EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000013883 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 11995 bases
Position: chrKV884715.1:3176780-3188774
Accession: 109957473
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000019884	SLBP_RNA_bind	PF15247.6	1.1e-28	1	1
ENSMALP00000019900	SLBP_RNA_bind	PF15247.6	1.1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000020273	-	2047	-	ENSMALP00000019884	383 (aa)	-	-
ENSMALT00000020290	-	4623	XM_020595364	ENSMALP00000019900	383 (aa)	XP_020451020	-

Gene Model

Click here to download ENSMALG00000013883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000013883's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000013883	-	66	50.195	ENSG00000163950	SLBP	84	53.211	Homo_sapiens
ENSMALG00000013883	-	74	81.272	ENSAPOG00000004953	slbp	100	81.272	Acanthochromis_polyacanthus
ENSMALG00000013883	-	69	75.000	ENSACIG00000022308	slbp	97	75.000	Amphilophus_citrinellus
ENSMALG00000013883	-	74	81.625	ENSAOCG00000024545	slbp	100	81.625	Amphiprion_ocellaris
ENSMALG00000013883	-	74	81.625	ENSAPEG00000017629	slbp	100	81.625	Amphiprion_percula
ENSMALG00000013883	-	74	84.806	ENSATEG00000016358	slbp	100	84.806	Anabas_testudineus
ENSMALG00000013883	-	55	50.685	ENSAPLG00000015989	-	91	53.521	Anas_platyrhynchos
ENSMALG00000013883	-	66	48.485	ENSANAG00000034769	SLBP	84	53.211	Aotus_nancymaae
ENSMALG00000013883	-	74	76.325	ENSACLG00000007036	-	100	76.325	Astatotilapia_calliptera
ENSMALG00000013883	-	72	56.228	ENSAMXG00000014527	slbp	97	57.040	Astyanax_mexicanus
ENSMALG00000013883	-	59	53.191	ENSBTAG00000001328	SLBP	84	48.659	Bos_taurus
ENSMALG00000013883	-	66	49.027	ENSCJAG00000001790	SLBP	81	48.462	Callithrix_jacchus
ENSMALG00000013883	-	54	56.398	ENSCAFG00000015016	SLBP	84	49.425	Canis_familiaris
ENSMALG00000013883	-	54	56.398	ENSCAFG00020012334	SLBP	84	49.425	Canis_lupus_dingo
ENSMALG00000013883	-	57	54.545	ENSCHIG00000019364	SLBP	87	47.601	Capra_hircus
ENSMALG00000013883	-	58	52.655	ENSTSYG00000000376	SLBP	84	52.752	Carlito_syrichta
ENSMALG00000013883	-	56	50.917	ENSCPOG00000000031	SLBP	83	48.077	Cavia_porcellus
ENSMALG00000013883	-	66	50.195	ENSCATG00000029173	SLBP	87	51.770	Cercocebus_atys
ENSMALG00000013883	-	66	39.147	ENSCSAG00000015628	SLBP	84	38.697	Chlorocebus_sabaeus
ENSMALG00000013883	-	66	53.725	ENSCPBG00000000746	SLBP	85	53.101	Chrysemys_picta_bellii
ENSMALG00000013883	-	55	53.991	ENSCANG00000041008	SLBP	91	52.778	Colobus_angolensis_palliatus
ENSMALG00000013883	-	59	53.275	ENSCGRG00001012991	-	91	46.786	Cricetulus_griseus_chok1gshd
ENSMALG00000013883	-	54	55.502	ENSCGRG00001009760	-	84	48.077	Cricetulus_griseus_chok1gshd
ENSMALG00000013883	-	54	55.502	ENSCGRG00000004506	Slbp	84	48.077	Cricetulus_griseus_crigri
ENSMALG00000013883	-	73	74.460	ENSCSEG00000020337	-	98	75.273	Cynoglossus_semilaevis
ENSMALG00000013883	-	70	69.742	ENSCVAG00000019592	-	97	69.742	Cyprinodon_variegatus
ENSMALG00000013883	-	73	52.249	ENSDARG00000100558	slbp	90	52.941	Danio_rerio
ENSMALG00000013883	-	54	57.619	ENSDNOG00000047539	SLBP	83	51.181	Dasypus_novemcinctus
ENSMALG00000013883	-	55	49.770	ENSETEG00000004641	SLBP	84	52.315	Echinops_telfairi
ENSMALG00000013883	-	67	62.692	ENSELUG00000012854	slbp	91	62.934	Esox_lucius
ENSMALG00000013883	-	67	50.584	ENSFALG00000010003	-	86	50.584	Ficedula_albicollis
ENSMALG00000013883	-	67	72.308	ENSFHEG00000007497	slbp	92	70.769	Fundulus_heteroclitus
ENSMALG00000013883	-	67	51.172	ENSGALG00000015712	SLBP	86	51.172	Gallus_gallus
ENSMALG00000013883	-	74	71.479	ENSGAFG00000019577	slbp	100	71.536	Gambusia_affinis
ENSMALG00000013883	-	69	69.057	ENSGACG00000019596	slbp	96	69.057	Gasterosteus_aculeatus
ENSMALG00000013883	-	54	58.454	ENSGAGG00000012096	SLBP	80	58.852	Gopherus_agassizii
ENSMALG00000013883	-	66	50.195	ENSGGOG00000003167	SLBP	84	53.211	Gorilla_gorilla
ENSMALG00000013883	-	74	76.678	ENSHBUG00000003338	-	100	76.678	Haplochromis_burtoni
ENSMALG00000013883	-	59	45.652	ENSHGLG00100014906	-	84	45.106	Heterocephalus_glaber_male
ENSMALG00000013883	-	74	69.858	ENSHCOG00000013425	slbp	99	69.858	Hippocampus_comes
ENSMALG00000013883	-	62	54.902	ENSIPUG00000016780	slbp	92	55.686	Ictalurus_punctatus
ENSMALG00000013883	-	54	55.981	ENSJJAG00000002394	-	83	47.490	Jaculus_jaculus
ENSMALG00000013883	-	54	55.981	ENSJJAG00000020549	-	84	49.231	Jaculus_jaculus
ENSMALG00000013883	-	74	70.486	ENSKMAG00000008187	slbp	100	70.486	Kryptolebias_marmoratus
ENSMALG00000013883	-	74	72.695	ENSLBEG00000024709	slbp	100	72.695	Labrus_bergylta
ENSMALG00000013883	-	67	48.689	ENSLACG00000014623	SLBP	88	48.263	Latimeria_chalumnae
ENSMALG00000013883	-	66	58.113	ENSLOCG00000011027	slbp	84	58.755	Lepisosteus_oculatus
ENSMALG00000013883	-	53	58.738	ENSLAFG00000012933	SLBP	82	57.075	Loxodonta_africana
ENSMALG00000013883	-	66	50.195	ENSMFAG00000030130	SLBP	80	49.268	Macaca_fascicularis
ENSMALG00000013883	-	66	48.864	ENSMMUG00000032303	SLBP	88	52.968	Macaca_mulatta
ENSMALG00000013883	-	56	53.704	ENSMLEG00000024639	SLBP	80	52.968	Mandrillus_leucophaeus
ENSMALG00000013883	-	73	78.929	ENSMAMG00000001046	-	99	78.929	Mastacembelus_armatus
ENSMALG00000013883	-	74	76.678	ENSMZEG00005017261	-	100	76.678	Maylandia_zebra
ENSMALG00000013883	-	55	54.028	ENSMGAG00000013085	SLBP	92	53.271	Meleagris_gallopavo
ENSMALG00000013883	-	59	53.509	ENSMAUG00000009490	Slbp	89	46.953	Mesocricetus_auratus
ENSMALG00000013883	-	58	53.333	ENSMICG00000014244	SLBP	84	53.211	Microcebus_murinus
ENSMALG00000013883	-	54	55.502	ENSMOCG00000015826	Slbp	83	57.216	Microtus_ochrogaster
ENSMALG00000013883	-	67	64.729	ENSMMOG00000010181	slbp	93	64.729	Mola_mola
ENSMALG00000013883	-	54	56.938	ENSMODG00000004304	SLBP	87	50.593	Monodelphis_domestica
ENSMALG00000013883	-	56	54.167	MGP_CAROLIEiJ_G0027117	Slbp	80	57.732	Mus_caroli
ENSMALG00000013883	-	56	54.167	ENSMUSG00000004642	Slbp	81	57.732	Mus_musculus
ENSMALG00000013883	-	56	54.167	MGP_PahariEiJ_G0016901	Slbp	80	57.732	Mus_pahari
ENSMALG00000013883	-	56	54.167	MGP_SPRETEiJ_G0028113	Slbp	81	57.732	Mus_spretus
ENSMALG00000013883	-	56	53.704	ENSNGAG00000020799	Slbp	84	48.846	Nannospalax_galili
ENSMALG00000013883	-	63	78.926	ENSNBRG00000006044	-	91	78.926	Neolamprologus_brichardi
ENSMALG00000013883	-	66	48.864	ENSNLEG00000000048	SLBP	84	53.211	Nomascus_leucogenys
ENSMALG00000013883	-	74	74.558	ENSONIG00000017469	-	100	74.558	Oreochromis_niloticus
ENSMALG00000013883	-	55	54.717	ENSOANG00000014243	SLBP	86	54.717	Ornithorhynchus_anatinus
ENSMALG00000013883	-	74	61.972	ENSORLG00000024887	-	99	61.972	Oryzias_latipes
ENSMALG00000013883	-	73	59.075	ENSORLG00020007798	slbp	99	59.075	Oryzias_latipes_hni
ENSMALG00000013883	-	74	60.915	ENSORLG00015016656	slbp	99	60.915	Oryzias_latipes_hsok
ENSMALG00000013883	-	74	59.859	ENSOMEG00000010818	slbp	100	60.702	Oryzias_melastigma
ENSMALG00000013883	-	57	53.153	ENSOGAG00000009750	SLBP	83	49.231	Otolemur_garnettii
ENSMALG00000013883	-	66	49.416	ENSPPAG00000033300	SLBP	89	48.472	Pan_paniscus
ENSMALG00000013883	-	66	49.416	ENSPTRG00000015832	SLBP	84	53.211	Pan_troglodytes
ENSMALG00000013883	-	57	52.466	ENSPANG00000004932	SLBP	87	51.770	Papio_anubis
ENSMALG00000013883	-	66	60.079	ENSPKIG00000006183	slbp	90	58.303	Paramormyrops_kingsleyae
ENSMALG00000013883	-	65	60.400	ENSPMGG00000017684	-	88	72.864	Periophthalmus_magnuspinnatus
ENSMALG00000013883	-	54	55.502	ENSPEMG00000018369	Slbp	84	48.077	Peromyscus_maniculatus_bairdii
ENSMALG00000013883	-	74	72.887	ENSPFOG00000000462	slbp	100	72.887	Poecilia_formosa
ENSMALG00000013883	-	74	72.887	ENSPLAG00000008300	slbp	100	72.887	Poecilia_latipinna
ENSMALG00000013883	-	74	72.887	ENSPMEG00000020807	slbp	100	72.887	Poecilia_mexicana
ENSMALG00000013883	-	74	72.535	ENSPREG00000004561	slbp	100	72.535	Poecilia_reticulata
ENSMALG00000013883	-	66	50.195	ENSPPYG00000014529	SLBP	83	49.615	Pongo_abelii
ENSMALG00000013883	-	55	53.488	ENSPCOG00000017399	SLBP	69	63.095	Propithecus_coquereli
ENSMALG00000013883	-	74	76.678	ENSPNYG00000005451	-	100	76.678	Pundamilia_nyererei
ENSMALG00000013883	-	65	59.363	ENSPNAG00000018503	slbp	88	59.363	Pygocentrus_nattereri
ENSMALG00000013883	-	54	55.981	ENSRNOG00000037162	Slbp	84	48.462	Rattus_norvegicus
ENSMALG00000013883	-	66	50.195	ENSRBIG00000039159	SLBP	87	51.770	Rhinopithecus_bieti
ENSMALG00000013883	-	66	50.195	ENSRROG00000030081	SLBP	85	49.615	Rhinopithecus_roxellana
ENSMALG00000013883	-	71	57.143	ENSSFOG00015019429	slbp	94	57.143	Scleropages_formosus
ENSMALG00000013883	-	73	80.427	ENSSMAG00000016028	-	99	80.427	Scophthalmus_maximus
ENSMALG00000013883	-	72	84.727	ENSSDUG00000000855	-	98	84.727	Seriola_dumerili
ENSMALG00000013883	-	73	59.441	ENSSLDG00000007554	-	92	59.091	Seriola_lalandi_dorsalis
ENSMALG00000013883	-	66	47.431	ENSSPUG00000016007	SLBP	87	50.584	Sphenodon_punctatus
ENSMALG00000013883	-	74	77.778	ENSSPAG00000004021	slbp	99	78.927	Stegastes_partitus
ENSMALG00000013883	-	54	55.238	ENSSSCG00000008676	SLBP	84	48.659	Sus_scrofa
ENSMALG00000013883	-	67	50.588	ENSTGUG00000010626	-	92	50.000	Taeniopygia_guttata
ENSMALG00000013883	-	67	75.676	ENSTRUG00000000688	slbp	91	75.676	Takifugu_rubripes
ENSMALG00000013883	-	67	68.627	ENSTNIG00000000484	-	97	68.627	Tetraodon_nigroviridis
ENSMALG00000013883	-	50	31.606	ENSTBEG00000004085	SLBP	64	43.158	Tupaia_belangeri
ENSMALG00000013883	-	58	50.862	ENSUAMG00000012990	SLBP	89	46.786	Ursus_americanus
ENSMALG00000013883	-	54	56.398	ENSVVUG00000015578	-	84	49.425	Vulpes_vulpes
ENSMALG00000013883	-	67	49.225	ENSXETG00000003876	slbp	89	48.062	Xenopus_tropicalis
ENSMALG00000013883	-	69	69.663	ENSXCOG00000008275	slbp	100	69.888	Xiphophorus_couchianus
ENSMALG00000013883	-	74	71.127	ENSXMAG00000001331	-	99	71.127	Xiphophorus_maculatus