EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000014071 (Gene tree)
Gene ID: 109965091
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 47086 bases
Position: chrKV884783.1:295424-342509
Accession: 109965091
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000020186	CPSF_A	PF03178.15	2.7e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000020581	-	6892	XM_020608833	ENSMALP00000020186	1139 (aa)	XP_020464489	UPI0009B35CB9

Gene Model

Click here to download ENSMALG00000014071's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03420	Nucleotide excision repair	KEGG
malb04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000014071's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000014071	ddb1	100	91.404	ENSG00000167986	DDB1	100	96.575	Homo_sapiens
ENSMALG00000014071	ddb1	98	99.282	ENSAPOG00000005036	ddb1	99	99.286	Acanthochromis_polyacanthus
ENSMALG00000014071	ddb1	100	91.491	ENSAMEG00000016518	DDB1	100	91.491	Ailuropoda_melanoleuca
ENSMALG00000014071	ddb1	86	98.878	ENSACIG00000020624	ddb1	99	98.878	Amphilophus_citrinellus
ENSMALG00000014071	ddb1	100	99.298	ENSAOCG00000003066	ddb1	100	99.298	Amphiprion_ocellaris
ENSMALG00000014071	ddb1	100	99.298	ENSAPEG00000000092	ddb1	100	99.298	Amphiprion_percula
ENSMALG00000014071	ddb1	94	99.163	ENSATEG00000020571	ddb1	97	99.163	Anabas_testudineus
ENSMALG00000014071	ddb1	99	90.000	ENSAPLG00000007174	DDB1	99	90.000	Anas_platyrhynchos
ENSMALG00000014071	ddb1	100	90.877	ENSACAG00000017758	DDB1	100	90.877	Anolis_carolinensis
ENSMALG00000014071	ddb1	100	91.404	ENSANAG00000021878	DDB1	100	91.404	Aotus_nancymaae
ENSMALG00000014071	ddb1	100	98.947	ENSACLG00000012401	ddb1	100	98.947	Astatotilapia_calliptera
ENSMALG00000014071	ddb1	100	91.404	ENSBTAG00000021569	DDB1	93	91.404	Bos_taurus
ENSMALG00000014071	ddb1	100	37.040	WBGene00010890	ddb-1	100	37.040	Caenorhabditis_elegans
ENSMALG00000014071	ddb1	100	91.404	ENSCJAG00000019319	DDB1	100	91.404	Callithrix_jacchus
ENSMALG00000014071	ddb1	100	91.491	ENSCAFG00000016264	DDB1	100	91.491	Canis_familiaris
ENSMALG00000014071	ddb1	94	91.721	ENSCAFG00020012722	DDB1	99	91.721	Canis_lupus_dingo
ENSMALG00000014071	ddb1	100	91.404	ENSCHIG00000014969	DDB1	100	91.404	Capra_hircus
ENSMALG00000014071	ddb1	100	91.053	ENSTSYG00000008027	DDB1	100	91.053	Carlito_syrichta
ENSMALG00000014071	ddb1	98	91.332	ENSCAPG00000010786	DDB1	100	91.332	Cavia_aperea
ENSMALG00000014071	ddb1	100	91.316	ENSCPOG00000009956	DDB1	100	91.316	Cavia_porcellus
ENSMALG00000014071	ddb1	100	91.404	ENSCCAG00000035883	DDB1	100	91.404	Cebus_capucinus
ENSMALG00000014071	ddb1	100	88.976	ENSCATG00000044495	DDB1	100	88.976	Cercocebus_atys
ENSMALG00000014071	ddb1	100	91.404	ENSCLAG00000004126	DDB1	100	91.404	Chinchilla_lanigera
ENSMALG00000014071	ddb1	100	91.404	ENSCSAG00000006392	DDB1	100	91.404	Chlorocebus_sabaeus
ENSMALG00000014071	ddb1	88	84.848	ENSCHOG00000011377	DDB1	90	84.848	Choloepus_hoffmanni
ENSMALG00000014071	ddb1	100	91.228	ENSCPBG00000017728	DDB1	100	91.228	Chrysemys_picta_bellii
ENSMALG00000014071	ddb1	100	61.372	ENSCING00000007437	-	100	61.372	Ciona_intestinalis
ENSMALG00000014071	ddb1	94	60.369	ENSCSAVG00000004783	-	100	60.369	Ciona_savignyi
ENSMALG00000014071	ddb1	100	91.404	ENSCANG00000019948	DDB1	100	91.404	Colobus_angolensis_palliatus
ENSMALG00000014071	ddb1	100	91.491	ENSCGRG00001016599	Ddb1	100	91.491	Cricetulus_griseus_chok1gshd
ENSMALG00000014071	ddb1	100	91.491	ENSCGRG00000013427	Ddb1	100	91.491	Cricetulus_griseus_crigri
ENSMALG00000014071	ddb1	93	98.586	ENSCSEG00000012499	ddb1	99	96.862	Cynoglossus_semilaevis
ENSMALG00000014071	ddb1	94	97.670	ENSCVAG00000019531	ddb1	99	97.670	Cyprinodon_variegatus
ENSMALG00000014071	ddb1	100	93.188	ENSDARG00000074431	ddb1	100	93.188	Danio_rerio
ENSMALG00000014071	ddb1	94	91.721	ENSDNOG00000014884	DDB1	97	91.721	Dasypus_novemcinctus
ENSMALG00000014071	ddb1	84	95.455	ENSDORG00000000127	Ddb1	100	95.455	Dipodomys_ordii
ENSMALG00000014071	ddb1	100	60.524	FBgn0260962	pic	100	60.524	Drosophila_melanogaster
ENSMALG00000014071	ddb1	78	30.065	FBgn0024698	Cpsf160	68	30.065	Drosophila_melanogaster
ENSMALG00000014071	ddb1	71	95.276	ENSETEG00000001053	-	71	95.276	Echinops_telfairi
ENSMALG00000014071	ddb1	78	84.364	ENSEBUG00000014593	ddb1	97	84.364	Eptatretus_burgeri
ENSMALG00000014071	ddb1	100	91.491	ENSEASG00005008184	DDB1	100	91.491	Equus_asinus_asinus
ENSMALG00000014071	ddb1	100	91.491	ENSECAG00000012136	DDB1	100	91.491	Equus_caballus
ENSMALG00000014071	ddb1	85	87.710	ENSEEUG00000003194	DDB1	85	87.710	Erinaceus_europaeus
ENSMALG00000014071	ddb1	100	97.893	ENSELUG00000023868	ddb1	100	97.893	Esox_lucius
ENSMALG00000014071	ddb1	100	91.491	ENSFCAG00000029716	DDB1	100	91.491	Felis_catus
ENSMALG00000014071	ddb1	100	90.639	ENSFALG00000011981	DDB1	100	90.639	Ficedula_albicollis
ENSMALG00000014071	ddb1	100	91.404	ENSFDAG00000005128	DDB1	100	91.404	Fukomys_damarensis
ENSMALG00000014071	ddb1	90	96.645	ENSFHEG00000022133	ddb1	99	96.645	Fundulus_heteroclitus
ENSMALG00000014071	ddb1	79	98.997	ENSGMOG00000019386	ddb1	94	98.997	Gadus_morhua
ENSMALG00000014071	ddb1	100	91.140	ENSGALG00000042333	DDB1	100	91.140	Gallus_gallus
ENSMALG00000014071	ddb1	94	98.322	ENSGAFG00000013142	ddb1	99	98.322	Gambusia_affinis
ENSMALG00000014071	ddb1	96	97.525	ENSGACG00000017182	ddb1	100	97.525	Gasterosteus_aculeatus
ENSMALG00000014071	ddb1	95	91.052	ENSGAGG00000014124	DDB1	100	91.052	Gopherus_agassizii
ENSMALG00000014071	ddb1	100	91.404	ENSGGOG00000004052	DDB1	100	91.404	Gorilla_gorilla
ENSMALG00000014071	ddb1	100	98.947	ENSHBUG00000008873	ddb1	100	98.947	Haplochromis_burtoni
ENSMALG00000014071	ddb1	100	91.316	ENSHGLG00000018430	DDB1	100	91.316	Heterocephalus_glaber_female
ENSMALG00000014071	ddb1	100	90.351	ENSHGLG00100014475	DDB1	100	90.351	Heterocephalus_glaber_male
ENSMALG00000014071	ddb1	94	98.234	ENSHCOG00000018670	ddb1	98	98.234	Hippocampus_comes
ENSMALG00000014071	ddb1	100	96.667	ENSIPUG00000005612	DDB1	100	96.667	Ictalurus_punctatus
ENSMALG00000014071	ddb1	100	91.404	ENSSTOG00000007552	DDB1	100	91.404	Ictidomys_tridecemlineatus
ENSMALG00000014071	ddb1	100	91.316	ENSJJAG00000017769	Ddb1	100	91.316	Jaculus_jaculus
ENSMALG00000014071	ddb1	94	98.322	ENSKMAG00000002315	ddb1	99	98.322	Kryptolebias_marmoratus
ENSMALG00000014071	ddb1	84	99.272	ENSLBEG00000017065	ddb1	99	99.272	Labrus_bergylta
ENSMALG00000014071	ddb1	100	90.806	ENSLACG00000017611	DDB1	100	90.806	Latimeria_chalumnae
ENSMALG00000014071	ddb1	92	88.432	ENSLOCG00000000012	ddb1	100	88.432	Lepisosteus_oculatus
ENSMALG00000014071	ddb1	100	91.316	ENSLAFG00000011513	DDB1	100	91.316	Loxodonta_africana
ENSMALG00000014071	ddb1	100	91.404	ENSMFAG00000042035	DDB1	100	91.404	Macaca_fascicularis
ENSMALG00000014071	ddb1	99	91.424	ENSMMUG00000002691	DDB1	100	90.789	Macaca_mulatta
ENSMALG00000014071	ddb1	100	91.404	ENSMNEG00000031559	DDB1	100	91.404	Macaca_nemestrina
ENSMALG00000014071	ddb1	100	91.404	ENSMLEG00000044136	DDB1	100	91.404	Mandrillus_leucophaeus
ENSMALG00000014071	ddb1	100	99.561	ENSMAMG00000014372	ddb1	100	99.561	Mastacembelus_armatus
ENSMALG00000014071	ddb1	100	98.860	ENSMZEG00005013835	ddb1	100	98.860	Maylandia_zebra
ENSMALG00000014071	ddb1	94	90.317	ENSMGAG00000004990	DDB1	100	90.317	Meleagris_gallopavo
ENSMALG00000014071	ddb1	100	91.491	ENSMAUG00000012926	Ddb1	100	91.491	Mesocricetus_auratus
ENSMALG00000014071	ddb1	100	91.579	ENSMICG00000013703	DDB1	100	91.579	Microcebus_murinus
ENSMALG00000014071	ddb1	100	91.404	ENSMOCG00000020499	Ddb1	100	91.404	Microtus_ochrogaster
ENSMALG00000014071	ddb1	86	99.388	ENSMMOG00000001758	ddb1	99	99.388	Mola_mola
ENSMALG00000014071	ddb1	100	82.612	ENSMODG00000020353	DDB1	100	82.612	Monodelphis_domestica
ENSMALG00000014071	ddb1	100	91.491	MGP_CAROLIEiJ_G0022695	Ddb1	100	91.491	Mus_caroli
ENSMALG00000014071	ddb1	100	91.579	ENSMUSG00000024740	Ddb1	100	91.579	Mus_musculus
ENSMALG00000014071	ddb1	100	91.491	MGP_PahariEiJ_G0014189	Ddb1	100	91.491	Mus_pahari
ENSMALG00000014071	ddb1	100	91.579	MGP_SPRETEiJ_G0023609	Ddb1	100	91.579	Mus_spretus
ENSMALG00000014071	ddb1	100	88.421	ENSMPUG00000014200	DDB1	100	88.421	Mustela_putorius_furo
ENSMALG00000014071	ddb1	100	91.579	ENSMLUG00000013232	DDB1	100	91.579	Myotis_lucifugus
ENSMALG00000014071	ddb1	100	91.404	ENSNGAG00000009384	Ddb1	100	91.404	Nannospalax_galili
ENSMALG00000014071	ddb1	100	99.035	ENSNBRG00000019581	ddb1	100	99.035	Neolamprologus_brichardi
ENSMALG00000014071	ddb1	100	88.542	ENSNLEG00000002022	DDB1	100	88.542	Nomascus_leucogenys
ENSMALG00000014071	ddb1	90	94.014	ENSMEUG00000001099	DDB1	93	94.014	Notamacropus_eugenii
ENSMALG00000014071	ddb1	90	82.832	ENSOPRG00000008254	DDB1	90	82.832	Ochotona_princeps
ENSMALG00000014071	ddb1	100	91.491	ENSODEG00000002419	DDB1	100	91.491	Octodon_degus
ENSMALG00000014071	ddb1	100	98.860	ENSONIG00000005804	ddb1	100	98.860	Oreochromis_niloticus
ENSMALG00000014071	ddb1	91	91.182	ENSOANG00000004897	DDB1	100	91.182	Ornithorhynchus_anatinus
ENSMALG00000014071	ddb1	100	91.404	ENSOCUG00000001667	DDB1	100	91.404	Oryctolagus_cuniculus
ENSMALG00000014071	ddb1	96	96.425	ENSORLG00000001399	ddb1	98	97.695	Oryzias_latipes
ENSMALG00000014071	ddb1	96	96.334	ENSORLG00020001277	ddb1	97	96.334	Oryzias_latipes_hni
ENSMALG00000014071	ddb1	94	97.581	ENSORLG00015002080	ddb1	99	97.581	Oryzias_latipes_hsok
ENSMALG00000014071	ddb1	96	96.080	ENSOMEG00000006181	ddb1	99	96.080	Oryzias_melastigma
ENSMALG00000014071	ddb1	100	91.579	ENSOGAG00000016103	DDB1	100	91.579	Otolemur_garnettii
ENSMALG00000014071	ddb1	99	91.630	ENSOARG00000011716	DDB1	98	91.630	Ovis_aries
ENSMALG00000014071	ddb1	100	91.404	ENSPPAG00000035343	DDB1	100	91.404	Pan_paniscus
ENSMALG00000014071	ddb1	100	91.491	ENSPPRG00000013300	DDB1	100	91.491	Panthera_pardus
ENSMALG00000014071	ddb1	98	91.510	ENSPTIG00000006909	DDB1	98	91.510	Panthera_tigris_altaica
ENSMALG00000014071	ddb1	100	91.404	ENSPTRG00000003737	DDB1	100	91.404	Pan_troglodytes
ENSMALG00000014071	ddb1	100	91.404	ENSPANG00000000242	DDB1	100	91.404	Papio_anubis
ENSMALG00000014071	ddb1	94	96.735	ENSPKIG00000019213	ddb1	94	96.735	Paramormyrops_kingsleyae
ENSMALG00000014071	ddb1	98	90.658	ENSPSIG00000013275	DDB1	100	90.658	Pelodiscus_sinensis
ENSMALG00000014071	ddb1	86	98.980	ENSPMGG00000021179	ddb1	99	98.980	Periophthalmus_magnuspinnatus
ENSMALG00000014071	ddb1	100	91.491	ENSPEMG00000012241	Ddb1	100	91.491	Peromyscus_maniculatus_bairdii
ENSMALG00000014071	ddb1	89	86.739	ENSPMAG00000008479	ddb1	100	86.739	Petromyzon_marinus
ENSMALG00000014071	ddb1	100	91.667	ENSPCIG00000002643	DDB1	100	91.667	Phascolarctos_cinereus
ENSMALG00000014071	ddb1	100	98.335	ENSPFOG00000002768	ddb1	100	98.335	Poecilia_formosa
ENSMALG00000014071	ddb1	100	98.158	ENSPLAG00000017227	ddb1	100	98.158	Poecilia_latipinna
ENSMALG00000014071	ddb1	100	98.158	ENSPMEG00000011398	ddb1	100	98.158	Poecilia_mexicana
ENSMALG00000014071	ddb1	94	98.419	ENSPREG00000004440	ddb1	98	98.419	Poecilia_reticulata
ENSMALG00000014071	ddb1	100	87.162	ENSPPYG00000003193	DDB1	100	87.162	Pongo_abelii
ENSMALG00000014071	ddb1	85	89.403	ENSPCAG00000011040	DDB1	85	89.403	Procavia_capensis
ENSMALG00000014071	ddb1	100	90.368	ENSPCOG00000015176	DDB1	100	90.368	Propithecus_coquereli
ENSMALG00000014071	ddb1	100	91.316	ENSPVAG00000003847	DDB1	100	91.316	Pteropus_vampyrus
ENSMALG00000014071	ddb1	94	97.204	ENSPNAG00000006635	ddb1	97	97.204	Pygocentrus_nattereri
ENSMALG00000014071	ddb1	100	91.579	ENSRNOG00000020715	Ddb1	100	91.579	Rattus_norvegicus
ENSMALG00000014071	ddb1	100	91.404	ENSRBIG00000033611	DDB1	100	91.404	Rhinopithecus_bieti
ENSMALG00000014071	ddb1	100	91.404	ENSRROG00000041407	DDB1	100	91.404	Rhinopithecus_roxellana
ENSMALG00000014071	ddb1	100	91.491	ENSSBOG00000019775	DDB1	100	91.491	Saimiri_boliviensis_boliviensis
ENSMALG00000014071	ddb1	94	89.159	ENSSHAG00000011600	DDB1	100	89.159	Sarcophilus_harrisii
ENSMALG00000014071	ddb1	94	96.744	ENSSFOG00015011151	ddb1	97	96.744	Scleropages_formosus
ENSMALG00000014071	ddb1	100	99.035	ENSSMAG00000009495	ddb1	100	99.035	Scophthalmus_maximus
ENSMALG00000014071	ddb1	100	99.474	ENSSDUG00000004642	ddb1	100	99.474	Seriola_dumerili
ENSMALG00000014071	ddb1	100	99.474	ENSSLDG00000015804	ddb1	100	99.474	Seriola_lalandi_dorsalis
ENSMALG00000014071	ddb1	70	94.340	ENSSARG00000003290	-	72	94.340	Sorex_araneus
ENSMALG00000014071	ddb1	100	91.140	ENSSPUG00000019338	DDB1	100	91.140	Sphenodon_punctatus
ENSMALG00000014071	ddb1	94	99.256	ENSSPAG00000009888	ddb1	99	99.256	Stegastes_partitus
ENSMALG00000014071	ddb1	100	90.526	ENSSSCG00000013094	DDB1	100	90.526	Sus_scrofa
ENSMALG00000014071	ddb1	100	90.702	ENSTGUG00000006414	DDB1	100	90.702	Taeniopygia_guttata
ENSMALG00000014071	ddb1	94	97.577	ENSTRUG00000016682	ddb1	98	97.577	Takifugu_rubripes
ENSMALG00000014071	ddb1	88	92.615	ENSTNIG00000009565	ddb1	99	92.615	Tetraodon_nigroviridis
ENSMALG00000014071	ddb1	92	85.770	ENSTTRG00000011055	DDB1	94	85.770	Tursiops_truncatus
ENSMALG00000014071	ddb1	94	91.721	ENSUAMG00000017793	DDB1	93	91.721	Ursus_americanus
ENSMALG00000014071	ddb1	94	91.721	ENSUMAG00000011788	DDB1	98	91.721	Ursus_maritimus
ENSMALG00000014071	ddb1	90	86.891	ENSVPAG00000007963	DDB1	92	86.891	Vicugna_pacos
ENSMALG00000014071	ddb1	100	91.491	ENSVVUG00000004987	DDB1	100	91.491	Vulpes_vulpes
ENSMALG00000014071	ddb1	100	88.549	ENSXETG00000008820	ddb1	100	88.549	Xenopus_tropicalis
ENSMALG00000014071	ddb1	86	98.469	ENSXCOG00000013956	ddb1	99	98.469	Xiphophorus_couchianus
ENSMALG00000014071	ddb1	94	98.322	ENSXMAG00000000022	ddb1	99	98.322	Xiphophorus_maculatus