EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000016399 (Gene tree)
Gene ID: 109963969
Gene Symbol: pum1
Alias: fb96a03|si:ch211-285e16.1|wu:fb96a03|wu:fb96a08|zgc:63671
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 14605 bases
Position: chrKV884770.1:1215390-1229994
Accession: 109963969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000023545	PUF	PF00806.19	1.4e-70	1	8
ENSMALP00000023545	PUF	PF00806.19	1.4e-70	2	8
ENSMALP00000023545	PUF	PF00806.19	1.4e-70	3	8
ENSMALP00000023545	PUF	PF00806.19	1.4e-70	4	8
ENSMALP00000023545	PUF	PF00806.19	1.4e-70	5	8
ENSMALP00000023545	PUF	PF00806.19	1.4e-70	6	8
ENSMALP00000023545	PUF	PF00806.19	1.4e-70	7	8
ENSMALP00000023545	PUF	PF00806.19	1.4e-70	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000023994	-	2943	XM_020606938	ENSMALP00000023545	980 (aa)	XP_020462594	-

Gene Model

Click here to download ENSMALG00000016399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000016399's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000016399	pum1	99	65.144	ENSMALG00000022313	pum2	100	63.022

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000016399	pum1	100	91.525	ENSG00000134644	PUM1	99	88.506	Homo_sapiens
ENSMALG00000016399	pum1	100	94.094	ENSAPOG00000021632	pum1	100	94.094	Acanthochromis_polyacanthus
ENSMALG00000016399	pum1	100	91.084	ENSAMEG00000017656	PUM1	87	88.506	Ailuropoda_melanoleuca
ENSMALG00000016399	pum1	100	98.065	ENSAOCG00000003944	pum1	100	98.065	Amphiprion_ocellaris
ENSMALG00000016399	pum1	100	98.065	ENSAPEG00000014550	pum1	100	98.065	Amphiprion_percula
ENSMALG00000016399	pum1	100	99.518	ENSATEG00000016004	pum1	100	98.065	Anabas_testudineus
ENSMALG00000016399	pum1	100	91.566	ENSAPLG00000009351	PUM1	90	88.506	Anas_platyrhynchos
ENSMALG00000016399	pum1	100	91.566	ENSACAG00000000682	PUM1	88	88.506	Anolis_carolinensis
ENSMALG00000016399	pum1	100	91.283	ENSANAG00000027865	PUM1	90	88.684	Aotus_nancymaae
ENSMALG00000016399	pum1	100	76.787	ENSACLG00000019354	pum1	93	99.036	Astatotilapia_calliptera
ENSMALG00000016399	pum1	100	91.525	ENSBTAG00000018979	PUM1	90	88.915	Bos_taurus
ENSMALG00000016399	pum1	100	91.084	ENSCJAG00000006035	PUM1	90	88.506	Callithrix_jacchus
ENSMALG00000016399	pum1	100	91.084	ENSCAFG00020024616	PUM1	99	88.506	Canis_lupus_dingo
ENSMALG00000016399	pum1	100	91.525	ENSCHIG00000012952	PUM1	90	88.915	Capra_hircus
ENSMALG00000016399	pum1	100	91.084	ENSTSYG00000008868	PUM1	90	88.506	Carlito_syrichta
ENSMALG00000016399	pum1	100	90.843	ENSCPOG00000031613	PUM1	90	88.276	Cavia_porcellus
ENSMALG00000016399	pum1	88	91.084	ENSCATG00000017991	PUM1	87	88.506	Cercocebus_atys
ENSMALG00000016399	pum1	100	90.843	ENSCLAG00000007662	PUM1	90	88.276	Chinchilla_lanigera
ENSMALG00000016399	pum1	100	91.084	ENSCSAG00000001028	PUM1	90	88.506	Chlorocebus_sabaeus
ENSMALG00000016399	pum1	99	68.729	ENSCHOG00000010245	PUM1	82	65.862	Choloepus_hoffmanni
ENSMALG00000016399	pum1	100	91.807	ENSCPBG00000009288	PUM1	99	88.736	Chrysemys_picta_bellii
ENSMALG00000016399	pum1	100	91.084	ENSCANG00000042606	PUM1	88	88.506	Colobus_angolensis_palliatus
ENSMALG00000016399	pum1	100	90.799	ENSCGRG00001024949	Pum1	90	88.222	Cricetulus_griseus_chok1gshd
ENSMALG00000016399	pum1	100	90.799	ENSCGRG00000014197	Pum1	90	88.222	Cricetulus_griseus_crigri
ENSMALG00000016399	pum1	100	98.072	ENSCVAG00000007043	pum1	85	98.072	Cyprinodon_variegatus
ENSMALG00000016399	pum1	100	79.200	ENSDORG00000001875	Pum1	100	77.455	Dipodomys_ordii
ENSMALG00000016399	pum1	100	90.602	ENSEASG00005010813	PUM1	90	88.046	Equus_asinus_asinus
ENSMALG00000016399	pum1	100	90.602	ENSECAG00000021369	PUM1	90	88.046	Equus_caballus
ENSMALG00000016399	pum1	76	90.843	ENSEEUG00000003871	PUM1	62	88.276	Erinaceus_europaeus
ENSMALG00000016399	pum1	100	96.386	ENSELUG00000002409	pum1	85	96.145	Esox_lucius
ENSMALG00000016399	pum1	100	91.084	ENSFCAG00000010374	PUM1	90	88.506	Felis_catus
ENSMALG00000016399	pum1	100	90.777	ENSFDAG00000011319	PUM1	90	88.276	Fukomys_damarensis
ENSMALG00000016399	pum1	90	98.795	ENSGMOG00000010491	pum1	85	98.795	Gadus_morhua
ENSMALG00000016399	pum1	100	91.566	ENSGALG00000042598	PUM1	90	88.506	Gallus_gallus
ENSMALG00000016399	pum1	100	96.939	ENSGAFG00000015617	pum1	100	96.939	Gambusia_affinis
ENSMALG00000016399	pum1	100	98.795	ENSGACG00000005717	pum1	85	98.795	Gasterosteus_aculeatus
ENSMALG00000016399	pum1	100	91.807	ENSGAGG00000001290	PUM1	99	88.736	Gopherus_agassizii
ENSMALG00000016399	pum1	100	91.084	ENSGGOG00000011983	PUM1	90	88.506	Gorilla_gorilla
ENSMALG00000016399	pum1	100	76.880	ENSHBUG00000018718	pum1	85	99.036	Haplochromis_burtoni
ENSMALG00000016399	pum1	100	90.534	ENSHGLG00000013819	Pum1	90	88.046	Heterocephalus_glaber_female
ENSMALG00000016399	pum1	100	90.534	ENSHGLG00100008621	Pum1	90	88.046	Heterocephalus_glaber_male
ENSMALG00000016399	pum1	100	95.422	ENSIPUG00000020421	pum1	84	93.735	Ictalurus_punctatus
ENSMALG00000016399	pum1	100	90.843	ENSSTOG00000010757	PUM1	90	88.276	Ictidomys_tridecemlineatus
ENSMALG00000016399	pum1	73	91.525	ENSJJAG00000000530	Pum1	90	88.506	Jaculus_jaculus
ENSMALG00000016399	pum1	100	98.554	ENSKMAG00000003481	pum1	85	98.554	Kryptolebias_marmoratus
ENSMALG00000016399	pum1	100	99.518	ENSLBEG00000002527	pum1	85	99.518	Labrus_bergylta
ENSMALG00000016399	pum1	100	83.971	ENSLACG00000017188	PUM1	86	79.909	Latimeria_chalumnae
ENSMALG00000016399	pum1	100	91.084	ENSMFAG00000010291	PUM1	90	88.506	Macaca_fascicularis
ENSMALG00000016399	pum1	100	91.084	ENSMMUG00000013520	PUM1	90	88.506	Macaca_mulatta
ENSMALG00000016399	pum1	100	91.084	ENSMNEG00000034639	PUM1	90	88.506	Macaca_nemestrina
ENSMALG00000016399	pum1	100	91.084	ENSMLEG00000038743	PUM1	89	88.506	Mandrillus_leucophaeus
ENSMALG00000016399	pum1	100	78.063	ENSMZEG00005005834	pum1	85	99.036	Maylandia_zebra
ENSMALG00000016399	pum1	100	91.566	ENSMGAG00000000724	PUM1	90	88.506	Meleagris_gallopavo
ENSMALG00000016399	pum1	100	90.557	ENSMICG00000012213	-	89	86.143	Microcebus_murinus
ENSMALG00000016399	pum1	100	90.843	ENSMICG00000007713	-	90	88.276	Microcebus_murinus
ENSMALG00000016399	pum1	100	90.843	ENSMOCG00000015463	Pum1	90	88.276	Microtus_ochrogaster
ENSMALG00000016399	pum1	100	90.937	ENSMMOG00000019817	pum1	100	90.937	Mola_mola
ENSMALG00000016399	pum1	100	91.325	ENSMODG00000017067	PUM1	86	88.046	Monodelphis_domestica
ENSMALG00000016399	pum1	100	91.525	MGP_CAROLIEiJ_G0026549	Pum1	90	88.915	Mus_caroli
ENSMALG00000016399	pum1	100	91.283	ENSMUSG00000028580	Pum1	90	88.684	Mus_musculus
ENSMALG00000016399	pum1	100	91.283	MGP_PahariEiJ_G0028881	Pum1	90	88.684	Mus_pahari
ENSMALG00000016399	pum1	100	91.283	MGP_SPRETEiJ_G0027529	Pum1	90	88.684	Mus_spretus
ENSMALG00000016399	pum1	100	91.566	ENSMPUG00000015454	PUM1	90	88.506	Mustela_putorius_furo
ENSMALG00000016399	pum1	100	91.525	ENSMLUG00000006490	PUM1	90	88.915	Myotis_lucifugus
ENSMALG00000016399	pum1	100	90.843	ENSNGAG00000002378	Pum1	90	88.276	Nannospalax_galili
ENSMALG00000016399	pum1	100	77.778	ENSNLEG00000001151	PUM1	87	85.517	Nomascus_leucogenys
ENSMALG00000016399	pum1	79	91.589	ENSOPRG00000001776	PUM1	54	91.589	Ochotona_princeps
ENSMALG00000016399	pum1	100	90.843	ENSODEG00000003465	PUM1	90	88.276	Octodon_degus
ENSMALG00000016399	pum1	100	99.038	ENSONIG00000002290	pum1	85	99.277	Oreochromis_niloticus
ENSMALG00000016399	pum1	92	64.191	ENSOANG00000004902	-	92	64.267	Ornithorhynchus_anatinus
ENSMALG00000016399	pum1	99	91.241	ENSOCUG00000008641	PUM1	89	88.631	Oryctolagus_cuniculus
ENSMALG00000016399	pum1	100	98.072	ENSORLG00000011482	pum1	85	98.072	Oryzias_latipes
ENSMALG00000016399	pum1	100	98.072	ENSORLG00020019461	pum1	85	98.072	Oryzias_latipes_hni
ENSMALG00000016399	pum1	100	98.072	ENSORLG00015011375	pum1	85	98.072	Oryzias_latipes_hsok
ENSMALG00000016399	pum1	100	93.712	ENSOMEG00000009312	pum1	100	93.712	Oryzias_melastigma
ENSMALG00000016399	pum1	100	91.084	ENSOARG00000001899	PUM1	90	88.506	Ovis_aries
ENSMALG00000016399	pum1	100	91.084	ENSPPAG00000044003	PUM1	90	88.506	Pan_paniscus
ENSMALG00000016399	pum1	100	91.084	ENSPPRG00000001370	PUM1	87	88.506	Panthera_pardus
ENSMALG00000016399	pum1	100	91.084	ENSPTIG00000010798	PUM1	87	88.506	Panthera_tigris_altaica
ENSMALG00000016399	pum1	100	91.084	ENSPTRG00000000453	PUM1	90	88.506	Pan_troglodytes
ENSMALG00000016399	pum1	100	91.084	ENSPANG00000016338	PUM1	90	88.506	Papio_anubis
ENSMALG00000016399	pum1	100	92.530	ENSPKIG00000010578	pum1	84	92.289	Paramormyrops_kingsleyae
ENSMALG00000016399	pum1	100	91.807	ENSPSIG00000014118	PUM1	90	88.736	Pelodiscus_sinensis
ENSMALG00000016399	pum1	100	91.325	ENSPCIG00000014151	PUM1	86	88.046	Phascolarctos_cinereus
ENSMALG00000016399	pum1	100	98.072	ENSPFOG00000007289	pum1	90	98.072	Poecilia_formosa
ENSMALG00000016399	pum1	100	98.072	ENSPLAG00000007256	pum1	86	98.072	Poecilia_latipinna
ENSMALG00000016399	pum1	100	98.072	ENSPREG00000005195	pum1	85	98.072	Poecilia_reticulata
ENSMALG00000016399	pum1	100	91.084	ENSPPYG00000001621	PUM1	90	88.506	Pongo_abelii
ENSMALG00000016399	pum1	81	92.901	ENSPCAG00000001979	PUM1	64	92.901	Procavia_capensis
ENSMALG00000016399	pum1	100	90.843	ENSPCOG00000004398	PUM1	90	88.276	Propithecus_coquereli
ENSMALG00000016399	pum1	100	85.301	ENSPVAG00000005207	PUM1	87	82.989	Pteropus_vampyrus
ENSMALG00000016399	pum1	100	93.381	ENSPNYG00000009518	pum1	100	93.177	Pundamilia_nyererei
ENSMALG00000016399	pum1	100	82.664	ENSRNOG00000011709	Pum1	90	88.684	Rattus_norvegicus
ENSMALG00000016399	pum1	100	91.084	ENSRBIG00000042521	PUM1	90	88.506	Rhinopithecus_bieti
ENSMALG00000016399	pum1	100	91.525	ENSRROG00000020156	PUM1	90	88.915	Rhinopithecus_roxellana
ENSMALG00000016399	pum1	100	91.084	ENSSBOG00000032037	PUM1	90	88.506	Saimiri_boliviensis_boliviensis
ENSMALG00000016399	pum1	100	91.325	ENSSHAG00000010918	PUM1	86	88.046	Sarcophilus_harrisii
ENSMALG00000016399	pum1	100	99.518	ENSSMAG00000010918	pum1	100	96.640	Scophthalmus_maximus
ENSMALG00000016399	pum1	100	99.518	ENSSDUG00000009021	pum1	85	99.518	Seriola_dumerili
ENSMALG00000016399	pum1	92	99.518	ENSSLDG00000009667	pum1	84	99.518	Seriola_lalandi_dorsalis
ENSMALG00000016399	pum1	92	91.084	ENSSARG00000003055	PUM1	81	88.506	Sorex_araneus
ENSMALG00000016399	pum1	100	91.566	ENSSPUG00000006267	PUM1	90	88.506	Sphenodon_punctatus
ENSMALG00000016399	pum1	100	98.167	ENSSPAG00000016636	pum1	100	98.167	Stegastes_partitus
ENSMALG00000016399	pum1	100	91.525	ENSSSCG00000003591	PUM1	90	88.506	Sus_scrofa
ENSMALG00000016399	pum1	74	90.244	ENSTBEG00000013810	PUM1	71	90.244	Tupaia_belangeri
ENSMALG00000016399	pum1	100	90.602	ENSTTRG00000007436	PUM1	87	88.046	Tursiops_truncatus
ENSMALG00000016399	pum1	98	90.615	ENSUAMG00000018262	-	89	49.594	Ursus_americanus
ENSMALG00000016399	pum1	100	79.000	ENSUMAG00000009211	PUM1	89	77.355	Ursus_maritimus
ENSMALG00000016399	pum1	91	91.084	ENSVPAG00000005902	PUM1	82	88.506	Vicugna_pacos
ENSMALG00000016399	pum1	100	91.084	ENSVVUG00000014631	PUM1	90	88.506	Vulpes_vulpes
ENSMALG00000016399	pum1	100	82.169	ENSXETG00000012904	pum1	89	79.540	Xenopus_tropicalis