00000013624	prpf4	99	75.835	ENSMODG00000004444	-	97	76.134	Monodelphis_domestica
ENSMALG00000013624	prpf4	99	75.049	ENSMODG00000025096	-	94	75.345	Monodelphis_domestica
ENSMALG00000013624	prpf4	99	76.389	MGP_CAROLIEiJ_G0026078	Prpf4	96	76.389	Mus_caroli
ENSMALG00000013624	prpf4	99	76.389	ENSMUSG00000066148	Prpf4	96	76.389	Mus_musculus
ENSMALG00000013624	prpf4	99	76.587	MGP_PahariEiJ_G0028413	Prpf4	96	76.587	Mus_pahari
ENSMALG00000013624	prpf4	99	76.389	MGP_SPRETEiJ_G0027042	Prpf4	96	76.389	Mus_spretus
ENSMALG00000013624	prpf4	99	76.587	ENSMPUG00000007883	PRPF4	96	76.587	Mustela_putorius_furo
ENSMALG00000013624	prpf4	99	75.397	ENSMLUG00000008626	-	94	75.397	Myotis_lucifugus
ENSMALG00000013624	prpf4	99	76.389	ENSMLUG00000015309	-	93	76.389	Myotis_lucifugus
ENSMALG00000013624	prpf4	99	71.429	ENSNGAG00000000468	Prpf4	96	71.429	Nannospalax_galili
ENSMALG00000013624	prpf4	100	94.510	ENSNBRG00000007972	prpf4	100	94.510	Neolamprologus_brichardi
ENSMALG00000013624	prpf4	99	76.587	ENSNLEG00000016647	PRPF4	96	76.587	Nomascus_leucogenys
ENSMALG00000013624	prpf4	99	75.246	ENSMEUG00000013256	PRPF4	98	75.542	Notamacropus_eugenii
ENSMALG00000013624	prpf4	99	76.587	ENSOPRG00000005302	PRPF4	96	76.587	Ochotona_princeps
ENSMALG00000013624	prpf4	99	76.587	ENSODEG00000018147	PRPF4	96	76.587	Octodon_degus
ENSMALG00000013624	prpf4	100	94.314	ENSONIG00000012671	prpf4	100	94.314	Oreochromis_niloticus
ENSMALG00000013624	prpf4	99	76.786	ENSOCUG00000005046	PRPF4	96	76.786	Oryctolagus_cuniculus
ENSMALG00000013624	prpf4	100	90.000	ENSORLG00000019641	prpf4	100	90.000	Oryzias_latipes
ENSMALG00000013624	prpf4	100	90.000	ENSORLG00020019438	prpf4	100	90.000	Oryzias_latipes_hni
ENSMALG00000013624	prpf4	100	88.824	ENSOMEG00000020941	prpf4	100	89.441	Oryzias_melastigma
ENSMALG00000013624	prpf4	99	72.619	ENSOGAG00000007802	PRPF4	94	72.619	Otolemur_garnettii
ENSMALG00000013624	prpf4	99	76.587	ENSOARG00000006319	PRPF4	93	76.587	Ovis_aries
ENSMALG00000013624	prpf4	99	76.587	ENSPPAG00000041797	PRPF4	96	76.587	Pan_paniscus
ENSMALG00000013624	prpf4	99	76.587	ENSPPRG00000014360	PRPF4	96	76.587	Panthera_pardus
ENSMALG00000013624	prpf4	99	76.587	ENSPTIG00000009574	PRPF4	96	76.587	Panthera_tigris_altaica
ENSMALG00000013624	prpf4	99	76.587	ENSPTRG00000021274	PRPF4	96	76.587	Pan_troglodytes
ENSMALG00000013624	prpf4	99	76.786	ENSPANG00000025776	PRPF4	92	76.786	Papio_anubis
ENSMALG00000013624	prpf4	100	81.176	ENSPKIG00000017259	prpf4	100	81.176	Paramormyrops_kingsleyae
ENSMALG00000013624	prpf4	99	76.134	ENSPSIG00000010713	PRPF4	89	76.134	Pelodiscus_sinensis
ENSMALG00000013624	prpf4	100	64.498	ENSPMGG00000000997	prpf4	98	65.799	Periophthalmus_magnuspinnatus
ENSMALG00000013624	prpf4	99	76.389	ENSPEMG00000024115	Prpf4	96	76.389	Peromyscus_maniculatus_bairdii
ENSMALG00000013624	prpf4	99	75.442	ENSPCIG00000003821	PRPF4	98	75.740	Phascolarctos_cinereus
ENSMALG00000013624	prpf4	100	84.436	ENSPFOG00000013524	prpf4	99	88.146	Poecilia_formosa
ENSMALG00000013624	prpf4	93	86.462	ENSPLAG00000011620	prpf4	97	86.378	Poecilia_latipinna
ENSMALG00000013624	prpf4	98	88.496	ENSPMEG00000006813	prpf4	100	88.496	Poecilia_mexicana
ENSMALG00000013624	prpf4	99	76.587	ENSPCAG00000002561	PRPF4	98	76.587	Procavia_capensis
ENSMALG00000013624	prpf4	99	76.587	ENSPCOG00000011975	PRPF4	96	76.587	Propithecus_coquereli
ENSMALG00000013624	prpf4	99	73.413	ENSPVAG00000004708	PRPF4	96	73.413	Pteropus_vampyrus
ENSMALG00000013624	prpf4	100	94.706	ENSPNYG00000008013	prpf4	100	94.706	Pundamilia_nyererei
ENSMALG00000013624	prpf4	100	80.784	ENSPNAG00000000697	prpf4	100	80.784	Pygocentrus_nattereri
ENSMALG00000013624	prpf4	99	76.389	ENSRNOG00000014777	Prpf4	96	76.389	Rattus_norvegicus
ENSMALG00000013624	prpf4	99	76.587	ENSRBIG00000040221	PRPF4	96	76.587	Rhinopithecus_bieti
ENSMALG00000013624	prpf4	99	76.587	ENSRROG00000040240	PRPF4	96	76.587	Rhinopithecus_roxellana
ENSMALG00000013624	prpf4	99	75.442	ENSSHAG00000017658	PRPF4	97	75.740	Sarcophilus_harrisii
ENSMALG00000013624	prpf4	100	81.961	ENSSFOG00015008963	prpf4	100	81.961	Scleropages_formosus
ENSMALG00000013624	prpf4	100	92.941	ENSSMAG00000008889	prpf4	100	92.941	Scophthalmus_maximus
ENSMALG00000013624	prpf4	99	96.480	ENSSDUG00000022083	prpf4	94	96.480	Seriola_dumerili
ENSMALG00000013624	prpf4	99	96.273	ENSSLDG00000008115	prpf4	94	96.273	Seriola_lalandi_dorsalis
ENSMALG00000013624	prpf4	99	76.424	ENSSPUG00000015582	PRPF4	97	76.424	Sphenodon_punctatus
ENSMALG00000013624	prpf4	100	87.719	ENSSPAG00000011286	prpf4	100	87.719	Stegastes_partitus
ENSMALG00000013624	prpf4	99	76.587	ENSSSCG00000024648	PRPF4	96	76.587	Sus_scrofa
ENSMALG00000013624	prpf4	97	77.980	ENSTGUG00000002623	PRPF4	100	78.004	Taeniopygia_guttata
ENSMALG00000013624	prpf4	100	88.627	ENSTRUG00000008853	prpf4	100	88.627	Takifugu_rubripes
ENSMALG00000013624	prpf4	100	89.020	ENSTNIG00000013250	prpf4	100	89.020	Tetraodon_nigroviridis
ENSMALG00000013624	prpf4	99	69.444	ENSTBEG00000000821	PRPF4	96	69.444	Tupaia_belangeri
ENSMALG00000013624	prpf4	89	78.523	ENSTTRG00000003246	PRPF4	85	78.523	Tursiops_truncatus
ENSMALG00000013624	prpf4	69	67.514	ENSUAMG00000018288	PRPF4	95	67.514	Ursus_americanus
ENSMALG00000013624	prpf4	99	75.992	ENSUMAG00000019375	PRPF4	96	75.992	Ursus_maritimus
ENSMALG00000013624	prpf4	99	76.190	ENSVPAG00000005281	PRPF4	96	76.190	Vicugna_pacos
ENSMALG00000013624	prpf4	99	75.937	ENSVVUG00000002476	PRPF4	99	75.937	Vulpes_vulpes
ENSMALG00000013624	prpf4	70	64.835	ENSXCOG00000006101	prpf4	93	67.726	Xiphophorus_couchianus
ENSMALG00000013624	prpf4	91	76.559	ENSXMAG00000002750	prpf4	100	77.843	Xiphophorus_maculatus