EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000014239 (Gene tree)
Gene ID: 109954801
Gene Symbol: clp1
Alias: fa28a12|wu:fa28a12
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 4181 bases
Position: chrKV884690.1:8054400-8058580
Accession: 109954801
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000020361	Clp1	PF06807.14	2.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000020760	-	3299	XM_020590398	ENSMALP00000020361	441 (aa)	XP_020446054	UPI0009B2E792

Gene Model

Click here to download ENSMALG00000014239's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000014239's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000014239	clp1	99	75.172	ENSG00000172409	CLP1	99	75.172	Homo_sapiens
ENSMALG00000014239	clp1	100	95.918	ENSAPOG00000008242	clp1	100	95.918	Acanthochromis_polyacanthus
ENSMALG00000014239	clp1	99	74.943	ENSAMEG00000014551	CLP1	99	74.943	Ailuropoda_melanoleuca
ENSMALG00000014239	clp1	100	95.692	ENSACIG00000006310	clp1	99	95.692	Amphilophus_citrinellus
ENSMALG00000014239	clp1	100	96.372	ENSAOCG00000010681	clp1	100	96.372	Amphiprion_ocellaris
ENSMALG00000014239	clp1	100	96.372	ENSAPEG00000012165	clp1	99	97.424	Amphiprion_percula
ENSMALG00000014239	clp1	100	95.465	ENSATEG00000012374	clp1	100	95.465	Anabas_testudineus
ENSMALG00000014239	clp1	96	76.415	ENSACAG00000007139	CLP1	98	76.415	Anolis_carolinensis
ENSMALG00000014239	clp1	99	75.172	ENSANAG00000034935	CLP1	99	75.172	Aotus_nancymaae
ENSMALG00000014239	clp1	100	95.918	ENSACLG00000013573	clp1	100	95.918	Astatotilapia_calliptera
ENSMALG00000014239	clp1	95	88.679	ENSAMXG00000014194	clp1	98	88.679	Astyanax_mexicanus
ENSMALG00000014239	clp1	99	74.943	ENSBTAG00000006493	CLP1	99	74.943	Bos_taurus
ENSMALG00000014239	clp1	94	47.506	WBGene00010304	clpf-1	96	47.506	Caenorhabditis_elegans
ENSMALG00000014239	clp1	99	75.172	ENSCJAG00000008748	CLP1	99	75.172	Callithrix_jacchus
ENSMALG00000014239	clp1	99	74.943	ENSCAFG00000007815	CLP1	99	74.943	Canis_familiaris
ENSMALG00000014239	clp1	99	74.943	ENSCAFG00020000903	CLP1	99	74.943	Canis_lupus_dingo
ENSMALG00000014239	clp1	99	75.632	ENSCHIG00000023497	CLP1	99	75.632	Capra_hircus
ENSMALG00000014239	clp1	99	75.172	ENSTSYG00000006824	CLP1	99	75.172	Carlito_syrichta
ENSMALG00000014239	clp1	99	75.172	ENSCAPG00000009703	CLP1	99	75.172	Cavia_aperea
ENSMALG00000014239	clp1	96	76.415	ENSCPOG00000012554	CLP1	99	76.415	Cavia_porcellus
ENSMALG00000014239	clp1	99	74.943	ENSCCAG00000031957	CLP1	99	74.943	Cebus_capucinus
ENSMALG00000014239	clp1	99	75.172	ENSCATG00000044628	CLP1	99	75.172	Cercocebus_atys
ENSMALG00000014239	clp1	99	75.172	ENSCLAG00000004094	CLP1	99	75.172	Chinchilla_lanigera
ENSMALG00000014239	clp1	99	75.172	ENSCSAG00000005994	CLP1	99	75.172	Chlorocebus_sabaeus
ENSMALG00000014239	clp1	98	74.365	ENSCPBG00000016843	CLP1	100	74.365	Chrysemys_picta_bellii
ENSMALG00000014239	clp1	96	61.939	ENSCING00000003779	-	97	61.939	Ciona_intestinalis
ENSMALG00000014239	clp1	95	62.679	ENSCSAVG00000003437	-	96	62.679	Ciona_savignyi
ENSMALG00000014239	clp1	99	75.172	ENSCANG00000034335	CLP1	99	75.172	Colobus_angolensis_palliatus
ENSMALG00000014239	clp1	98	74.596	ENSCGRG00001002227	CLP1	100	74.596	Cricetulus_griseus_chok1gshd
ENSMALG00000014239	clp1	98	74.596	ENSCGRG00000004328	CLP1	100	74.596	Cricetulus_griseus_crigri
ENSMALG00000014239	clp1	100	92.063	ENSCSEG00000008614	clp1	100	92.063	Cynoglossus_semilaevis
ENSMALG00000014239	clp1	100	95.238	ENSCVAG00000020101	clp1	100	95.238	Cyprinodon_variegatus
ENSMALG00000014239	clp1	100	84.529	ENSDARG00000063663	clp1	100	84.978	Danio_rerio
ENSMALG00000014239	clp1	98	74.596	ENSDNOG00000042415	CLP1	90	74.596	Dasypus_novemcinctus
ENSMALG00000014239	clp1	99	75.172	ENSDORG00000014685	Clp1	99	75.172	Dipodomys_ordii
ENSMALG00000014239	clp1	95	54.632	FBgn0033842	cbc	97	54.632	Drosophila_melanogaster
ENSMALG00000014239	clp1	99	75.172	ENSETEG00000003009	CLP1	99	75.172	Echinops_telfairi
ENSMALG00000014239	clp1	98	64.501	ENSEBUG00000011648	clp1	99	64.501	Eptatretus_burgeri
ENSMALG00000014239	clp1	99	75.402	ENSEASG00005002093	CLP1	99	75.402	Equus_asinus_asinus
ENSMALG00000014239	clp1	99	75.402	ENSECAG00000011597	CLP1	99	75.402	Equus_caballus
ENSMALG00000014239	clp1	99	74.713	ENSEEUG00000012771	CLP1	99	74.713	Erinaceus_europaeus
ENSMALG00000014239	clp1	100	86.099	ENSELUG00000024048	clp1	100	86.099	Esox_lucius
ENSMALG00000014239	clp1	99	75.172	ENSFCAG00000006633	CLP1	99	75.172	Felis_catus
ENSMALG00000014239	clp1	98	75.058	ENSFALG00000011145	CLP1	100	75.058	Ficedula_albicollis
ENSMALG00000014239	clp1	99	75.172	ENSFDAG00000000234	CLP1	99	75.172	Fukomys_damarensis
ENSMALG00000014239	clp1	100	94.785	ENSFHEG00000014760	CLP1	100	94.785	Fundulus_heteroclitus
ENSMALG00000014239	clp1	100	88.889	ENSGMOG00000019340	clp1	100	88.889	Gadus_morhua
ENSMALG00000014239	clp1	98	74.827	ENSGALG00000007370	CLP1	100	74.827	Gallus_gallus
ENSMALG00000014239	clp1	100	95.011	ENSGAFG00000003020	clp1	100	95.011	Gambusia_affinis
ENSMALG00000014239	clp1	100	94.558	ENSGACG00000017832	clp1	100	94.558	Gasterosteus_aculeatus
ENSMALG00000014239	clp1	98	74.365	ENSGAGG00000013279	CLP1	100	74.365	Gopherus_agassizii
ENSMALG00000014239	clp1	99	75.172	ENSGGOG00000023006	CLP1	99	75.172	Gorilla_gorilla
ENSMALG00000014239	clp1	100	96.145	ENSHBUG00000010436	clp1	100	96.145	Haplochromis_burtoni
ENSMALG00000014239	clp1	99	75.172	ENSHGLG00000009914	CLP1	99	75.172	Heterocephalus_glaber_female
ENSMALG00000014239	clp1	99	75.172	ENSHGLG00100006105	CLP1	99	75.172	Heterocephalus_glaber_male
ENSMALG00000014239	clp1	100	94.785	ENSHCOG00000010072	clp1	100	94.785	Hippocampus_comes
ENSMALG00000014239	clp1	100	84.633	ENSIPUG00000016238	clp1	99	84.633	Ictalurus_punctatus
ENSMALG00000014239	clp1	99	74.943	ENSSTOG00000029257	CLP1	99	74.943	Ictidomys_tridecemlineatus
ENSMALG00000014239	clp1	99	74.713	ENSJJAG00000023691	Clp1	99	74.713	Jaculus_jaculus
ENSMALG00000014239	clp1	100	95.011	ENSKMAG00000011990	clp1	100	95.011	Kryptolebias_marmoratus
ENSMALG00000014239	clp1	100	95.692	ENSLBEG00000010201	clp1	100	95.692	Labrus_bergylta
ENSMALG00000014239	clp1	96	75.000	ENSLACG00000003160	CLP1	98	75.000	Latimeria_chalumnae
ENSMALG00000014239	clp1	71	86.957	ENSLOCG00000008074	clp1	100	86.957	Lepisosteus_oculatus
ENSMALG00000014239	clp1	99	74.943	ENSLAFG00000014907	CLP1	99	74.943	Loxodonta_africana
ENSMALG00000014239	clp1	99	75.172	ENSMFAG00000046074	CLP1	99	75.172	Macaca_fascicularis
ENSMALG00000014239	clp1	99	74.943	ENSMMUG00000038007	CLP1	99	74.943	Macaca_mulatta
ENSMALG00000014239	clp1	99	75.172	ENSMNEG00000000259	CLP1	99	75.172	Macaca_nemestrina
ENSMALG00000014239	clp1	99	75.172	ENSMLEG00000043556	CLP1	99	75.172	Mandrillus_leucophaeus
ENSMALG00000014239	clp1	100	96.825	ENSMAMG00000002149	clp1	100	96.825	Mastacembelus_armatus
ENSMALG00000014239	clp1	100	95.918	ENSMZEG00005002850	clp1	100	95.918	Maylandia_zebra
ENSMALG00000014239	clp1	98	74.827	ENSMGAG00000009643	CLP1	100	74.827	Meleagris_gallopavo
ENSMALG00000014239	clp1	98	74.596	ENSMAUG00000016261	Clp1	100	74.596	Mesocricetus_auratus
ENSMALG00000014239	clp1	99	74.943	ENSMICG00000004895	CLP1	99	74.943	Microcebus_murinus
ENSMALG00000014239	clp1	98	74.827	ENSMOCG00000005498	Clp1	100	74.827	Microtus_ochrogaster
ENSMALG00000014239	clp1	100	94.104	ENSMMOG00000003229	clp1	100	94.104	Mola_mola
ENSMALG00000014239	clp1	95	76.905	ENSMODG00000020107	-	97	76.905	Monodelphis_domestica
ENSMALG00000014239	clp1	95	76.905	ENSMODG00000024148	-	97	76.905	Monodelphis_domestica
ENSMALG00000014239	clp1	98	74.596	MGP_CAROLIEiJ_G0023726	Clp1	100	74.596	Mus_caroli
ENSMALG00000014239	clp1	98	74.596	ENSMUSG00000027079	Clp1	100	74.596	Mus_musculus
ENSMALG00000014239	clp1	98	74.365	MGP_PahariEiJ_G0025177	Clp1	100	74.365	Mus_pahari
ENSMALG00000014239	clp1	98	74.596	MGP_SPRETEiJ_G0024646	Clp1	100	74.596	Mus_spretus
ENSMALG00000014239	clp1	99	74.943	ENSMPUG00000000268	CLP1	99	74.943	Mustela_putorius_furo
ENSMALG00000014239	clp1	99	75.402	ENSMLUG00000007904	CLP1	99	75.402	Myotis_lucifugus
ENSMALG00000014239	clp1	99	74.713	ENSNGAG00000006165	Clp1	99	74.713	Nannospalax_galili
ENSMALG00000014239	clp1	100	95.918	ENSNBRG00000005225	clp1	100	95.918	Neolamprologus_brichardi
ENSMALG00000014239	clp1	81	70.312	ENSNLEG00000012809	-	99	70.312	Nomascus_leucogenys
ENSMALG00000014239	clp1	98	74.885	ENSMEUG00000010949	CLP1	100	74.885	Notamacropus_eugenii
ENSMALG00000014239	clp1	69	78.218	ENSOPRG00000007329	CLP1	100	78.218	Ochotona_princeps
ENSMALG00000014239	clp1	99	75.172	ENSODEG00000011410	CLP1	99	75.172	Octodon_degus
ENSMALG00000014239	clp1	100	95.918	ENSONIG00000005089	clp1	100	95.918	Oreochromis_niloticus
ENSMALG00000014239	clp1	99	74.943	ENSOCUG00000007045	CLP1	99	74.943	Oryctolagus_cuniculus
ENSMALG00000014239	clp1	100	94.331	ENSORLG00000003647	clp1	100	94.331	Oryzias_latipes
ENSMALG00000014239	clp1	100	94.104	ENSORLG00020016676	clp1	100	94.104	Oryzias_latipes_hni
ENSMALG00000014239	clp1	100	94.331	ENSORLG00015019484	clp1	100	94.331	Oryzias_latipes_hsok
ENSMALG00000014239	clp1	100	95.011	ENSOMEG00000021303	clp1	100	95.011	Oryzias_melastigma
ENSMALG00000014239	clp1	99	75.172	ENSOGAG00000004508	CLP1	99	75.172	Otolemur_garnettii
ENSMALG00000014239	clp1	98	74.424	ENSOARG00000010145	CLP1	99	74.424	Ovis_aries
ENSMALG00000014239	clp1	99	75.172	ENSPPAG00000041519	CLP1	99	75.172	Pan_paniscus
ENSMALG00000014239	clp1	99	75.172	ENSPPRG00000006135	CLP1	99	75.172	Panthera_pardus
ENSMALG00000014239	clp1	99	75.172	ENSPTIG00000015866	CLP1	99	75.172	Panthera_tigris_altaica
ENSMALG00000014239	clp1	99	75.172	ENSPTRG00000047318	CLP1	99	75.172	Pan_troglodytes
ENSMALG00000014239	clp1	99	74.943	ENSPANG00000017078	CLP1	98	74.943	Papio_anubis
ENSMALG00000014239	clp1	100	85.843	ENSPKIG00000007697	clp1	100	85.843	Paramormyrops_kingsleyae
ENSMALG00000014239	clp1	93	71.463	ENSPSIG00000005468	CLP1	100	71.463	Pelodiscus_sinensis
ENSMALG00000014239	clp1	100	92.290	ENSPMGG00000012171	clp1	100	92.290	Periophthalmus_magnuspinnatus
ENSMALG00000014239	clp1	98	74.827	ENSPEMG00000011213	-	100	74.827	Peromyscus_maniculatus_bairdii
ENSMALG00000014239	clp1	98	66.667	ENSPMAG00000006707	clp1	99	66.667	Petromyzon_marinus
ENSMALG00000014239	clp1	98	75.058	ENSPCIG00000011899	CLP1	99	75.058	Phascolarctos_cinereus
ENSMALG00000014239	clp1	100	95.465	ENSPFOG00000008169	clp1	100	95.465	Poecilia_formosa
ENSMALG00000014239	clp1	100	95.465	ENSPLAG00000022388	clp1	100	95.465	Poecilia_latipinna
ENSMALG00000014239	clp1	100	95.465	ENSPMEG00000021088	clp1	100	95.465	Poecilia_mexicana
ENSMALG00000014239	clp1	100	95.465	ENSPREG00000017802	clp1	100	95.465	Poecilia_reticulata
ENSMALG00000014239	clp1	52	75.109	ENSPPYG00000003266	-	100	75.109	Pongo_abelii
ENSMALG00000014239	clp1	99	74.943	ENSPCOG00000000360	CLP1	99	74.943	Propithecus_coquereli
ENSMALG00000014239	clp1	99	74.943	ENSPVAG00000016270	CLP1	99	74.943	Pteropus_vampyrus
ENSMALG00000014239	clp1	100	96.145	ENSPNYG00000017274	clp1	99	96.145	Pundamilia_nyererei
ENSMALG00000014239	clp1	95	89.835	ENSPNAG00000026460	clp1	100	86.384	Pygocentrus_nattereri
ENSMALG00000014239	clp1	98	74.596	ENSRNOG00000007416	Clp1	100	74.596	Rattus_norvegicus
ENSMALG00000014239	clp1	99	75.172	ENSRBIG00000018191	CLP1	99	75.172	Rhinopithecus_bieti
ENSMALG00000014239	clp1	99	75.172	ENSRROG00000039265	CLP1	99	75.172	Rhinopithecus_roxellana
ENSMALG00000014239	clp1	99	75.172	ENSSBOG00000032517	-	99	75.172	Saimiri_boliviensis_boliviensis
ENSMALG00000014239	clp1	94	62.560	ENSSBOG00000010558	-	93	62.560	Saimiri_boliviensis_boliviensis
ENSMALG00000014239	clp1	95	76.960	ENSSHAG00000015695	CLP1	97	76.960	Sarcophilus_harrisii
ENSMALG00000014239	clp1	100	84.106	ENSSFOG00015000628	clp1	100	84.910	Scleropages_formosus
ENSMALG00000014239	clp1	100	95.692	ENSSMAG00000019423	clp1	99	95.692	Scophthalmus_maximus
ENSMALG00000014239	clp1	100	96.599	ENSSDUG00000014495	clp1	100	96.599	Seriola_dumerili
ENSMALG00000014239	clp1	100	96.372	ENSSLDG00000000937	clp1	100	96.372	Seriola_lalandi_dorsalis
ENSMALG00000014239	clp1	52	75.000	ENSSARG00000002459	CLP1	100	75.000	Sorex_araneus
ENSMALG00000014239	clp1	98	73.903	ENSSPUG00000016811	CLP1	100	73.903	Sphenodon_punctatus
ENSMALG00000014239	clp1	100	96.145	ENSSPAG00000016052	clp1	100	96.145	Stegastes_partitus
ENSMALG00000014239	clp1	99	74.943	ENSSSCG00000031442	CLP1	99	74.943	Sus_scrofa
ENSMALG00000014239	clp1	98	74.827	ENSTGUG00000007002	CLP1	100	74.827	Taeniopygia_guttata
ENSMALG00000014239	clp1	100	91.383	ENSTRUG00000012602	clp1	100	91.383	Takifugu_rubripes
ENSMALG00000014239	clp1	100	90.930	ENSTNIG00000013125	clp1	100	90.930	Tetraodon_nigroviridis
ENSMALG00000014239	clp1	99	74.483	ENSTBEG00000009975	CLP1	99	74.483	Tupaia_belangeri
ENSMALG00000014239	clp1	99	74.943	ENSTTRG00000002096	CLP1	99	74.943	Tursiops_truncatus
ENSMALG00000014239	clp1	99	74.943	ENSUAMG00000011388	CLP1	99	74.943	Ursus_americanus
ENSMALG00000014239	clp1	99	74.943	ENSUMAG00000018317	CLP1	99	74.943	Ursus_maritimus
ENSMALG00000014239	clp1	100	74.150	ENSVVUG00000017138	CLP1	99	74.150	Vulpes_vulpes
ENSMALG00000014239	clp1	100	70.655	ENSXETG00000007088	clp1	100	70.880	Xenopus_tropicalis
ENSMALG00000014239	clp1	100	95.238	ENSXCOG00000002287	clp1	100	95.238	Xiphophorus_couchianus
ENSMALG00000014239	clp1	100	95.238	ENSXMAG00000009783	clp1	100	95.238	Xiphophorus_maculatus