EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMALG00000015720 (Gene tree)
Gene ID: 109972056
Gene Symbol: rbm42
Alias: mgc10433l|zgc:109907
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 25654 bases
Position: chrKV884933.1:478066-503719
Accession: 109972056
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000022566	RRM_1	PF00076.22	6.8e-18	1	1
ENSMALP00000022527	RRM_1	PF00076.22	6.9e-18	1	1
ENSMALP00000022546	RRM_1	PF00076.22	7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000022996	-	1113	-	ENSMALP00000022566	370 (aa)	-	-
ENSMALT00000022976	-	3453	-	ENSMALP00000022546	372 (aa)	-	-
ENSMALT00000022957	-	3838	XM_020620664	ENSMALP00000022527	369 (aa)	XP_020476320	-

Gene Model

Click here to download ENSMALG00000015720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000015720's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000015720	rbm42	100	88.076	ENSAPOG00000015109	rbm42	91	88.076	Acanthochromis_polyacanthus
ENSMALG00000015720	rbm42	100	83.740	ENSACIG00000010771	rbm42	100	77.556	Amphilophus_citrinellus
ENSMALG00000015720	rbm42	100	88.889	ENSAOCG00000008873	rbm42	91	88.889	Amphiprion_ocellaris
ENSMALG00000015720	rbm42	100	88.889	ENSAPEG00000012051	rbm42	90	88.889	Amphiprion_percula
ENSMALG00000015720	rbm42	100	87.805	ENSATEG00000000536	rbm42	91	87.805	Anabas_testudineus
ENSMALG00000015720	rbm42	100	86.721	ENSACLG00000004988	rbm42	91	86.721	Astatotilapia_calliptera
ENSMALG00000015720	rbm42	100	73.280	ENSAMXG00000016545	rbm42	100	64.128	Astyanax_mexicanus
ENSMALG00000015720	rbm42	100	82.796	ENSCSEG00000010248	rbm42	94	83.871	Cynoglossus_semilaevis
ENSMALG00000015720	rbm42	100	81.233	ENSCVAG00000015589	rbm42	92	81.501	Cyprinodon_variegatus
ENSMALG00000015720	rbm42	100	67.905	ENSDARG00000039910	rbm42	100	63.325	Danio_rerio
ENSMALG00000015720	rbm42	100	69.409	ENSELUG00000022403	rbm42	100	61.358	Esox_lucius
ENSMALG00000015720	rbm42	72	78.388	ENSFHEG00000006764	rbm42	91	79.412	Fundulus_heteroclitus
ENSMALG00000015720	rbm42	100	72.800	ENSGMOG00000012660	rbm42	100	62.069	Gadus_morhua
ENSMALG00000015720	rbm42	83	77.492	ENSGAFG00000009059	rbm42	99	79.618	Gambusia_affinis
ENSMALG00000015720	rbm42	100	82.927	ENSGACG00000004170	rbm42	91	82.114	Gasterosteus_aculeatus
ENSMALG00000015720	rbm42	100	86.450	ENSHBUG00000011141	rbm42	91	86.450	Haplochromis_burtoni
ENSMALG00000015720	rbm42	100	76.280	ENSHCOG00000021214	rbm42	91	77.898	Hippocampus_comes
ENSMALG00000015720	rbm42	100	71.654	ENSIPUG00000022365	rbm42	91	70.866	Ictalurus_punctatus
ENSMALG00000015720	rbm42	90	76.716	ENSKMAG00000015287	rbm42	90	78.507	Kryptolebias_marmoratus
ENSMALG00000015720	rbm42	93	83.526	ENSLBEG00000004578	-	96	83.095	Labrus_bergylta
ENSMALG00000015720	rbm42	100	82.796	ENSLBEG00000017547	rbm42	91	83.065	Labrus_bergylta
ENSMALG00000015720	rbm42	94	68.732	ENSLOCG00000003368	rbm42	100	59.059	Lepisosteus_oculatus
ENSMALG00000015720	rbm42	100	91.599	ENSMAMG00000006708	rbm42	91	91.599	Mastacembelus_armatus
ENSMALG00000015720	rbm42	100	86.721	ENSMZEG00005025234	rbm42	91	86.721	Maylandia_zebra
ENSMALG00000015720	rbm42	100	87.366	ENSONIG00000008029	rbm42	91	87.366	Oreochromis_niloticus
ENSMALG00000015720	rbm42	100	61.518	ENSORLG00020022507	rbm42	90	56.675	Oryzias_latipes_hni
ENSMALG00000015720	rbm42	100	81.030	ENSORLG00015000659	rbm42	91	81.030	Oryzias_latipes_hsok
ENSMALG00000015720	rbm42	77	74.912	ENSOMEG00000014332	rbm42	97	79.151	Oryzias_melastigma
ENSMALG00000015720	rbm42	100	72.487	ENSPKIG00000015165	rbm42	100	63.373	Paramormyrops_kingsleyae
ENSMALG00000015720	rbm42	91	65.672	ENSPMGG00000003569	rbm42	100	98.571	Periophthalmus_magnuspinnatus
ENSMALG00000015720	rbm42	58	57.207	ENSPMAG00000008633	rbm42	100	50.667	Petromyzon_marinus
ENSMALG00000015720	rbm42	100	79.032	ENSPFOG00000007701	rbm42	91	81.452	Poecilia_formosa
ENSMALG00000015720	rbm42	100	79.032	ENSPLAG00000009405	rbm42	91	81.183	Poecilia_latipinna
ENSMALG00000015720	rbm42	100	79.301	ENSPMEG00000010375	rbm42	91	81.720	Poecilia_mexicana
ENSMALG00000015720	rbm42	100	79.301	ENSPREG00000018102	rbm42	93	81.127	Poecilia_reticulata
ENSMALG00000015720	rbm42	100	86.721	ENSPNYG00000014460	rbm42	91	86.721	Pundamilia_nyererei
ENSMALG00000015720	rbm42	100	71.503	ENSPNAG00000009961	rbm42	100	61.972	Pygocentrus_nattereri
ENSMALG00000015720	rbm42	100	69.975	ENSSFOG00015019227	rbm42	100	62.679	Scleropages_formosus
ENSMALG00000015720	rbm42	100	84.054	ENSSMAG00000011935	rbm42	91	84.054	Scophthalmus_maximus
ENSMALG00000015720	rbm42	100	90.515	ENSSDUG00000004033	rbm42	91	90.515	Seriola_dumerili
ENSMALG00000015720	rbm42	100	79.587	ENSSLDG00000009918	rbm42	100	79.587	Seriola_lalandi_dorsalis
ENSMALG00000015720	rbm42	100	88.618	ENSSPAG00000019871	rbm42	91	88.618	Stegastes_partitus
ENSMALG00000015720	rbm42	100	79.675	ENSTRUG00000024586	-	69	78.862	Takifugu_rubripes
ENSMALG00000015720	rbm42	100	67.241	ENSTNIG00000011669	rbm42	100	60.227	Tetraodon_nigroviridis
ENSMALG00000015720	rbm42	97	57.592	ENSXETG00000017599	rbm42	100	52.567	Xenopus_tropicalis
ENSMALG00000015720	rbm42	100	79.032	ENSXMAG00000012827	rbm42	93	80.845	Xiphophorus_maculatus