EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000014827 (Gene tree)
Gene ID: 109958303
Gene Symbol: ncl
Alias: fa12d03|wu:fa12d03|zgc:152810
Full Name: nucleolin
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 9050 bases
Position: chrKV884719.1:1323968-1333017
Accession: 109958303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000021197	RRM_1	PF00076.22	4.6e-59	1	4
ENSMALP00000021197	RRM_1	PF00076.22	4.6e-59	2	4
ENSMALP00000021197	RRM_1	PF00076.22	4.6e-59	3	4
ENSMALP00000021197	RRM_1	PF00076.22	4.6e-59	4	4
ENSMALP00000021214	RRM_1	PF00076.22	4.7e-59	1	4
ENSMALP00000021214	RRM_1	PF00076.22	4.7e-59	2	4
ENSMALP00000021214	RRM_1	PF00076.22	4.7e-59	3	4
ENSMALP00000021214	RRM_1	PF00076.22	4.7e-59	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000021604	-	3943	XM_020596844	ENSMALP00000021197	677 (aa)	XP_020452500	-
ENSMALT00000021623	-	3383	-	ENSMALP00000021214	680 (aa)	-	-

Gene Model

Click here to download ENSMALG00000014827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000014827's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000014827	ncl	53	38.667	ENSMALG00000006207	-	70	38.944

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000014827	ncl	65	86.869	ENSAPOG00000023888	ncl	93	78.010	Acanthochromis_polyacanthus
ENSMALG00000014827	ncl	58	40.263	ENSAPOG00000014534	-	69	40.872	Acanthochromis_polyacanthus
ENSMALG00000014827	ncl	72	78.409	ENSACIG00000013234	ncl	58	78.632	Amphilophus_citrinellus
ENSMALG00000014827	ncl	56	41.484	ENSAOCG00000014792	-	63	41.598	Amphiprion_ocellaris
ENSMALG00000014827	ncl	62	85.678	ENSAOCG00000003133	ncl	93	78.964	Amphiprion_ocellaris
ENSMALG00000014827	ncl	56	41.758	ENSAPEG00000013612	-	63	41.873	Amphiprion_percula
ENSMALG00000014827	ncl	62	86.398	ENSAPEG00000002769	ncl	93	78.896	Amphiprion_percula
ENSMALG00000014827	ncl	70	86.986	ENSATEG00000013343	ncl	93	78.803	Anabas_testudineus
ENSMALG00000014827	ncl	64	41.149	ENSATEG00000019862	-	82	42.670	Anabas_testudineus
ENSMALG00000014827	ncl	54	77.660	ENSACLG00000026031	ncl	89	77.660	Astatotilapia_calliptera
ENSMALG00000014827	ncl	51	31.679	ENSAMXG00000001647	ncl	84	64.590	Astyanax_mexicanus
ENSMALG00000014827	ncl	51	60.393	ENSCPBG00000016444	-	58	57.068	Chrysemys_picta_bellii
ENSMALG00000014827	ncl	75	81.972	ENSCSEG00000015089	ncl	100	63.411	Cynoglossus_semilaevis
ENSMALG00000014827	ncl	58	80.912	ENSCVAG00000012600	ncl	90	68.339	Cyprinodon_variegatus
ENSMALG00000014827	ncl	62	69.267	ENSDARG00000002710	ncl	83	69.085	Danio_rerio
ENSMALG00000014827	ncl	74	39.205	ENSDNOG00000031611	-	69	44.602	Dasypus_novemcinctus
ENSMALG00000014827	ncl	75	44.195	ENSEBUG00000016173	ncl	54	46.047	Eptatretus_burgeri
ENSMALG00000014827	ncl	59	46.717	ENSELUG00000022826	-	84	50.144	Esox_lucius
ENSMALG00000014827	ncl	62	75.810	ENSELUG00000006033	ncl	94	62.384	Esox_lucius
ENSMALG00000014827	ncl	50	58.857	ENSFALG00000007592	-	58	58.824	Ficedula_albicollis
ENSMALG00000014827	ncl	58	77.020	ENSFHEG00000018000	ncl	74	66.730	Fundulus_heteroclitus
ENSMALG00000014827	ncl	51	70.520	ENSGMOG00000001341	ncl	77	58.579	Gadus_morhua
ENSMALG00000014827	ncl	51	59.605	ENSGALG00000032930	NCL	58	59.605	Gallus_gallus
ENSMALG00000014827	ncl	65	80.808	ENSGAFG00000015375	ncl	90	67.130	Gambusia_affinis
ENSMALG00000014827	ncl	97	69.144	ENSGACG00000008970	ncl	99	67.205	Gasterosteus_aculeatus
ENSMALG00000014827	ncl	59	57.488	ENSGAGG00000013330	-	56	56.806	Gopherus_agassizii
ENSMALG00000014827	ncl	68	76.802	ENSHCOG00000010234	ncl	89	70.654	Hippocampus_comes
ENSMALG00000014827	ncl	59	81.818	ENSKMAG00000008111	ncl	91	74.441	Kryptolebias_marmoratus
ENSMALG00000014827	ncl	65	86.364	ENSLBEG00000019073	ncl	82	70.798	Labrus_bergylta
ENSMALG00000014827	ncl	65	41.135	ENSLBEG00000007915	-	69	42.350	Labrus_bergylta
ENSMALG00000014827	ncl	52	41.520	ENSLBEG00000014278	-	85	41.642	Labrus_bergylta
ENSMALG00000014827	ncl	57	63.452	ENSLACG00000009328	ncl	58	62.406	Latimeria_chalumnae
ENSMALG00000014827	ncl	61	51.026	ENSLACG00000022167	-	83	52.125	Latimeria_chalumnae
ENSMALG00000014827	ncl	60	37.116	ENSMAMG00000003479	-	72	38.243	Mastacembelus_armatus
ENSMALG00000014827	ncl	97	77.958	ENSMAMG00000002086	ncl	78	74.919	Mastacembelus_armatus
ENSMALG00000014827	ncl	58	79.293	ENSMZEG00005017438	ncl	93	73.582	Maylandia_zebra
ENSMALG00000014827	ncl	53	58.721	ENSMGAG00000008147	-	88	55.978	Meleagris_gallopavo
ENSMALG00000014827	ncl	50	85.816	ENSMMOG00000008553	ncl	90	80.392	Mola_mola
ENSMALG00000014827	ncl	52	32.867	ENSMODG00000002470	-	55	58.840	Monodelphis_domestica
ENSMALG00000014827	ncl	51	81.783	ENSNBRG00000000146	-	89	81.783	Neolamprologus_brichardi
ENSMALG00000014827	ncl	51	81.783	ENSNBRG00000001232	ncl	85	76.812	Neolamprologus_brichardi
ENSMALG00000014827	ncl	52	33.099	ENSMEUG00000012335	-	57	59.831	Notamacropus_eugenii
ENSMALG00000014827	ncl	51	79.885	ENSONIG00000012508	ncl	93	74.434	Oreochromis_niloticus
ENSMALG00000014827	ncl	64	59.069	ENSOANG00000008732	-	57	60.221	Ornithorhynchus_anatinus
ENSMALG00000014827	ncl	56	34.536	ENSORLG00000004645	-	85	36.740	Oryzias_latipes
ENSMALG00000014827	ncl	59	81.313	ENSORLG00020017943	ncl	91	35.620	Oryzias_latipes_hni
ENSMALG00000014827	ncl	54	35.561	ENSORLG00020003497	-	76	37.569	Oryzias_latipes_hni
ENSMALG00000014827	ncl	51	36.538	ENSORLG00015006613	-	80	36.813	Oryzias_latipes_hsok
ENSMALG00000014827	ncl	59	78.030	ENSORLG00015013815	ncl	88	82.624	Oryzias_latipes_hsok
ENSMALG00000014827	ncl	56	35.443	ENSOMEG00000015864	-	84	35.115	Oryzias_melastigma
ENSMALG00000014827	ncl	71	82.051	ENSOMEG00000020786	ncl	82	70.510	Oryzias_melastigma
ENSMALG00000014827	ncl	62	72.447	ENSPKIG00000002604	ncl	85	61.526	Paramormyrops_kingsleyae
ENSMALG00000014827	ncl	58	75.819	ENSPMGG00000004709	ncl	89	66.722	Periophthalmus_magnuspinnatus
ENSMALG00000014827	ncl	52	33.684	ENSPCIG00000003293	-	56	58.840	Phascolarctos_cinereus
ENSMALG00000014827	ncl	67	78.621	ENSPFOG00000024205	ncl	87	67.708	Poecilia_formosa
ENSMALG00000014827	ncl	67	78.391	ENSPLAG00000024026	ncl	93	68.865	Poecilia_latipinna
ENSMALG00000014827	ncl	67	78.391	ENSPMEG00000006000	ncl	87	66.361	Poecilia_mexicana
ENSMALG00000014827	ncl	58	79.293	ENSPNYG00000020494	ncl	93	73.496	Pundamilia_nyererei
ENSMALG00000014827	ncl	58	70.352	ENSPNAG00000006192	ncl	54	69.849	Pygocentrus_nattereri
ENSMALG00000014827	ncl	55	55.432	ENSSHAG00000002702	-	57	31.399	Sarcophilus_harrisii
ENSMALG00000014827	ncl	55	32.727	ENSSFOG00015008583	ncl	96	64.352	Scleropages_formosus
ENSMALG00000014827	ncl	65	79.905	ENSSMAG00000021241	ncl	92	74.371	Scophthalmus_maximus
ENSMALG00000014827	ncl	58	43.548	ENSSMAG00000007582	-	66	43.820	Scophthalmus_maximus
ENSMALG00000014827	ncl	68	84.966	ENSSDUG00000006128	ncl	92	87.749	Seriola_dumerili
ENSMALG00000014827	ncl	60	39.723	ENSSDUG00000010922	-	73	42.818	Seriola_dumerili
ENSMALG00000014827	ncl	74	83.514	ENSSLDG00000002012	ncl	93	78.303	Seriola_lalandi_dorsalis
ENSMALG00000014827	ncl	60	39.437	ENSSLDG00000015784	-	67	42.778	Seriola_lalandi_dorsalis
ENSMALG00000014827	ncl	55	58.152	ENSSPUG00000008244	-	63	55.190	Sphenodon_punctatus
ENSMALG00000014827	ncl	51	88.372	ENSSPAG00000002637	ncl	82	88.372	Stegastes_partitus
ENSMALG00000014827	ncl	57	42.618	ENSSPAG00000001859	-	63	42.618	Stegastes_partitus
ENSMALG00000014827	ncl	51	58.939	ENSTGUG00000009782	-	62	59.497	Taeniopygia_guttata
ENSMALG00000014827	ncl	94	63.125	ENSTRUG00000008185	ncl	87	67.293	Takifugu_rubripes
ENSMALG00000014827	ncl	70	51.753	ENSXETG00000009517	ncl	56	58.245	Xenopus_tropicalis
ENSMALG00000014827	ncl	52	48.214	ENSXCOG00000003524	ncl	88	58.133	Xiphophorus_couchianus
ENSMALG00000014827	ncl	51	39.385	ENSXCOG00000007369	-	90	37.824	Xiphophorus_couchianus
ENSMALG00000014827	ncl	58	82.051	ENSXMAG00000005914	ncl	59	73.945	Xiphophorus_maculatus