EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000013825 (Gene tree)
Gene ID: -
Gene Symbol: scaf4a
Alias: fa96d07|si:dkey-50p8.3|wu:fa96d07
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 9080 bases
Position: chrKV884726.1:4606433-4615512
Accession: 109959220
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000019863	RRM_1	PF00076.22	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000020252	-	2781	XM_020598415	ENSMALP00000019863	926 (aa)	XP_020454071	-

Gene Model

Click here to download ENSMALG00000013825's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000013825's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000013825	scaf4a	61	59.410	ENSAPOG00000019615	scaf4b	79	58.672	Acanthochromis_polyacanthus
ENSMALG00000013825	scaf4a	68	58.303	ENSAOCG00000010433	scaf4b	79	54.380	Amphiprion_ocellaris
ENSMALG00000013825	scaf4a	68	58.303	ENSAPEG00000010913	scaf4b	79	54.380	Amphiprion_percula
ENSMALG00000013825	scaf4a	70	56.627	ENSATEG00000011758	scaf4b	58	60.000	Anabas_testudineus
ENSMALG00000013825	scaf4a	80	77.124	ENSACAG00000002569	SCAF4	55	61.356	Anolis_carolinensis
ENSMALG00000013825	scaf4a	54	59.583	ENSACLG00000024833	scaf4b	82	57.194	Astatotilapia_calliptera
ENSMALG00000013825	scaf4a	50	56.872	ENSCSEG00000012808	-	59	57.447	Cynoglossus_semilaevis
ENSMALG00000013825	scaf4a	65	49.235	ENSCVAG00000009142	scaf4b	52	70.922	Cyprinodon_variegatus
ENSMALG00000013825	scaf4a	50	51.389	ENSEBUG00000003891	SCAF8	54	51.341	Eptatretus_burgeri
ENSMALG00000013825	scaf4a	54	53.287	ENSELUG00000002779	SCAF8	71	52.595	Esox_lucius
ENSMALG00000013825	scaf4a	62	58.015	ENSFHEG00000007634	scaf4b	58	59.893	Fundulus_heteroclitus
ENSMALG00000013825	scaf4a	93	74.747	ENSFHEG00000017866	scaf4a	71	74.247	Fundulus_heteroclitus
ENSMALG00000013825	scaf4a	54	71.311	ENSGMOG00000015188	scaf4a	55	70.588	Gadus_morhua
ENSMALG00000013825	scaf4a	54	78.840	ENSGAFG00000019460	scaf4a	58	79.181	Gambusia_affinis
ENSMALG00000013825	scaf4a	70	75.000	ENSGACG00000020580	scaf4a	50	75.000	Gasterosteus_aculeatus
ENSMALG00000013825	scaf4a	54	83.391	ENSHBUG00000007920	scaf4a	77	83.391	Haplochromis_burtoni
ENSMALG00000013825	scaf4a	70	76.961	ENSHCOG00000006849	scaf4a	51	77.576	Hippocampus_comes
ENSMALG00000013825	scaf4a	69	55.882	ENSKMAG00000005742	scaf4b	58	61.376	Kryptolebias_marmoratus
ENSMALG00000013825	scaf4a	94	82.759	ENSLBEG00000014675	scaf4a	85	83.142	Labrus_bergylta
ENSMALG00000013825	scaf4a	50	58.730	ENSLACG00000013913	SCAF4	56	57.021	Latimeria_chalumnae
ENSMALG00000013825	scaf4a	94	82.007	ENSMZEG00005024349	scaf4a	77	82.007	Maylandia_zebra
ENSMALG00000013825	scaf4a	50	72.727	ENSONIG00000005610	scaf4b	67	72.593	Oreochromis_niloticus
ENSMALG00000013825	scaf4a	54	82.699	ENSONIG00000004687	scaf4a	76	82.699	Oreochromis_niloticus
ENSMALG00000013825	scaf4a	73	52.174	ENSORLG00000003420	scaf4b	53	70.922	Oryzias_latipes
ENSMALG00000013825	scaf4a	91	76.444	ENSORLG00000004384	scaf4a	76	77.397	Oryzias_latipes
ENSMALG00000013825	scaf4a	73	52.649	ENSORLG00020013853	scaf4b	53	71.631	Oryzias_latipes_hni
ENSMALG00000013825	scaf4a	91	76.444	ENSORLG00020011857	scaf4a	76	77.055	Oryzias_latipes_hni
ENSMALG00000013825	scaf4a	91	77.778	ENSOMEG00000014482	scaf4a	76	78.070	Oryzias_melastigma
ENSMALG00000013825	scaf4a	52	68.182	ENSPKIG00000022408	scaf4a	71	70.242	Paramormyrops_kingsleyae
ENSMALG00000013825	scaf4a	51	61.348	ENSPSIG00000014242	SCAF4	57	60.959	Pelodiscus_sinensis
ENSMALG00000013825	scaf4a	88	70.677	ENSPMGG00000016741	scaf4a	83	72.180	Periophthalmus_magnuspinnatus
ENSMALG00000013825	scaf4a	78	80.339	ENSPFOG00000017156	scaf4a	55	80.339	Poecilia_formosa
ENSMALG00000013825	scaf4a	62	57.736	ENSPLAG00000004403	-	61	56.250	Poecilia_latipinna
ENSMALG00000013825	scaf4a	54	81.100	ENSPLAG00000001972	scaf4a	64	81.100	Poecilia_latipinna
ENSMALG00000013825	scaf4a	67	49.845	ENSPMEG00000006666	-	57	60.106	Poecilia_mexicana
ENSMALG00000013825	scaf4a	61	58.491	ENSPREG00000013510	scaf4b	57	60.638	Poecilia_reticulata
ENSMALG00000013825	scaf4a	54	59.583	ENSPNYG00000010526	scaf4b	82	56.835	Pundamilia_nyererei
ENSMALG00000013825	scaf4a	73	54.355	ENSSMAG00000003738	scaf4b	60	60.526	Scophthalmus_maximus
ENSMALG00000013825	scaf4a	96	78.893	ENSSMAG00000017901	scaf4a	82	78.547	Scophthalmus_maximus
ENSMALG00000013825	scaf4a	51	59.259	ENSSDUG00000012380	scaf4b	79	56.044	Seriola_dumerili
ENSMALG00000013825	scaf4a	51	59.259	ENSSLDG00000023152	-	79	56.044	Seriola_lalandi_dorsalis
ENSMALG00000013825	scaf4a	70	63.991	ENSTRUG00000023543	scaf4a	81	72.768	Takifugu_rubripes
ENSMALG00000013825	scaf4a	65	58.935	ENSTRUG00000009536	-	53	74.265	Takifugu_rubripes
ENSMALG00000013825	scaf4a	74	78.322	ENSTNIG00000009945	scaf4a	64	78.322	Tetraodon_nigroviridis