EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000016569 (Gene tree)
Gene ID: 109966023
Gene Symbol: raver1
Alias: zgc:112236
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 12147 bases
Position: chrKV884793.1:2312427-2324573
Accession: 109966023
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000023759	RRM_1	PF00076.22	6.2e-30	1	2
ENSMALP00000023759	RRM_1	PF00076.22	6.2e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000024210	-	5326	XM_020610571	ENSMALP00000023759	734 (aa)	XP_020466227	UPI0009B2F0BA

Gene Model

Click here to download ENSMALG00000016569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000016569's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000016569	raver1	73	47.035	ENSMALG00000018093	raver2	75	53.678

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000016569	raver1	56	64.988	ENSG00000161847	RAVER1	99	50.602	Homo_sapiens
ENSMALG00000016569	raver1	98	83.705	ENSAPOG00000017267	raver1	92	81.918	Acanthochromis_polyacanthus
ENSMALG00000016569	raver1	98	84.937	ENSAOCG00000005128	raver1	97	83.128	Amphiprion_ocellaris
ENSMALG00000016569	raver1	98	84.903	ENSAPEG00000010854	raver1	100	83.106	Amphiprion_percula
ENSMALG00000016569	raver1	99	85.477	ENSATEG00000021004	raver1	100	83.651	Anabas_testudineus
ENSMALG00000016569	raver1	80	49.600	ENSACAG00000008386	-	91	49.608	Anolis_carolinensis
ENSMALG00000016569	raver1	82	59.570	ENSANAG00000028226	RAVER1	80	58.008	Aotus_nancymaae
ENSMALG00000016569	raver1	100	81.361	ENSACLG00000018492	raver1	95	81.361	Astatotilapia_calliptera
ENSMALG00000016569	raver1	98	64.979	ENSAMXG00000005132	raver1	100	65.020	Astyanax_mexicanus
ENSMALG00000016569	raver1	81	82.000	ENSBTAG00000015721	RAVER1	93	68.056	Bos_taurus
ENSMALG00000016569	raver1	82	58.869	ENSCJAG00000005671	RAVER1	96	49.933	Callithrix_jacchus
ENSMALG00000016569	raver1	93	49.401	ENSCAFG00000017861	RAVER1	95	50.904	Canis_familiaris
ENSMALG00000016569	raver1	93	49.401	ENSCAFG00020024449	RAVER1	98	50.904	Canis_lupus_dingo
ENSMALG00000016569	raver1	68	65.207	ENSCHIG00000006718	RAVER1	98	49.260	Capra_hircus
ENSMALG00000016569	raver1	75	56.438	ENSCAPG00000002269	RAVER1	93	48.763	Cavia_aperea
ENSMALG00000016569	raver1	82	56.371	ENSCPOG00000001008	RAVER1	98	49.659	Cavia_porcellus
ENSMALG00000016569	raver1	93	50.991	ENSCPBG00000005349	-	98	50.991	Chrysemys_picta_bellii
ENSMALG00000016569	raver1	80	56.974	ENSCGRG00001013260	-	99	49.125	Cricetulus_griseus_chok1gshd
ENSMALG00000016569	raver1	80	56.974	ENSCGRG00000015138	-	99	49.125	Cricetulus_griseus_crigri
ENSMALG00000016569	raver1	98	74.074	ENSCSEG00000021092	raver1	100	73.016	Cynoglossus_semilaevis
ENSMALG00000016569	raver1	100	77.038	ENSCVAG00000013971	raver1	100	75.904	Cyprinodon_variegatus
ENSMALG00000016569	raver1	99	67.541	ENSDARG00000052617	raver1	100	66.667	Danio_rerio
ENSMALG00000016569	raver1	56	62.783	ENSDNOG00000035742	-	57	60.661	Dasypus_novemcinctus
ENSMALG00000016569	raver1	67	62.278	ENSDORG00000010106	-	98	46.338	Dipodomys_ordii
ENSMALG00000016569	raver1	50	50.943	ENSETEG00000008201	-	67	48.787	Echinops_telfairi
ENSMALG00000016569	raver1	53	66.154	ENSEASG00005010544	-	65	67.409	Equus_asinus_asinus
ENSMALG00000016569	raver1	69	65.281	ENSECAG00000024966	RAVER1	80	56.836	Equus_caballus
ENSMALG00000016569	raver1	99	73.379	ENSELUG00000023287	raver1	100	73.370	Esox_lucius
ENSMALG00000016569	raver1	55	64.806	ENSFCAG00000009435	RAVER1	96	50.270	Felis_catus
ENSMALG00000016569	raver1	95	70.195	ENSGMOG00000003649	raver1	100	70.195	Gadus_morhua
ENSMALG00000016569	raver1	65	39.516	ENSGALG00000050608	-	51	38.677	Gallus_gallus
ENSMALG00000016569	raver1	100	78.290	ENSGAFG00000015944	raver1	100	76.526	Gambusia_affinis
ENSMALG00000016569	raver1	95	73.025	ENSGACG00000013818	raver1	100	73.706	Gasterosteus_aculeatus
ENSMALG00000016569	raver1	83	64.573	ENSGAGG00000011748	-	93	66.667	Gopherus_agassizii
ENSMALG00000016569	raver1	99	81.370	ENSHBUG00000021210	raver1	94	81.370	Haplochromis_burtoni
ENSMALG00000016569	raver1	79	57.685	ENSHGLG00000015460	RAVER1	81	57.647	Heterocephalus_glaber_female
ENSMALG00000016569	raver1	79	57.685	ENSHGLG00100000812	RAVER1	81	57.647	Heterocephalus_glaber_male
ENSMALG00000016569	raver1	100	73.777	ENSHCOG00000000449	raver1	98	73.171	Hippocampus_comes
ENSMALG00000016569	raver1	98	68.050	ENSIPUG00000013153	raver1	100	67.619	Ictalurus_punctatus
ENSMALG00000016569	raver1	82	58.090	ENSSTOG00000003241	RAVER1	98	50.740	Ictidomys_tridecemlineatus
ENSMALG00000016569	raver1	91	50.000	ENSJJAG00000018219	-	96	50.972	Jaculus_jaculus
ENSMALG00000016569	raver1	100	78.776	ENSKMAG00000017355	raver1	100	77.007	Kryptolebias_marmoratus
ENSMALG00000016569	raver1	93	84.389	ENSLBEG00000008268	raver1	96	82.474	Labrus_bergylta
ENSMALG00000016569	raver1	85	49.433	ENSLACG00000005809	-	99	49.858	Latimeria_chalumnae
ENSMALG00000016569	raver1	98	59.610	ENSLOCG00000007500	raver1	100	58.493	Lepisosteus_oculatus
ENSMALG00000016569	raver1	73	82.000	ENSLAFG00000003664	-	90	82.000	Loxodonta_africana
ENSMALG00000016569	raver1	55	62.347	ENSMMUG00000014897	RAVER1	96	49.730	Macaca_mulatta
ENSMALG00000016569	raver1	99	85.754	ENSMAMG00000012059	raver1	100	84.060	Mastacembelus_armatus
ENSMALG00000016569	raver1	100	81.361	ENSMZEG00005019002	raver1	100	81.361	Maylandia_zebra
ENSMALG00000016569	raver1	80	56.863	ENSMAUG00000017948	-	82	57.364	Mesocricetus_auratus
ENSMALG00000016569	raver1	93	51.613	ENSMICG00000010326	RAVER1	98	51.806	Microcebus_murinus
ENSMALG00000016569	raver1	80	58.400	ENSMOCG00000015553	-	99	49.798	Microtus_ochrogaster
ENSMALG00000016569	raver1	99	82.019	ENSMMOG00000012093	raver1	100	80.245	Mola_mola
ENSMALG00000016569	raver1	90	49.356	ENSMODG00000005584	-	87	49.927	Monodelphis_domestica
ENSMALG00000016569	raver1	80	56.481	MGP_PahariEiJ_G0014726	-	99	49.217	Mus_pahari
ENSMALG00000016569	raver1	68	56.923	ENSMLUG00000012328	RAVER1	98	50.551	Myotis_lucifugus
ENSMALG00000016569	raver1	80	54.630	ENSNGAG00000001260	-	99	49.007	Nannospalax_galili
ENSMALG00000016569	raver1	100	73.333	ENSNBRG00000010139	raver1	100	72.789	Neolamprologus_brichardi
ENSMALG00000016569	raver1	74	59.031	ENSMEUG00000003281	-	84	57.709	Notamacropus_eugenii
ENSMALG00000016569	raver1	62	82.000	ENSODEG00000016260	RAVER1	80	53.684	Octodon_degus
ENSMALG00000016569	raver1	92	79.941	ENSONIG00000001559	raver1	99	81.169	Oreochromis_niloticus
ENSMALG00000016569	raver1	80	57.086	ENSOCUG00000020918	RAVER1	98	48.904	Oryctolagus_cuniculus
ENSMALG00000016569	raver1	100	77.520	ENSORLG00000005458	raver1	100	75.749	Oryzias_latipes
ENSMALG00000016569	raver1	100	77.929	ENSORLG00020004392	raver1	100	76.158	Oryzias_latipes_hni
ENSMALG00000016569	raver1	100	78.065	ENSORLG00015017222	raver1	100	76.294	Oryzias_latipes_hsok
ENSMALG00000016569	raver1	94	97.959	ENSOMEG00000023956	raver1	100	97.959	Oryzias_melastigma
ENSMALG00000016569	raver1	75	82.000	ENSOARG00000015886	RAVER1	96	47.275	Ovis_aries
ENSMALG00000016569	raver1	55	64.806	ENSPPRG00000009912	RAVER1	67	62.864	Panthera_pardus
ENSMALG00000016569	raver1	80	57.171	ENSPEMG00000016411	-	99	49.191	Peromyscus_maniculatus_bairdii
ENSMALG00000016569	raver1	93	52.983	ENSPCIG00000018695	-	98	53.125	Phascolarctos_cinereus
ENSMALG00000016569	raver1	100	76.604	ENSPFOG00000007016	raver1	100	76.471	Poecilia_formosa
ENSMALG00000016569	raver1	95	75.857	ENSPLAG00000020793	raver1	99	74.000	Poecilia_latipinna
ENSMALG00000016569	raver1	100	77.612	ENSPMEG00000011220	raver1	100	75.848	Poecilia_mexicana
ENSMALG00000016569	raver1	100	73.098	ENSPREG00000006864	raver1	100	71.467	Poecilia_reticulata
ENSMALG00000016569	raver1	72	82.000	ENSPVAG00000003689	RAVER1	98	49.658	Pteropus_vampyrus
ENSMALG00000016569	raver1	100	75.238	ENSPNYG00000013284	raver1	100	74.694	Pundamilia_nyererei
ENSMALG00000016569	raver1	98	69.220	ENSPNAG00000015476	raver1	100	68.775	Pygocentrus_nattereri
ENSMALG00000016569	raver1	66	56.725	ENSRNOG00000020710	Raver1	99	50.066	Rattus_norvegicus
ENSMALG00000016569	raver1	94	50.477	ENSRBIG00000034702	RAVER1	96	50.970	Rhinopithecus_bieti
ENSMALG00000016569	raver1	94	51.230	ENSRROG00000031186	RAVER1	96	50.970	Rhinopithecus_roxellana
ENSMALG00000016569	raver1	93	51.934	ENSSBOG00000023423	RAVER1	96	51.117	Saimiri_boliviensis_boliviensis
ENSMALG00000016569	raver1	85	51.750	ENSSHAG00000008181	-	90	52.134	Sarcophilus_harrisii
ENSMALG00000016569	raver1	99	84.966	ENSSMAG00000004546	raver1	100	83.668	Scophthalmus_maximus
ENSMALG00000016569	raver1	99	88.382	ENSSDUG00000021063	raver1	100	86.512	Seriola_dumerili
ENSMALG00000016569	raver1	99	88.105	ENSSLDG00000014505	raver1	100	86.240	Seriola_lalandi_dorsalis
ENSMALG00000016569	raver1	99	84.647	ENSSPAG00000000688	raver1	100	82.970	Stegastes_partitus
ENSMALG00000016569	raver1	75	82.000	ENSSSCG00000013650	-	80	82.000	Sus_scrofa
ENSMALG00000016569	raver1	99	78.591	ENSTRUG00000025641	raver1	100	78.503	Takifugu_rubripes
ENSMALG00000016569	raver1	93	49.401	ENSVVUG00000028976	RAVER1	95	50.904	Vulpes_vulpes
ENSMALG00000016569	raver1	93	49.577	ENSXETG00000011622	raver1	96	48.596	Xenopus_tropicalis
ENSMALG00000016569	raver1	100	78.562	ENSXCOG00000016368	raver1	100	76.798	Xiphophorus_couchianus
ENSMALG00000016569	raver1	100	78.697	ENSXMAG00000000217	raver1	100	78.697	Xiphophorus_maculatus