EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000016581 (Gene tree)
Gene ID: 109957729
Gene Symbol: -
Alias: -
Full Name: roquin-1-like
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 11167 bases
Position: chrKV884716.1:1030262-1041428
Accession: 109957729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000023807	zf-CCCH	PF00642.24	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000024258	-	1359	XM_020595859	ENSMALP00000023807	452 (aa)	XP_020451515	-

Gene Model

Click here to download ENSMALG00000016581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000016581's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000016581	-	98	77.232	ENSMALG00000017885	rc3h2	93	77.232
ENSMALG00000016581	-	99	97.143	ENSMALG00000016106	rc3h1b	94	97.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000016581	-	97	92.466	ENSCAFG00020017112	RC3H1	99	92.466	Canis_lupus_dingo
ENSMALG00000016581	-	98	95.133	ENSHCOG00000009753	rc3h1b	94	95.133	Hippocampus_comes
ENSMALG00000016581	-	97	98.202	ENSPMGG00000015037	rc3h1b	91	98.202	Periophthalmus_magnuspinnatus
ENSMALG00000016581	-	98	91.196	ENSPCIG00000002058	RC3H1	95	91.196	Phascolarctos_cinereus
ENSMALG00000016581	-	97	95.918	ENSPNAG00000017240	rc3h1b	94	95.918	Pygocentrus_nattereri
ENSMALG00000016581	-	97	92.955	ENSPNAG00000023439	rc3h1a	96	92.342	Pygocentrus_nattereri
ENSMALG00000016581	-	97	92.466	ENSVVUG00000014201	RC3H1	91	92.466	Vulpes_vulpes