EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000014511 (Gene tree)
Gene ID: 109967458
Gene Symbol: lsm7
Alias: fj64g01|wu:fj64g01|zgc:66405
Full Name: LSM7 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 3223 bases
Position: chrKV884817.1:277444-280666
Accession: 109967458
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000020750	LSM	PF01423.22	1.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000021153	-	1843	XM_020613035	ENSMALP00000020750	130 (aa)	XP_020468691	UPI0009B4A4F6

Gene Model

Click here to download ENSMALG00000014511's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03018	RNA degradation	KEGG
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000014511's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000014511	lsm7	79	94.175	ENSG00000130332	LSM7	100	95.918	Homo_sapiens
ENSMALG00000014511	lsm7	75	96.907	ENSAPOG00000015573	lsm7	84	96.907	Acanthochromis_polyacanthus
ENSMALG00000014511	lsm7	79	91.262	ENSAMEG00000005484	LSM7	100	91.262	Ailuropoda_melanoleuca
ENSMALG00000014511	lsm7	75	100.000	ENSACIG00000006498	lsm7	78	100.000	Amphilophus_citrinellus
ENSMALG00000014511	lsm7	78	99.010	ENSAOCG00000001077	lsm7	92	99.010	Amphiprion_ocellaris
ENSMALG00000014511	lsm7	78	99.010	ENSAPEG00000024447	lsm7	92	99.010	Amphiprion_percula
ENSMALG00000014511	lsm7	79	99.029	ENSAPEG00000000694	lsm7	100	99.029	Amphiprion_percula
ENSMALG00000014511	lsm7	79	99.029	ENSATEG00000008557	lsm7	100	99.029	Anabas_testudineus
ENSMALG00000014511	lsm7	79	94.175	ENSANAG00000037196	-	100	94.175	Aotus_nancymaae
ENSMALG00000014511	lsm7	79	85.437	ENSANAG00000022222	-	100	85.437	Aotus_nancymaae
ENSMALG00000014511	lsm7	79	100.000	ENSACLG00000021021	lsm7	100	100.000	Astatotilapia_calliptera
ENSMALG00000014511	lsm7	79	97.087	ENSAMXG00000037622	lsm7	100	97.087	Astyanax_mexicanus
ENSMALG00000014511	lsm7	79	94.175	ENSBTAG00000004521	LSM7	100	94.175	Bos_taurus
ENSMALG00000014511	lsm7	77	58.000	WBGene00003081	lsm-7	96	58.000	Caenorhabditis_elegans
ENSMALG00000014511	lsm7	78	93.069	ENSCAFG00000019409	LSM7	98	93.069	Canis_familiaris
ENSMALG00000014511	lsm7	98	78.195	ENSCAFG00020018168	LSM7	98	78.195	Canis_lupus_dingo
ENSMALG00000014511	lsm7	79	92.233	ENSCHIG00000023663	LSM7	100	92.233	Capra_hircus
ENSMALG00000014511	lsm7	55	95.775	ENSCAPG00000014534	LSM7	100	95.775	Cavia_aperea
ENSMALG00000014511	lsm7	79	94.175	ENSCPOG00000014025	LSM7	100	94.175	Cavia_porcellus
ENSMALG00000014511	lsm7	78	94.059	ENSCCAG00000035456	LSM7	99	94.059	Cebus_capucinus
ENSMALG00000014511	lsm7	79	94.175	ENSCATG00000023543	LSM7	100	94.175	Cercocebus_atys
ENSMALG00000014511	lsm7	79	94.175	ENSCLAG00000011635	LSM7	100	94.175	Chinchilla_lanigera
ENSMALG00000014511	lsm7	79	94.175	ENSCSAG00000011599	LSM7	100	94.175	Chlorocebus_sabaeus
ENSMALG00000014511	lsm7	55	95.833	ENSCPBG00000021317	LSM7	77	95.833	Chrysemys_picta_bellii
ENSMALG00000014511	lsm7	74	81.250	ENSCING00000022134	-	97	81.250	Ciona_intestinalis
ENSMALG00000014511	lsm7	79	94.175	ENSCANG00000035525	LSM7	100	94.175	Colobus_angolensis_palliatus
ENSMALG00000014511	lsm7	69	83.333	ENSCGRG00001016005	-	92	83.333	Cricetulus_griseus_chok1gshd
ENSMALG00000014511	lsm7	79	93.204	ENSCGRG00001000807	-	100	93.204	Cricetulus_griseus_chok1gshd
ENSMALG00000014511	lsm7	69	83.333	ENSCGRG00000006821	-	92	83.333	Cricetulus_griseus_crigri
ENSMALG00000014511	lsm7	78	93.069	ENSCGRG00000014355	-	97	93.069	Cricetulus_griseus_crigri
ENSMALG00000014511	lsm7	82	95.283	ENSCSEG00000014900	lsm7	90	95.283	Cynoglossus_semilaevis
ENSMALG00000014511	lsm7	78	98.020	ENSCVAG00000021091	lsm7	94	98.020	Cyprinodon_variegatus
ENSMALG00000014511	lsm7	79	98.058	ENSDARG00000058328	lsm7	100	98.058	Danio_rerio
ENSMALG00000014511	lsm7	78	92.157	ENSDORG00000024460	Lsm7	100	92.157	Dipodomys_ordii
ENSMALG00000014511	lsm7	81	68.868	FBgn0261068	LSm7	96	68.868	Drosophila_melanogaster
ENSMALG00000014511	lsm7	78	91.089	ENSETEG00000012788	LSM7	99	91.089	Echinops_telfairi
ENSMALG00000014511	lsm7	79	84.466	ENSEBUG00000016992	lsm7	99	84.466	Eptatretus_burgeri
ENSMALG00000014511	lsm7	64	59.036	ENSEBUG00000010470	-	79	59.036	Eptatretus_burgeri
ENSMALG00000014511	lsm7	81	88.571	ENSECAG00000001440	LSM7	67	89.423	Equus_caballus
ENSMALG00000014511	lsm7	79	93.204	ENSFCAG00000003445	LSM7	100	93.204	Felis_catus
ENSMALG00000014511	lsm7	78	96.040	ENSFALG00000011912	LSM7	100	96.040	Ficedula_albicollis
ENSMALG00000014511	lsm7	74	94.792	ENSFDAG00000007661	LSM7	100	94.792	Fukomys_damarensis
ENSMALG00000014511	lsm7	78	98.020	ENSFHEG00000006349	lsm7	90	98.020	Fundulus_heteroclitus
ENSMALG00000014511	lsm7	79	95.146	ENSGMOG00000013320	lsm7	100	95.146	Gadus_morhua
ENSMALG00000014511	lsm7	79	98.058	ENSGAFG00000013902	lsm7	100	98.058	Gambusia_affinis
ENSMALG00000014511	lsm7	79	96.117	ENSGACG00000010390	lsm7	100	96.117	Gasterosteus_aculeatus
ENSMALG00000014511	lsm7	79	94.175	ENSGGOG00000010172	LSM7	100	94.175	Gorilla_gorilla
ENSMALG00000014511	lsm7	79	100.000	ENSHBUG00000004616	lsm7	100	100.000	Haplochromis_burtoni
ENSMALG00000014511	lsm7	79	94.175	ENSHGLG00000010587	LSM7	100	94.175	Heterocephalus_glaber_female
ENSMALG00000014511	lsm7	79	94.175	ENSHGLG00100000852	LSM7	100	94.175	Heterocephalus_glaber_male
ENSMALG00000014511	lsm7	78	100.000	ENSHCOG00000020252	lsm7	100	100.000	Hippocampus_comes
ENSMALG00000014511	lsm7	79	95.146	ENSIPUG00000024724	lsm7	100	95.146	Ictalurus_punctatus
ENSMALG00000014511	lsm7	78	94.059	ENSSTOG00000028372	LSM7	99	94.059	Ictidomys_tridecemlineatus
ENSMALG00000014511	lsm7	77	94.000	ENSJJAG00000001936	Lsm7	97	94.000	Jaculus_jaculus
ENSMALG00000014511	lsm7	79	98.058	ENSKMAG00000022151	lsm7	100	98.058	Kryptolebias_marmoratus
ENSMALG00000014511	lsm7	79	98.058	ENSLBEG00000005203	lsm7	100	98.058	Labrus_bergylta
ENSMALG00000014511	lsm7	72	95.699	ENSLACG00000015700	LSM7	100	93.204	Latimeria_chalumnae
ENSMALG00000014511	lsm7	78	96.040	ENSLOCG00000004356	lsm7	98	96.040	Lepisosteus_oculatus
ENSMALG00000014511	lsm7	78	94.059	ENSLAFG00000029302	LSM7	98	94.059	Loxodonta_africana
ENSMALG00000014511	lsm7	79	94.175	ENSMFAG00000044572	LSM7	100	94.175	Macaca_fascicularis
ENSMALG00000014511	lsm7	79	94.175	ENSMMUG00000000452	LSM7	100	94.175	Macaca_mulatta
ENSMALG00000014511	lsm7	79	94.175	ENSMNEG00000004393	LSM7	100	94.175	Macaca_nemestrina
ENSMALG00000014511	lsm7	79	94.175	ENSMLEG00000030852	LSM7	100	94.175	Mandrillus_leucophaeus
ENSMALG00000014511	lsm7	79	100.000	ENSMAMG00000005410	lsm7	100	100.000	Mastacembelus_armatus
ENSMALG00000014511	lsm7	79	100.000	ENSMZEG00005028055	lsm7	100	100.000	Maylandia_zebra
ENSMALG00000014511	lsm7	82	93.396	ENSMGAG00000000750	LSM7	91	93.396	Meleagris_gallopavo
ENSMALG00000014511	lsm7	79	93.204	ENSMAUG00000009276	Lsm7	100	93.204	Mesocricetus_auratus
ENSMALG00000014511	lsm7	79	93.204	ENSMICG00000009988	-	100	93.204	Microcebus_murinus
ENSMALG00000014511	lsm7	79	94.175	ENSMICG00000028619	-	100	94.175	Microcebus_murinus
ENSMALG00000014511	lsm7	79	93.204	ENSMOCG00000016925	Lsm7	100	93.204	Microtus_ochrogaster
ENSMALG00000014511	lsm7	79	99.029	ENSMMOG00000019645	lsm7	98	99.029	Mola_mola
ENSMALG00000014511	lsm7	79	95.146	ENSMODG00000004722	LSM7	100	95.146	Monodelphis_domestica
ENSMALG00000014511	lsm7	78	93.137	MGP_CAROLIEiJ_G0015607	Lsm7	99	93.137	Mus_caroli
ENSMALG00000014511	lsm7	78	93.137	ENSMUSG00000035215	Lsm7	99	93.137	Mus_musculus
ENSMALG00000014511	lsm7	78	93.137	MGP_PahariEiJ_G0031020	Lsm7	99	93.137	Mus_pahari
ENSMALG00000014511	lsm7	78	93.137	MGP_SPRETEiJ_G0016425	Lsm7	99	93.137	Mus_spretus
ENSMALG00000014511	lsm7	79	91.262	ENSMLUG00000013097	-	100	91.262	Myotis_lucifugus
ENSMALG00000014511	lsm7	80	86.538	ENSMLUG00000024002	-	95	86.538	Myotis_lucifugus
ENSMALG00000014511	lsm7	79	92.233	ENSNGAG00000021637	Lsm7	100	92.233	Nannospalax_galili
ENSMALG00000014511	lsm7	78	100.000	ENSNBRG00000015770	lsm7	87	100.000	Neolamprologus_brichardi
ENSMALG00000014511	lsm7	81	97.143	ENSNBRG00000001237	-	84	97.143	Neolamprologus_brichardi
ENSMALG00000014511	lsm7	79	94.175	ENSNLEG00000002265	LSM7	100	94.175	Nomascus_leucogenys
ENSMALG00000014511	lsm7	79	94.175	ENSODEG00000013590	-	100	94.175	Octodon_degus
ENSMALG00000014511	lsm7	79	87.379	ENSODEG00000018769	-	100	87.379	Octodon_degus
ENSMALG00000014511	lsm7	79	74.757	ENSODEG00000008190	-	100	74.757	Octodon_degus
ENSMALG00000014511	lsm7	82	99.057	ENSONIG00000001801	lsm7	91	99.057	Oreochromis_niloticus
ENSMALG00000014511	lsm7	79	99.029	ENSORLG00000023951	lsm7	100	99.029	Oryzias_latipes
ENSMALG00000014511	lsm7	92	86.555	ENSORLG00020022226	lsm7	100	99.029	Oryzias_latipes_hni
ENSMALG00000014511	lsm7	92	86.555	ENSORLG00015020044	lsm7	94	99.010	Oryzias_latipes_hsok
ENSMALG00000014511	lsm7	79	99.029	ENSOMEG00000012806	lsm7	100	99.029	Oryzias_melastigma
ENSMALG00000014511	lsm7	79	82.524	ENSOGAG00000024373	-	100	82.524	Otolemur_garnettii
ENSMALG00000014511	lsm7	78	92.079	ENSOGAG00000000144	-	99	92.079	Otolemur_garnettii
ENSMALG00000014511	lsm7	79	92.233	ENSOARG00000014013	LSM7	100	92.233	Ovis_aries
ENSMALG00000014511	lsm7	79	94.175	ENSPPAG00000026500	LSM7	100	94.175	Pan_paniscus
ENSMALG00000014511	lsm7	79	93.204	ENSPPRG00000008624	LSM7	100	93.204	Panthera_pardus
ENSMALG00000014511	lsm7	72	93.548	ENSPTIG00000016252	LSM7	98	93.069	Panthera_tigris_altaica
ENSMALG00000014511	lsm7	79	94.175	ENSPTRG00000010233	LSM7	100	94.175	Pan_troglodytes
ENSMALG00000014511	lsm7	79	94.175	ENSPANG00000020668	LSM7	100	94.175	Papio_anubis
ENSMALG00000014511	lsm7	79	97.087	ENSPKIG00000011325	lsm7	100	97.087	Paramormyrops_kingsleyae
ENSMALG00000014511	lsm7	78	96.040	ENSPSIG00000017149	LSM7	89	96.040	Pelodiscus_sinensis
ENSMALG00000014511	lsm7	79	99.029	ENSPMGG00000006498	lsm7	100	99.029	Periophthalmus_magnuspinnatus
ENSMALG00000014511	lsm7	79	95.146	ENSPCIG00000030454	LSM7	100	95.146	Phascolarctos_cinereus
ENSMALG00000014511	lsm7	79	95.146	ENSPFOG00000012467	lsm7	91	95.146	Poecilia_formosa
ENSMALG00000014511	lsm7	79	95.146	ENSPLAG00000000252	lsm7	94	96.078	Poecilia_latipinna
ENSMALG00000014511	lsm7	78	97.030	ENSPMEG00000000587	lsm7	94	96.078	Poecilia_mexicana
ENSMALG00000014511	lsm7	62	76.543	ENSPREG00000016718	lsm7	65	76.543	Poecilia_reticulata
ENSMALG00000014511	lsm7	92	64.706	ENSPPYG00000009348	-	79	64.706	Pongo_abelii
ENSMALG00000014511	lsm7	79	94.175	ENSPCOG00000017177	LSM7	100	94.175	Propithecus_coquereli
ENSMALG00000014511	lsm7	79	100.000	ENSPNYG00000006938	lsm7	100	100.000	Pundamilia_nyererei
ENSMALG00000014511	lsm7	79	97.087	ENSPNAG00000010141	lsm7	100	97.087	Pygocentrus_nattereri
ENSMALG00000014511	lsm7	78	94.118	ENSRNOG00000019552	Lsm7	99	94.118	Rattus_norvegicus
ENSMALG00000014511	lsm7	79	94.175	ENSRBIG00000035978	LSM7	100	94.175	Rhinopithecus_bieti
ENSMALG00000014511	lsm7	79	94.175	ENSRROG00000034044	LSM7	100	94.175	Rhinopithecus_roxellana
ENSMALG00000014511	lsm7	66	48.315	YNL147W	-	77	48.315	Saccharomyces_cerevisiae
ENSMALG00000014511	lsm7	79	94.175	ENSSBOG00000034899	LSM7	100	94.175	Saimiri_boliviensis_boliviensis
ENSMALG00000014511	lsm7	79	95.146	ENSSFOG00015006728	lsm7	100	95.146	Scleropages_formosus
ENSMALG00000014511	lsm7	78	99.010	ENSSMAG00000004195	lsm7	93	99.010	Scophthalmus_maximus
ENSMALG00000014511	lsm7	79	99.029	ENSSDUG00000001863	lsm7	100	99.029	Seriola_dumerili
ENSMALG00000014511	lsm7	79	99.029	ENSSLDG00000016339	lsm7	100	99.029	Seriola_lalandi_dorsalis
ENSMALG00000014511	lsm7	88	90.435	ENSSPAG00000015221	lsm7	100	99.029	Stegastes_partitus
ENSMALG00000014511	lsm7	78	94.059	ENSSSCG00000013463	LSM7	99	94.059	Sus_scrofa
ENSMALG00000014511	lsm7	78	96.040	ENSTGUG00000000067	LSM7	100	96.040	Taeniopygia_guttata
ENSMALG00000014511	lsm7	79	97.087	ENSTRUG00000022913	lsm7	100	97.087	Takifugu_rubripes
ENSMALG00000014511	lsm7	79	97.087	ENSTNIG00000015525	lsm7	100	97.087	Tetraodon_nigroviridis
ENSMALG00000014511	lsm7	54	82.857	ENSTBEG00000016602	LSM7	100	82.857	Tupaia_belangeri
ENSMALG00000014511	lsm7	85	85.586	ENSUAMG00000000912	LSM7	93	85.586	Ursus_americanus
ENSMALG00000014511	lsm7	72	93.548	ENSUMAG00000006556	LSM7	78	94.000	Ursus_maritimus
ENSMALG00000014511	lsm7	55	94.366	ENSVVUG00000002640	LSM7	65	94.366	Vulpes_vulpes
ENSMALG00000014511	lsm7	78	94.059	ENSXETG00000022166	lsm7	100	94.059	Xenopus_tropicalis
ENSMALG00000014511	lsm7	78	97.059	ENSXCOG00000002572	lsm7	100	97.059	Xiphophorus_couchianus
ENSMALG00000014511	lsm7	79	98.058	ENSXMAG00000018630	lsm7	100	98.058	Xiphophorus_maculatus