EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000014623 (Gene tree)
Gene ID: 109955424
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C (C1/C2)
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 8187 bases
Position: chrKV884702.1:33837-42023
Accession: 109955424
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000020892	RRM_1	PF00076.22	4.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000021296	-	2545	XM_020591563	ENSMALP00000020892	314 (aa)	XP_020447219	-

Gene Model

Click here to download ENSMALG00000014623's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000014623's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000014623	-	67	54.425	ENSMALG00000019019	-	59	55.752
ENSMALG00000014623	-	69	58.079	ENSMALG00000012952	-	76	56.828
ENSMALG00000014623	-	81	76.078	ENSMALG00000007520	-	85	76.285
ENSMALG00000014623	-	70	51.528	ENSMALG00000007071	raly	67	47.407

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000014623	-	85	49.291	ENSG00000184672	RALYL	93	78.481	Homo_sapiens
ENSMALG00000014623	-	79	84.064	ENSAPOG00000006963	hnrnpc	85	83.969	Acanthochromis_polyacanthus
ENSMALG00000014623	-	81	90.196	ENSACIG00000016568	-	83	89.804	Amphilophus_citrinellus
ENSMALG00000014623	-	81	84.047	ENSACIG00000000270	-	83	87.097	Amphilophus_citrinellus
ENSMALG00000014623	-	79	83.665	ENSAOCG00000003896	-	85	83.588	Amphiprion_ocellaris
ENSMALG00000014623	-	84	90.566	ENSAOCG00000021616	-	83	90.189	Amphiprion_ocellaris
ENSMALG00000014623	-	79	83.665	ENSAPEG00000001489	-	85	83.588	Amphiprion_percula
ENSMALG00000014623	-	84	90.566	ENSAPEG00000019962	-	85	89.811	Amphiprion_percula
ENSMALG00000014623	-	81	84.375	ENSATEG00000011734	-	85	84.411	Anabas_testudineus
ENSMALG00000014623	-	84	92.509	ENSATEG00000018006	-	83	92.135	Anabas_testudineus
ENSMALG00000014623	-	70	53.782	ENSAPLG00000015574	RALYL	80	55.085	Anas_platyrhynchos
ENSMALG00000014623	-	70	54.622	ENSACAG00000028464	RALYL	79	55.932	Anolis_carolinensis
ENSMALG00000014623	-	89	47.782	ENSANAG00000023383	RALYL	78	57.522	Aotus_nancymaae
ENSMALG00000014623	-	79	82.540	ENSACLG00000000995	-	85	82.890	Astatotilapia_calliptera
ENSMALG00000014623	-	84	88.015	ENSACLG00000005707	-	90	87.640	Astatotilapia_calliptera
ENSMALG00000014623	-	79	82.143	ENSACLG00000013636	-	87	82.510	Astatotilapia_calliptera
ENSMALG00000014623	-	83	79.389	ENSAMXG00000034915	zgc:55733	91	77.099	Astyanax_mexicanus
ENSMALG00000014623	-	66	76.923	ENSAMXG00000042946	hnrnpc	97	75.393	Astyanax_mexicanus
ENSMALG00000014623	-	89	47.782	ENSCJAG00000000402	RALYL	78	57.522	Callithrix_jacchus
ENSMALG00000014623	-	82	50.000	ENSCPOG00000012314	RALYL	79	55.745	Cavia_porcellus
ENSMALG00000014623	-	89	47.782	ENSCCAG00000025003	RALYL	77	78.481	Cebus_capucinus
ENSMALG00000014623	-	85	49.291	ENSCATG00000042145	RALYL	78	57.522	Cercocebus_atys
ENSMALG00000014623	-	70	54.468	ENSCLAG00000005228	RALYL	79	55.745	Chinchilla_lanigera
ENSMALG00000014623	-	68	53.879	ENSCHOG00000013228	RALYL	76	52.321	Choloepus_hoffmanni
ENSMALG00000014623	-	85	49.291	ENSCANG00000039144	RALYL	78	57.522	Colobus_angolensis_palliatus
ENSMALG00000014623	-	70	53.361	ENSCGRG00001009241	Ralyl	79	55.085	Cricetulus_griseus_chok1gshd
ENSMALG00000014623	-	68	77.064	ENSCSEG00000019769	-	74	77.523	Cynoglossus_semilaevis
ENSMALG00000014623	-	83	82.510	ENSCSEG00000021349	-	82	83.396	Cynoglossus_semilaevis
ENSMALG00000014623	-	88	66.192	ENSCVAG00000002797	-	86	67.054	Cyprinodon_variegatus
ENSMALG00000014623	-	84	86.090	ENSCVAG00000016981	-	81	85.338	Cyprinodon_variegatus
ENSMALG00000014623	-	83	79.008	ENSDARG00000103845	zgc:55733	93	77.606	Danio_rerio
ENSMALG00000014623	-	78	78.862	ENSDARG00000053810	hnrnpc	82	76.226	Danio_rerio
ENSMALG00000014623	-	70	53.782	ENSDORG00000003721	Ralyl	79	55.508	Dipodomys_ordii
ENSMALG00000014623	-	69	47.556	ENSEBUG00000006049	RALYL	78	46.667	Eptatretus_burgeri
ENSMALG00000014623	-	83	42.909	ENSEBUG00000012363	hnrnpc	67	47.368	Eptatretus_burgeri
ENSMALG00000014623	-	70	54.622	ENSEEUG00000007202	RALYL	80	56.596	Erinaceus_europaeus
ENSMALG00000014623	-	79	79.245	ENSELUG00000007714	-	92	78.388	Esox_lucius
ENSMALG00000014623	-	84	79.259	ENSELUG00000004132	-	91	79.259	Esox_lucius
ENSMALG00000014623	-	67	57.870	ENSFALG00000008647	RALYL	97	58.879	Ficedula_albicollis
ENSMALG00000014623	-	81	81.481	ENSFHEG00000007278	-	82	80.741	Fundulus_heteroclitus
ENSMALG00000014623	-	86	76.895	ENSFHEG00000003605	-	86	78.788	Fundulus_heteroclitus
ENSMALG00000014623	-	70	56.195	ENSGALG00000036938	RALYL	79	55.085	Gallus_gallus
ENSMALG00000014623	-	86	76.173	ENSGAFG00000020486	-	86	78.409	Gambusia_affinis
ENSMALG00000014623	-	81	87.451	ENSGAFG00000020992	-	85	84.030	Gambusia_affinis
ENSMALG00000014623	-	71	69.507	ENSGACG00000018932	-	89	69.820	Gasterosteus_aculeatus
ENSMALG00000014623	-	85	81.550	ENSGACG00000017772	-	97	86.508	Gasterosteus_aculeatus
ENSMALG00000014623	-	85	49.291	ENSGGOG00000000841	RALYL	78	57.522	Gorilla_gorilla
ENSMALG00000014623	-	84	88.390	ENSHBUG00000010527	-	84	88.015	Haplochromis_burtoni
ENSMALG00000014623	-	79	82.937	ENSHBUG00000018342	-	85	83.270	Haplochromis_burtoni
ENSMALG00000014623	-	70	54.043	ENSHGLG00000004866	RALYL	79	55.319	Heterocephalus_glaber_female
ENSMALG00000014623	-	70	54.043	ENSHGLG00100017480	RALYL	79	55.319	Heterocephalus_glaber_male
ENSMALG00000014623	-	82	81.985	ENSHCOG00000012333	hnrnpc	91	81.949	Hippocampus_comes
ENSMALG00000014623	-	83	79.389	ENSIPUG00000008666	zgc:55733	94	83.645	Ictalurus_punctatus
ENSMALG00000014623	-	82	78.210	ENSIPUG00000011271	hnrnpc	97	80.357	Ictalurus_punctatus
ENSMALG00000014623	-	70	53.782	ENSSTOG00000012583	RALYL	81	55.508	Ictidomys_tridecemlineatus
ENSMALG00000014623	-	84	87.218	ENSKMAG00000018265	-	83	87.218	Kryptolebias_marmoratus
ENSMALG00000014623	-	85	80.741	ENSKMAG00000011170	-	84	81.853	Kryptolebias_marmoratus
ENSMALG00000014623	-	87	74.386	ENSLBEG00000024418	-	86	75.096	Labrus_bergylta
ENSMALG00000014623	-	84	78.277	ENSLBEG00000006979	-	85	78.947	Labrus_bergylta
ENSMALG00000014623	-	83	88.593	ENSLBEG00000006193	-	84	87.547	Labrus_bergylta
ENSMALG00000014623	-	83	68.421	ENSLOCG00000002560	hnrnpc	91	70.149	Lepisosteus_oculatus
ENSMALG00000014623	-	85	49.291	ENSMNEG00000033288	RALYL	78	57.522	Macaca_nemestrina
ENSMALG00000014623	-	85	49.291	ENSMLEG00000038284	RALYL	78	57.522	Mandrillus_leucophaeus
ENSMALG00000014623	-	79	84.861	ENSMAMG00000012236	-	84	85.115	Mastacembelus_armatus
ENSMALG00000014623	-	84	89.888	ENSMAMG00000008033	-	90	89.513	Mastacembelus_armatus
ENSMALG00000014623	-	84	88.015	ENSMZEG00005024249	-	84	87.640	Maylandia_zebra
ENSMALG00000014623	-	79	82.540	ENSMZEG00005020460	-	85	82.890	Maylandia_zebra
ENSMALG00000014623	-	70	53.361	ENSMAUG00000015149	Ralyl	79	55.085	Mesocricetus_auratus
ENSMALG00000014623	-	70	56.000	ENSMICG00000005558	RALYL	80	78.481	Microcebus_murinus
ENSMALG00000014623	-	82	48.582	ENSMOCG00000017371	Ralyl	79	55.085	Microtus_ochrogaster
ENSMALG00000014623	-	83	80.534	ENSMMOG00000021465	-	92	81.679	Mola_mola
ENSMALG00000014623	-	79	89.516	ENSMMOG00000019520	-	84	88.800	Mola_mola
ENSMALG00000014623	-	70	52.941	ENSMUSG00000039717	Ralyl	93	77.215	Mus_musculus
ENSMALG00000014623	-	70	54.622	ENSMPUG00000010724	RALYL	79	54.661	Mustela_putorius_furo
ENSMALG00000014623	-	70	53.361	ENSNGAG00000013375	Ralyl	79	55.085	Nannospalax_galili
ENSMALG00000014623	-	84	88.390	ENSNBRG00000015676	-	83	88.015	Neolamprologus_brichardi
ENSMALG00000014623	-	81	83.268	ENSNBRG00000004912	-	93	81.778	Neolamprologus_brichardi
ENSMALG00000014623	-	82	52.273	ENSNLEG00000002702	RALYL	75	57.522	Nomascus_leucogenys
ENSMALG00000014623	-	58	51.256	ENSOPRG00000013650	-	100	50.761	Ochotona_princeps
ENSMALG00000014623	-	70	54.852	ENSODEG00000001012	RALYL	79	55.745	Octodon_degus
ENSMALG00000014623	-	79	83.730	ENSONIG00000007859	-	93	80.515	Oreochromis_niloticus
ENSMALG00000014623	-	84	88.764	ENSONIG00000018350	-	84	88.390	Oreochromis_niloticus
ENSMALG00000014623	-	79	72.157	ENSORLG00000009999	-	85	72.348	Oryzias_latipes
ENSMALG00000014623	-	84	86.081	ENSORLG00000003144	-	82	85.714	Oryzias_latipes
ENSMALG00000014623	-	79	71.765	ENSORLG00020018228	hnrnpc	85	71.970	Oryzias_latipes_hni
ENSMALG00000014623	-	79	72.157	ENSORLG00015019755	-	85	72.348	Oryzias_latipes_hsok
ENSMALG00000014623	-	84	86.081	ENSORLG00015009460	-	82	85.714	Oryzias_latipes_hsok
ENSMALG00000014623	-	84	90.226	ENSOMEG00000022665	-	83	89.850	Oryzias_melastigma
ENSMALG00000014623	-	79	73.725	ENSOMEG00000020488	-	85	73.864	Oryzias_melastigma
ENSMALG00000014623	-	85	49.291	ENSPPAG00000038705	RALYL	78	57.522	Pan_paniscus
ENSMALG00000014623	-	70	58.407	ENSPPRG00000018612	RALYL	78	57.965	Panthera_pardus
ENSMALG00000014623	-	70	58.407	ENSPTIG00000020331	RALYL	78	57.965	Panthera_tigris_altaica
ENSMALG00000014623	-	85	49.291	ENSPTRG00000020381	RALYL	78	57.522	Pan_troglodytes
ENSMALG00000014623	-	85	49.291	ENSPANG00000029305	RALYL	78	57.522	Papio_anubis
ENSMALG00000014623	-	84	76.103	ENSPKIG00000022837	-	85	78.309	Paramormyrops_kingsleyae
ENSMALG00000014623	-	84	78.676	ENSPKIG00000008592	-	85	79.044	Paramormyrops_kingsleyae
ENSMALG00000014623	-	70	54.237	ENSPSIG00000011135	RALYL	79	55.508	Pelodiscus_sinensis
ENSMALG00000014623	-	70	76.471	ENSPMGG00000017774	-	90	66.509	Periophthalmus_magnuspinnatus
ENSMALG00000014623	-	69	88.532	ENSPMGG00000013144	-	83	88.532	Periophthalmus_magnuspinnatus
ENSMALG00000014623	-	70	53.361	ENSPEMG00000016447	Ralyl	79	55.085	Peromyscus_maniculatus_bairdii
ENSMALG00000014623	-	67	54.185	ENSPMAG00000002407	RALYL	97	54.185	Petromyzon_marinus
ENSMALG00000014623	-	84	87.547	ENSPFOG00000002643	-	84	85.130	Poecilia_formosa
ENSMALG00000014623	-	86	77.091	ENSPFOG00000001583	-	86	80.682	Poecilia_formosa
ENSMALG00000014623	-	86	75.636	ENSPLAG00000015305	-	86	79.167	Poecilia_latipinna
ENSMALG00000014623	-	84	87.547	ENSPLAG00000000061	-	82	86.415	Poecilia_latipinna
ENSMALG00000014623	-	86	78.339	ENSPMEG00000004802	-	86	80.682	Poecilia_mexicana
ENSMALG00000014623	-	84	86.792	ENSPMEG00000016524	-	82	86.038	Poecilia_mexicana
ENSMALG00000014623	-	84	86.792	ENSPREG00000001852	-	89	85.660	Poecilia_reticulata
ENSMALG00000014623	-	79	79.447	ENSPREG00000007928	-	86	79.545	Poecilia_reticulata
ENSMALG00000014623	-	82	44.615	ENSPPYG00000018710	-	73	46.847	Pongo_abelii
ENSMALG00000014623	-	89	47.333	ENSPVAG00000010821	RALYL	78	55.085	Pteropus_vampyrus
ENSMALG00000014623	-	81	82.879	ENSPNYG00000020293	-	87	82.879	Pundamilia_nyererei
ENSMALG00000014623	-	84	88.390	ENSPNYG00000003747	-	90	88.015	Pundamilia_nyererei
ENSMALG00000014623	-	83	73.606	ENSPNAG00000019200	zgc:55733	86	75.556	Pygocentrus_nattereri
ENSMALG00000014623	-	78	81.557	ENSPNAG00000015686	hnrnpc	89	80.228	Pygocentrus_nattereri
ENSMALG00000014623	-	82	52.273	ENSRROG00000023925	RALYL	82	76.543	Rhinopithecus_roxellana
ENSMALG00000014623	-	84	73.801	ENSSFOG00015012015	-	82	82.326	Scleropages_formosus
ENSMALG00000014623	-	80	77.481	ENSSFOG00015012924	-	80	97.468	Scleropages_formosus
ENSMALG00000014623	-	82	86.692	ENSSMAG00000011147	-	92	80.400	Scophthalmus_maximus
ENSMALG00000014623	-	79	78.486	ENSSMAG00000013592	-	84	78.571	Scophthalmus_maximus
ENSMALG00000014623	-	84	91.288	ENSSDUG00000006730	-	84	91.288	Seriola_dumerili
ENSMALG00000014623	-	87	81.387	ENSSDUG00000001723	-	85	85.115	Seriola_dumerili
ENSMALG00000014623	-	84	91.288	ENSSLDG00000007474	-	92	91.288	Seriola_lalandi_dorsalis
ENSMALG00000014623	-	84	83.019	ENSSLDG00000007454	-	86	84.733	Seriola_lalandi_dorsalis
ENSMALG00000014623	-	84	90.943	ENSSPAG00000013996	-	84	90.566	Stegastes_partitus
ENSMALG00000014623	-	84	83.083	ENSSPAG00000023204	-	85	84.733	Stegastes_partitus
ENSMALG00000014623	-	69	54.506	ENSTGUG00000011689	RALYL	79	55.844	Taeniopygia_guttata
ENSMALG00000014623	-	83	77.186	ENSTRUG00000020158	-	84	81.102	Takifugu_rubripes
ENSMALG00000014623	-	80	83.730	ENSTNIG00000000334	-	94	83.465	Tetraodon_nigroviridis
ENSMALG00000014623	-	81	75.000	ENSTNIG00000007427	-	84	77.308	Tetraodon_nigroviridis
ENSMALG00000014623	-	75	46.000	ENSTBEG00000005551	RALYL	97	48.000	Tupaia_belangeri
ENSMALG00000014623	-	70	53.219	ENSTTRG00000015762	RALYL	79	55.217	Tursiops_truncatus
ENSMALG00000014623	-	70	51.982	ENSVPAG00000008501	RALYL	79	53.097	Vicugna_pacos
ENSMALG00000014623	-	84	73.432	ENSXCOG00000006552	-	82	73.228	Xiphophorus_couchianus
ENSMALG00000014623	-	84	86.792	ENSXMAG00000022849	-	86	85.660	Xiphophorus_maculatus
ENSMALG00000014623	-	86	76.895	ENSXMAG00000009333	-	86	78.409	Xiphophorus_maculatus