EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000015471 (Gene tree)
Gene ID: 109975031
Gene Symbol: rnpc3
Alias: caliban|clbn|zgc:136847
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 32758 bases
Position: chrKV885046.1:356896-389653
Accession: 109975031
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000022141	RRM_1	PF00076.22	8.2e-17	1	2
ENSMALP00000022141	RRM_1	PF00076.22	8.2e-17	2	2
ENSMALP00000022163	RRM_1	PF00076.22	8.2e-17	1	2
ENSMALP00000022163	RRM_1	PF00076.22	8.2e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000022566	-	4601	XM_020625546	ENSMALP00000022141	506 (aa)	XP_020481202	UPI0009B41E9F
ENSMALT00000022588	-	4240	XM_020625547	ENSMALP00000022163	506 (aa)	XP_020481203	UPI0009B41E9F

Gene Model

Click here to download ENSMALG00000015471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000015471's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000015471	rnpc3	97	53.320	ENSG00000185946	RNPC3	96	56.391	Homo_sapiens
ENSMALG00000015471	rnpc3	100	78.235	ENSAPOG00000017371	rnpc3	99	78.235	Acanthochromis_polyacanthus
ENSMALG00000015471	rnpc3	97	53.307	ENSAMEG00000001694	RNPC3	94	53.307	Ailuropoda_melanoleuca
ENSMALG00000015471	rnpc3	99	74.308	ENSACIG00000021043	rnpc3	99	74.111	Amphilophus_citrinellus
ENSMALG00000015471	rnpc3	100	78.824	ENSAOCG00000014052	rnpc3	98	78.824	Amphiprion_ocellaris
ENSMALG00000015471	rnpc3	100	78.627	ENSAPEG00000008739	rnpc3	98	78.627	Amphiprion_percula
ENSMALG00000015471	rnpc3	100	80.350	ENSATEG00000021263	rnpc3	99	80.350	Anabas_testudineus
ENSMALG00000015471	rnpc3	89	52.070	ENSAPLG00000015605	RNPC3	99	53.132	Anas_platyrhynchos
ENSMALG00000015471	rnpc3	96	52.716	ENSACAG00000002029	RNPC3	97	51.081	Anolis_carolinensis
ENSMALG00000015471	rnpc3	97	51.976	ENSANAG00000019950	RNPC3	95	51.976	Aotus_nancymaae
ENSMALG00000015471	rnpc3	99	75.992	ENSACLG00000014702	rnpc3	98	75.992	Astatotilapia_calliptera
ENSMALG00000015471	rnpc3	99	62.157	ENSAMXG00000033372	rnpc3	98	62.109	Astyanax_mexicanus
ENSMALG00000015471	rnpc3	97	52.988	ENSBTAG00000019091	RNPC3	95	52.871	Bos_taurus
ENSMALG00000015471	rnpc3	97	51.503	ENSCJAG00000035686	RNPC3	94	52.305	Callithrix_jacchus
ENSMALG00000015471	rnpc3	97	53.012	ENSCAFG00000019972	RNPC3	94	53.012	Canis_familiaris
ENSMALG00000015471	rnpc3	97	53.012	ENSCAFG00020011300	RNPC3	94	53.012	Canis_lupus_dingo
ENSMALG00000015471	rnpc3	99	52.632	ENSCHIG00000020361	RNPC3	96	52.039	Capra_hircus
ENSMALG00000015471	rnpc3	97	52.716	ENSTSYG00000030256	RNPC3	95	53.213	Carlito_syrichta
ENSMALG00000015471	rnpc3	86	44.719	ENSCAPG00000013600	RNPC3	97	44.773	Cavia_aperea
ENSMALG00000015471	rnpc3	97	52.811	ENSCPOG00000031638	RNPC3	95	52.789	Cavia_porcellus
ENSMALG00000015471	rnpc3	97	53.012	ENSCCAG00000024301	RNPC3	95	52.811	Cebus_capucinus
ENSMALG00000015471	rnpc3	97	53.213	ENSCATG00000002086	RNPC3	94	53.213	Cercocebus_atys
ENSMALG00000015471	rnpc3	97	41.818	ENSCATG00000035930	-	95	40.404	Cercocebus_atys
ENSMALG00000015471	rnpc3	97	52.000	ENSCLAG00000005169	RNPC3	95	52.200	Chinchilla_lanigera
ENSMALG00000015471	rnpc3	97	53.213	ENSCSAG00000001519	RNPC3	94	53.213	Chlorocebus_sabaeus
ENSMALG00000015471	rnpc3	97	52.381	ENSCPBG00000028311	RNPC3	95	54.348	Chrysemys_picta_bellii
ENSMALG00000015471	rnpc3	95	36.437	ENSCSAVG00000002800	-	76	50.769	Ciona_savignyi
ENSMALG00000015471	rnpc3	97	52.800	ENSCANG00000031444	RNPC3	94	52.610	Colobus_angolensis_palliatus
ENSMALG00000015471	rnpc3	97	52.314	ENSCGRG00001019276	Rnpc3	95	52.314	Cricetulus_griseus_chok1gshd
ENSMALG00000015471	rnpc3	89	50.327	ENSCGRG00000000053	Rnpc3	99	50.327	Cricetulus_griseus_crigri
ENSMALG00000015471	rnpc3	99	71.850	ENSCSEG00000013475	rnpc3	99	71.850	Cynoglossus_semilaevis
ENSMALG00000015471	rnpc3	99	74.753	ENSCVAG00000002645	rnpc3	99	74.753	Cyprinodon_variegatus
ENSMALG00000015471	rnpc3	98	62.425	ENSDARG00000011247	rnpc3	98	62.624	Danio_rerio
ENSMALG00000015471	rnpc3	97	52.113	ENSDNOG00000047498	-	95	52.016	Dasypus_novemcinctus
ENSMALG00000015471	rnpc3	97	52.113	ENSDNOG00000044555	-	95	51.815	Dasypus_novemcinctus
ENSMALG00000015471	rnpc3	98	52.475	ENSDORG00000027343	Rnpc3	96	52.475	Dipodomys_ordii
ENSMALG00000015471	rnpc3	97	50.098	ENSEBUG00000002068	rnpc3	96	49.705	Eptatretus_burgeri
ENSMALG00000015471	rnpc3	97	53.707	ENSEASG00005015957	RNPC3	94	54.217	Equus_asinus_asinus
ENSMALG00000015471	rnpc3	97	54.016	ENSECAG00000021148	RNPC3	94	54.217	Equus_caballus
ENSMALG00000015471	rnpc3	99	65.769	ENSELUG00000002264	rnpc3	98	63.462	Esox_lucius
ENSMALG00000015471	rnpc3	98	52.778	ENSFCAG00000024312	RNPC3	96	52.569	Felis_catus
ENSMALG00000015471	rnpc3	89	53.377	ENSFALG00000002580	RNPC3	99	52.752	Ficedula_albicollis
ENSMALG00000015471	rnpc3	97	52.400	ENSFDAG00000019948	RNPC3	95	52.400	Fukomys_damarensis
ENSMALG00000015471	rnpc3	99	63.347	ENSFHEG00000020647	rnpc3	99	68.651	Fundulus_heteroclitus
ENSMALG00000015471	rnpc3	99	62.622	ENSGMOG00000019213	rnpc3	98	61.373	Gadus_morhua
ENSMALG00000015471	rnpc3	98	53.280	ENSGALG00000005162	RNPC3	89	52.883	Gallus_gallus
ENSMALG00000015471	rnpc3	100	71.765	ENSGAFG00000017236	rnpc3	99	71.765	Gambusia_affinis
ENSMALG00000015471	rnpc3	100	74.854	ENSGACG00000002048	rnpc3	99	75.049	Gasterosteus_aculeatus
ENSMALG00000015471	rnpc3	98	53.922	ENSGAGG00000008438	RNPC3	95	54.902	Gopherus_agassizii
ENSMALG00000015471	rnpc3	98	46.693	ENSGGOG00000026201	-	95	46.693	Gorilla_gorilla
ENSMALG00000015471	rnpc3	82	76.087	ENSHBUG00000015966	rnpc3	84	76.087	Haplochromis_burtoni
ENSMALG00000015471	rnpc3	97	51.807	ENSHGLG00000001708	RNPC3	95	51.807	Heterocephalus_glaber_female
ENSMALG00000015471	rnpc3	97	51.807	ENSHGLG00100003005	RNPC3	95	51.807	Heterocephalus_glaber_male
ENSMALG00000015471	rnpc3	98	71.429	ENSHCOG00000017135	rnpc3	97	71.429	Hippocampus_comes
ENSMALG00000015471	rnpc3	99	60.819	ENSIPUG00000002916	rnpc3	98	61.067	Ictalurus_punctatus
ENSMALG00000015471	rnpc3	97	52.087	ENSSTOG00000025020	RNPC3	95	52.087	Ictidomys_tridecemlineatus
ENSMALG00000015471	rnpc3	97	53.737	ENSJJAG00000010203	Rnpc3	96	53.187	Jaculus_jaculus
ENSMALG00000015471	rnpc3	99	73.611	ENSKMAG00000017358	rnpc3	99	73.413	Kryptolebias_marmoratus
ENSMALG00000015471	rnpc3	99	76.295	ENSLBEG00000024901	rnpc3	96	76.295	Labrus_bergylta
ENSMALG00000015471	rnpc3	99	55.992	ENSLACG00000005720	RNPC3	91	53.831	Latimeria_chalumnae
ENSMALG00000015471	rnpc3	99	58.383	ENSLOCG00000007986	rnpc3	98	59.646	Lepisosteus_oculatus
ENSMALG00000015471	rnpc3	97	54.016	ENSLAFG00000032342	RNPC3	95	54.016	Loxodonta_africana
ENSMALG00000015471	rnpc3	97	40.524	ENSMFAG00000002917	-	94	39.880	Macaca_fascicularis
ENSMALG00000015471	rnpc3	97	53.213	ENSMFAG00000002004	RNPC3	94	53.213	Macaca_fascicularis
ENSMALG00000015471	rnpc3	97	53.012	ENSMMUG00000018039	RNPC3	94	53.012	Macaca_mulatta
ENSMALG00000015471	rnpc3	80	46.818	ENSMMUG00000002098	-	85	47.059	Macaca_mulatta
ENSMALG00000015471	rnpc3	97	37.602	ENSMNEG00000029209	-	94	39.718	Macaca_nemestrina
ENSMALG00000015471	rnpc3	97	50.201	ENSMNEG00000033950	RNPC3	94	50.201	Macaca_nemestrina
ENSMALG00000015471	rnpc3	97	41.093	ENSMLEG00000034644	-	95	41.010	Mandrillus_leucophaeus
ENSMALG00000015471	rnpc3	97	53.213	ENSMLEG00000033628	RNPC3	94	53.213	Mandrillus_leucophaeus
ENSMALG00000015471	rnpc3	99	74.951	ENSMAMG00000007496	rnpc3	99	74.951	Mastacembelus_armatus
ENSMALG00000015471	rnpc3	99	75.490	ENSMZEG00005020233	rnpc3	99	75.490	Maylandia_zebra
ENSMALG00000015471	rnpc3	89	53.118	ENSMGAG00000006381	RNPC3	99	53.362	Meleagris_gallopavo
ENSMALG00000015471	rnpc3	97	52.823	ENSMAUG00000001358	Rnpc3	95	52.823	Mesocricetus_auratus
ENSMALG00000015471	rnpc3	97	52.894	ENSMICG00000029591	RNPC3	95	52.475	Microcebus_murinus
ENSMALG00000015471	rnpc3	97	52.600	ENSMOCG00000013423	Rnpc3	94	52.600	Microtus_ochrogaster
ENSMALG00000015471	rnpc3	100	69.155	ENSMMOG00000005309	rnpc3	99	70.530	Mola_mola
ENSMALG00000015471	rnpc3	97	52.390	ENSMODG00000002946	RNPC3	95	52.305	Monodelphis_domestica
ENSMALG00000015471	rnpc3	97	52.918	MGP_CAROLIEiJ_G0025555	Rnpc3	96	53.119	Mus_caroli
ENSMALG00000015471	rnpc3	97	52.906	ENSMUSG00000027981	Rnpc3	99	51.163	Mus_musculus
ENSMALG00000015471	rnpc3	99	51.663	MGP_PahariEiJ_G0027001	Rnpc3	97	51.779	Mus_pahari
ENSMALG00000015471	rnpc3	97	52.705	MGP_SPRETEiJ_G0026505	Rnpc3	96	52.705	Mus_spretus
ENSMALG00000015471	rnpc3	97	53.131	ENSMPUG00000007349	RNPC3	94	53.131	Mustela_putorius_furo
ENSMALG00000015471	rnpc3	97	53.131	ENSMLUG00000028743	RNPC3	94	53.131	Myotis_lucifugus
ENSMALG00000015471	rnpc3	99	51.657	ENSNGAG00000010939	Rnpc3	97	51.462	Nannospalax_galili
ENSMALG00000015471	rnpc3	99	76.587	ENSNBRG00000012196	rnpc3	95	76.587	Neolamprologus_brichardi
ENSMALG00000015471	rnpc3	97	52.475	ENSNLEG00000012013	RNPC3	95	52.475	Nomascus_leucogenys
ENSMALG00000015471	rnpc3	97	51.600	ENSODEG00000007612	RNPC3	95	51.600	Octodon_degus
ENSMALG00000015471	rnpc3	99	76.984	ENSONIG00000004770	rnpc3	100	77.172	Oreochromis_niloticus
ENSMALG00000015471	rnpc3	92	51.797	ENSOANG00000008220	RNPC3	99	54.123	Ornithorhynchus_anatinus
ENSMALG00000015471	rnpc3	97	53.785	ENSOCUG00000004016	RNPC3	95	52.906	Oryctolagus_cuniculus
ENSMALG00000015471	rnpc3	99	71.514	ENSORLG00000005694	rnpc3	98	71.514	Oryzias_latipes
ENSMALG00000015471	rnpc3	99	72.112	ENSORLG00020005513	rnpc3	98	72.112	Oryzias_latipes_hni
ENSMALG00000015471	rnpc3	99	71.514	ENSORLG00015002179	rnpc3	98	71.514	Oryzias_latipes_hsok
ENSMALG00000015471	rnpc3	100	72.102	ENSOMEG00000017737	rnpc3	99	72.102	Oryzias_melastigma
ENSMALG00000015471	rnpc3	97	53.414	ENSOGAG00000026182	RNPC3	95	53.414	Otolemur_garnettii
ENSMALG00000015471	rnpc3	99	52.632	ENSOARG00000018719	RNPC3	96	52.039	Ovis_aries
ENSMALG00000015471	rnpc3	97	52.268	ENSPPAG00000037459	RNPC3	95	52.268	Pan_paniscus
ENSMALG00000015471	rnpc3	98	47.896	ENSPPAG00000030278	-	95	47.896	Pan_paniscus
ENSMALG00000015471	rnpc3	98	52.778	ENSPPRG00000020246	RNPC3	96	52.569	Panthera_pardus
ENSMALG00000015471	rnpc3	98	52.778	ENSPTIG00000009887	RNPC3	98	52.569	Panthera_tigris_altaica
ENSMALG00000015471	rnpc3	97	53.012	ENSPTRG00000033902	RNPC3	95	53.012	Pan_troglodytes
ENSMALG00000015471	rnpc3	96	46.748	ENSPTRG00000044227	-	95	46.748	Pan_troglodytes
ENSMALG00000015471	rnpc3	97	53.320	ENSPANG00000012137	RNPC3	94	53.320	Papio_anubis
ENSMALG00000015471	rnpc3	97	42.596	ENSPANG00000029957	-	96	41.082	Papio_anubis
ENSMALG00000015471	rnpc3	99	59.921	ENSPKIG00000008828	rnpc3	98	60.119	Paramormyrops_kingsleyae
ENSMALG00000015471	rnpc3	65	49.408	ENSPSIG00000007396	RNPC3	99	50.000	Pelodiscus_sinensis
ENSMALG00000015471	rnpc3	100	59.646	ENSPMGG00000011742	rnpc3	100	60.078	Periophthalmus_magnuspinnatus
ENSMALG00000015471	rnpc3	92	49.476	ENSPEMG00000020112	Rnpc3	99	50.649	Peromyscus_maniculatus_bairdii
ENSMALG00000015471	rnpc3	97	41.264	ENSPMAG00000003778	rnpc3	50	46.154	Petromyzon_marinus
ENSMALG00000015471	rnpc3	97	52.988	ENSPCIG00000004415	-	95	52.906	Phascolarctos_cinereus
ENSMALG00000015471	rnpc3	99	72.619	ENSPFOG00000009895	rnpc3	98	72.619	Poecilia_formosa
ENSMALG00000015471	rnpc3	99	73.413	ENSPLAG00000012023	rnpc3	98	73.413	Poecilia_latipinna
ENSMALG00000015471	rnpc3	99	72.817	ENSPMEG00000003663	rnpc3	98	72.817	Poecilia_mexicana
ENSMALG00000015471	rnpc3	98	72.655	ENSPREG00000010206	rnpc3	98	72.655	Poecilia_reticulata
ENSMALG00000015471	rnpc3	81	48.681	ENSPPYG00000001102	RNPC3	93	48.681	Pongo_abelii
ENSMALG00000015471	rnpc3	99	76.190	ENSPNYG00000020603	rnpc3	98	76.190	Pundamilia_nyererei
ENSMALG00000015471	rnpc3	99	52.820	ENSPNAG00000000524	rnpc3	91	54.070	Pygocentrus_nattereri
ENSMALG00000015471	rnpc3	97	52.906	ENSRNOG00000017310	Rnpc3	95	52.716	Rattus_norvegicus
ENSMALG00000015471	rnpc3	97	49.507	ENSRBIG00000043897	RNPC3	94	49.704	Rhinopithecus_bieti
ENSMALG00000015471	rnpc3	97	53.213	ENSRROG00000032334	RNPC3	94	53.213	Rhinopithecus_roxellana
ENSMALG00000015471	rnpc3	97	52.918	ENSSBOG00000024473	RNPC3	97	51.969	Saimiri_boliviensis_boliviensis
ENSMALG00000015471	rnpc3	97	53.069	ENSSHAG00000011859	RNPC3	95	53.069	Sarcophilus_harrisii
ENSMALG00000015471	rnpc3	99	63.458	ENSSFOG00015013055	rnpc3	99	63.855	Scleropages_formosus
ENSMALG00000015471	rnpc3	100	78.947	ENSSMAG00000020346	rnpc3	99	78.947	Scophthalmus_maximus
ENSMALG00000015471	rnpc3	100	81.018	ENSSDUG00000006600	rnpc3	99	81.018	Seriola_dumerili
ENSMALG00000015471	rnpc3	100	80.626	ENSSLDG00000007979	rnpc3	99	80.626	Seriola_lalandi_dorsalis
ENSMALG00000015471	rnpc3	98	47.582	ENSSPUG00000003872	-	93	50.898	Sphenodon_punctatus
ENSMALG00000015471	rnpc3	98	77.844	ENSSPAG00000005633	rnpc3	98	77.844	Stegastes_partitus
ENSMALG00000015471	rnpc3	97	53.119	ENSSSCG00000037254	RNPC3	95	52.716	Sus_scrofa
ENSMALG00000015471	rnpc3	89	54.367	ENSTGUG00000004795	-	99	54.367	Taeniopygia_guttata
ENSMALG00000015471	rnpc3	100	72.016	ENSTNIG00000018963	rnpc3	99	72.016	Tetraodon_nigroviridis
ENSMALG00000015471	rnpc3	97	53.213	ENSUMAG00000007775	RNPC3	96	53.213	Ursus_maritimus
ENSMALG00000015471	rnpc3	97	53.012	ENSVVUG00000000331	RNPC3	94	53.012	Vulpes_vulpes
ENSMALG00000015471	rnpc3	97	43.110	ENSXETG00000025027	rnpc3	96	42.574	Xenopus_tropicalis
ENSMALG00000015471	rnpc3	100	65.891	ENSXCOG00000005013	rnpc3	99	70.270	Xiphophorus_couchianus
ENSMALG00000015471	rnpc3	100	71.680	ENSXMAG00000006495	rnpc3	99	72.549	Xiphophorus_maculatus