EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000016778 (Gene tree)
Gene ID: 109968566
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 6909 bases
Position: chrKV884842.1:1221780-1228688
Accession: 109968566
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000024082	RRM_1	PF00076.22	5.7e-27	1	2
ENSMALP00000024082	RRM_1	PF00076.22	5.7e-27	2	2
ENSMALP00000024064	RRM_1	PF00076.22	9.3e-27	1	2
ENSMALP00000024064	RRM_1	PF00076.22	9.3e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000024519	-	4161	XM_020614914	ENSMALP00000024064	310 (aa)	XP_020470570	UPI0009B47942
ENSMALT00000024537	-	813	-	ENSMALP00000024082	270 (aa)	-	-

Gene Model

Click here to download ENSMALG00000016778's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000016778's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000016778	trnau1apa	66	30.380	ENSMALG00000006066	pabpc1b	61	30.380
ENSMALG00000016778	trnau1apa	66	30.380	ENSMALG00000011017	pabpc4	57	30.380
ENSMALG00000016778	trnau1apa	93	43.581	ENSMALG00000003772	trnau1apb	94	45.246
ENSMALG00000016778	trnau1apa	59	30.233	ENSMALG00000017478	tia1l	61	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000016778	trnau1apa	94	58.362	ENSG00000180098	TRNAU1AP	96	61.092	Homo_sapiens
ENSMALG00000016778	trnau1apa	100	87.821	ENSAPOG00000007148	TRNAU1AP	100	87.821	Acanthochromis_polyacanthus
ENSMALG00000016778	trnau1apa	94	58.703	ENSAMEG00000011367	TRNAU1AP	96	61.092	Ailuropoda_melanoleuca
ENSMALG00000016778	trnau1apa	91	96.629	ENSACIG00000004161	trnau1apa	93	97.297	Amphilophus_citrinellus
ENSMALG00000016778	trnau1apa	100	88.103	ENSAOCG00000008056	trnau1apa	100	88.103	Amphiprion_ocellaris
ENSMALG00000016778	trnau1apa	100	88.103	ENSAPEG00000008868	trnau1apa	100	88.103	Amphiprion_percula
ENSMALG00000016778	trnau1apa	100	89.841	ENSATEG00000012140	trnau1apa	100	89.841	Anabas_testudineus
ENSMALG00000016778	trnau1apa	92	57.639	ENSAPLG00000002606	TRNAU1AP	99	58.537	Anas_platyrhynchos
ENSMALG00000016778	trnau1apa	93	48.464	ENSACAG00000003995	-	95	49.315	Anolis_carolinensis
ENSMALG00000016778	trnau1apa	70	39.091	ENSACAG00000004205	-	84	37.712	Anolis_carolinensis
ENSMALG00000016778	trnau1apa	94	58.362	ENSANAG00000018976	TRNAU1AP	96	61.092	Aotus_nancymaae
ENSMALG00000016778	trnau1apa	100	84.887	ENSACLG00000018515	trnau1apa	100	84.887	Astatotilapia_calliptera
ENSMALG00000016778	trnau1apa	92	71.591	ENSAMXG00000029240	-	95	72.973	Astyanax_mexicanus
ENSMALG00000016778	trnau1apa	94	56.271	ENSAMXG00000013750	trnau1apa	91	55.593	Astyanax_mexicanus
ENSMALG00000016778	trnau1apa	94	58.020	ENSBTAG00000010393	TRNAU1AP	96	60.751	Bos_taurus
ENSMALG00000016778	trnau1apa	94	58.362	ENSCJAG00000009717	TRNAU1AP	96	61.092	Callithrix_jacchus
ENSMALG00000016778	trnau1apa	94	58.362	ENSCAFG00000011735	TRNAU1AP	96	61.092	Canis_familiaris
ENSMALG00000016778	trnau1apa	94	58.362	ENSCAFG00020023584	TRNAU1AP	96	61.092	Canis_lupus_dingo
ENSMALG00000016778	trnau1apa	99	56.311	ENSCHIG00000023215	TRNAU1AP	99	58.900	Capra_hircus
ENSMALG00000016778	trnau1apa	94	58.362	ENSTSYG00000003506	TRNAU1AP	96	61.092	Carlito_syrichta
ENSMALG00000016778	trnau1apa	94	58.362	ENSCPOG00000001925	TRNAU1AP	96	61.092	Cavia_porcellus
ENSMALG00000016778	trnau1apa	94	58.362	ENSCCAG00000037506	TRNAU1AP	96	61.092	Cebus_capucinus
ENSMALG00000016778	trnau1apa	94	58.362	ENSCATG00000044617	TRNAU1AP	96	61.092	Cercocebus_atys
ENSMALG00000016778	trnau1apa	94	58.362	ENSCLAG00000008223	TRNAU1AP	96	61.092	Chinchilla_lanigera
ENSMALG00000016778	trnau1apa	94	58.362	ENSCSAG00000001014	TRNAU1AP	96	61.092	Chlorocebus_sabaeus
ENSMALG00000016778	trnau1apa	90	56.338	ENSCPBG00000000121	TRNAU1AP	96	58.007	Chrysemys_picta_bellii
ENSMALG00000016778	trnau1apa	55	48.555	ENSCSAVG00000011781	-	89	48.824	Ciona_savignyi
ENSMALG00000016778	trnau1apa	93	53.030	ENSCANG00000041949	TRNAU1AP	94	57.297	Colobus_angolensis_palliatus
ENSMALG00000016778	trnau1apa	94	58.362	ENSCGRG00001004713	Trnau1ap	96	61.092	Cricetulus_griseus_chok1gshd
ENSMALG00000016778	trnau1apa	94	58.362	ENSCGRG00000014532	Trnau1ap	96	61.092	Cricetulus_griseus_crigri
ENSMALG00000016778	trnau1apa	100	79.936	ENSCSEG00000006663	trnau1apa	100	79.618	Cynoglossus_semilaevis
ENSMALG00000016778	trnau1apa	99	80.906	ENSCVAG00000018069	trnau1apa	99	82.201	Cyprinodon_variegatus
ENSMALG00000016778	trnau1apa	99	51.456	ENSDARG00000101323	trnau1apa	89	51.027	Danio_rerio
ENSMALG00000016778	trnau1apa	55	59.884	ENSDNOG00000047959	-	89	59.884	Dasypus_novemcinctus
ENSMALG00000016778	trnau1apa	94	58.362	ENSDNOG00000033009	TRNAU1AP	96	61.092	Dasypus_novemcinctus
ENSMALG00000016778	trnau1apa	92	56.877	ENSDORG00000006349	Trnau1ap	97	60.744	Dipodomys_ordii
ENSMALG00000016778	trnau1apa	93	35.583	FBgn0031607	CG15440	50	47.904	Drosophila_melanogaster
ENSMALG00000016778	trnau1apa	80	54.800	ENSETEG00000012594	TRNAU1AP	95	58.000	Echinops_telfairi
ENSMALG00000016778	trnau1apa	62	47.222	ENSEBUG00000006349	-	58	46.591	Eptatretus_burgeri
ENSMALG00000016778	trnau1apa	94	58.362	ENSEASG00005010062	TRNAU1AP	90	68.493	Equus_asinus_asinus
ENSMALG00000016778	trnau1apa	94	58.362	ENSECAG00000012980	TRNAU1AP	90	68.493	Equus_caballus
ENSMALG00000016778	trnau1apa	100	74.121	ENSELUG00000017686	trnau1apa	100	74.522	Esox_lucius
ENSMALG00000016778	trnau1apa	93	80.682	ENSELUG00000022790	-	95	81.081	Esox_lucius
ENSMALG00000016778	trnau1apa	94	58.362	ENSFCAG00000013401	TRNAU1AP	96	61.092	Felis_catus
ENSMALG00000016778	trnau1apa	90	57.092	ENSFALG00000001371	TRNAU1AP	96	57.447	Ficedula_albicollis
ENSMALG00000016778	trnau1apa	99	56.634	ENSFDAG00000018599	TRNAU1AP	99	59.223	Fukomys_damarensis
ENSMALG00000016778	trnau1apa	78	86.640	ENSFHEG00000018232	trnau1apa	86	82.890	Fundulus_heteroclitus
ENSMALG00000016778	trnau1apa	100	66.242	ENSGMOG00000016508	trnau1apa	99	66.242	Gadus_morhua
ENSMALG00000016778	trnau1apa	94	57.679	ENSGALG00000001310	-	96	58.020	Gallus_gallus
ENSMALG00000016778	trnau1apa	69	39.819	ENSGALG00000012721	C2H6orf52	90	38.843	Gallus_gallus
ENSMALG00000016778	trnau1apa	80	87.903	ENSGAFG00000004928	trnau1apa	97	86.434	Gambusia_affinis
ENSMALG00000016778	trnau1apa	100	90.645	ENSGACG00000001443	trnau1apa	100	90.645	Gasterosteus_aculeatus
ENSMALG00000016778	trnau1apa	90	57.651	ENSGAGG00000004940	TRNAU1AP	96	57.651	Gopherus_agassizii
ENSMALG00000016778	trnau1apa	94	58.362	ENSGGOG00000003511	TRNAU1AP	96	61.092	Gorilla_gorilla
ENSMALG00000016778	trnau1apa	100	97.778	ENSHBUG00000002510	trnau1apa	94	97.778	Haplochromis_burtoni
ENSMALG00000016778	trnau1apa	94	58.362	ENSHGLG00000010380	TRNAU1AP	96	61.092	Heterocephalus_glaber_female
ENSMALG00000016778	trnau1apa	94	56.314	ENSHGLG00100012699	TRNAU1AP	96	59.044	Heterocephalus_glaber_male
ENSMALG00000016778	trnau1apa	99	73.482	ENSHCOG00000014770	trnau1apa	99	71.565	Hippocampus_comes
ENSMALG00000016778	trnau1apa	94	58.362	ENSSTOG00000000079	TRNAU1AP	96	61.092	Ictidomys_tridecemlineatus
ENSMALG00000016778	trnau1apa	94	58.362	ENSJJAG00000010128	Trnau1ap	96	61.092	Jaculus_jaculus
ENSMALG00000016778	trnau1apa	100	85.531	ENSKMAG00000001230	trnau1apa	100	85.531	Kryptolebias_marmoratus
ENSMALG00000016778	trnau1apa	100	82.390	ENSLBEG00000011683	trnau1apa	100	82.075	Labrus_bergylta
ENSMALG00000016778	trnau1apa	94	52.041	ENSLACG00000005541	TRNAU1AP	96	53.378	Latimeria_chalumnae
ENSMALG00000016778	trnau1apa	99	60.714	ENSLOCG00000004041	trnau1apa	99	58.766	Lepisosteus_oculatus
ENSMALG00000016778	trnau1apa	94	58.703	ENSLAFG00000007628	TRNAU1AP	96	61.433	Loxodonta_africana
ENSMALG00000016778	trnau1apa	94	69.630	ENSMFAG00000043751	TRNAU1AP	96	61.092	Macaca_fascicularis
ENSMALG00000016778	trnau1apa	94	58.362	ENSMMUG00000006561	TRNAU1AP	96	61.092	Macaca_mulatta
ENSMALG00000016778	trnau1apa	94	69.630	ENSMNEG00000044201	TRNAU1AP	96	61.092	Macaca_nemestrina
ENSMALG00000016778	trnau1apa	94	69.630	ENSMLEG00000015649	TRNAU1AP	96	61.092	Mandrillus_leucophaeus
ENSMALG00000016778	trnau1apa	99	90.997	ENSMAMG00000001247	trnau1apa	100	93.248	Mastacembelus_armatus
ENSMALG00000016778	trnau1apa	100	84.887	ENSMZEG00005017722	trnau1apa	100	84.887	Maylandia_zebra
ENSMALG00000016778	trnau1apa	92	57.692	ENSMGAG00000002105	TRNAU1AP	96	58.042	Meleagris_gallopavo
ENSMALG00000016778	trnau1apa	94	58.362	ENSMICG00000008386	TRNAU1AP	96	61.092	Microcebus_murinus
ENSMALG00000016778	trnau1apa	94	58.362	ENSMOCG00000011189	Trnau1ap	96	61.092	Microtus_ochrogaster
ENSMALG00000016778	trnau1apa	100	81.362	ENSMMOG00000012107	trnau1apa	100	81.362	Mola_mola
ENSMALG00000016778	trnau1apa	94	59.386	ENSMODG00000010927	TRNAU1AP	96	60.616	Monodelphis_domestica
ENSMALG00000016778	trnau1apa	94	58.362	MGP_CAROLIEiJ_G0026563	Trnau1ap	97	67.568	Mus_caroli
ENSMALG00000016778	trnau1apa	94	58.362	ENSMUSG00000028898	Trnau1ap	97	67.568	Mus_musculus
ENSMALG00000016778	trnau1apa	94	58.362	MGP_PahariEiJ_G0028896	Trnau1ap	97	67.568	Mus_pahari
ENSMALG00000016778	trnau1apa	94	58.362	MGP_SPRETEiJ_G0027544	Trnau1ap	97	67.568	Mus_spretus
ENSMALG00000016778	trnau1apa	99	56.958	ENSMPUG00000015511	TRNAU1AP	99	59.547	Mustela_putorius_furo
ENSMALG00000016778	trnau1apa	94	58.362	ENSMLUG00000012586	TRNAU1AP	96	61.092	Myotis_lucifugus
ENSMALG00000016778	trnau1apa	94	59.386	ENSNGAG00000015881	Trnau1ap	96	60.959	Nannospalax_galili
ENSMALG00000016778	trnau1apa	99	75.433	ENSNBRG00000001758	trnau1apa	99	76.471	Neolamprologus_brichardi
ENSMALG00000016778	trnau1apa	94	58.362	ENSNLEG00000009822	TRNAU1AP	96	61.092	Nomascus_leucogenys
ENSMALG00000016778	trnau1apa	92	59.091	ENSMEUG00000006117	TRNAU1AP	96	60.351	Notamacropus_eugenii
ENSMALG00000016778	trnau1apa	52	63.514	ENSOPRG00000007084	-	55	63.636	Ochotona_princeps
ENSMALG00000016778	trnau1apa	94	58.362	ENSODEG00000002970	TRNAU1AP	96	61.092	Octodon_degus
ENSMALG00000016778	trnau1apa	80	87.200	ENSONIG00000004715	trnau1apa	97	87.200	Oreochromis_niloticus
ENSMALG00000016778	trnau1apa	93	47.279	ENSOANG00000005325	-	95	46.735	Ornithorhynchus_anatinus
ENSMALG00000016778	trnau1apa	94	56.997	ENSOCUG00000011704	-	96	59.727	Oryctolagus_cuniculus
ENSMALG00000016778	trnau1apa	94	50.680	ENSOCUG00000002353	-	96	51.027	Oryctolagus_cuniculus
ENSMALG00000016778	trnau1apa	86	47.388	ENSOCUG00000006834	-	97	47.547	Oryctolagus_cuniculus
ENSMALG00000016778	trnau1apa	100	78.778	ENSORLG00000010428	trnau1apa	100	79.421	Oryzias_latipes
ENSMALG00000016778	trnau1apa	100	78.778	ENSORLG00020000926	trnau1ap	100	79.421	Oryzias_latipes_hni
ENSMALG00000016778	trnau1apa	100	78.778	ENSORLG00015009858	trnau1ap	100	79.421	Oryzias_latipes_hsok
ENSMALG00000016778	trnau1apa	100	78.135	ENSOMEG00000007873	trnau1apa	100	78.457	Oryzias_melastigma
ENSMALG00000016778	trnau1apa	94	58.362	ENSOGAG00000002274	TRNAU1AP	96	61.092	Otolemur_garnettii
ENSMALG00000016778	trnau1apa	99	56.311	ENSOARG00000002843	TRNAU1AP	99	58.900	Ovis_aries
ENSMALG00000016778	trnau1apa	94	58.362	ENSPPAG00000033927	TRNAU1AP	96	61.092	Pan_paniscus
ENSMALG00000016778	trnau1apa	94	58.362	ENSPPRG00000004416	TRNAU1AP	96	61.092	Panthera_pardus
ENSMALG00000016778	trnau1apa	94	58.362	ENSPTIG00000016677	TRNAU1AP	96	61.092	Panthera_tigris_altaica
ENSMALG00000016778	trnau1apa	86	52.381	ENSPTRG00000000434	-	91	53.689	Pan_troglodytes
ENSMALG00000016778	trnau1apa	94	58.362	ENSPANG00000016019	TRNAU1AP	96	61.092	Papio_anubis
ENSMALG00000016778	trnau1apa	93	61.092	ENSPKIG00000015511	trnau1apa	93	60.690	Paramormyrops_kingsleyae
ENSMALG00000016778	trnau1apa	92	80.682	ENSPKIG00000022205	-	94	81.081	Paramormyrops_kingsleyae
ENSMALG00000016778	trnau1apa	90	58.099	ENSPSIG00000006864	TRNAU1AP	96	58.007	Pelodiscus_sinensis
ENSMALG00000016778	trnau1apa	97	70.000	ENSPMGG00000023893	trnau1apa	98	66.316	Periophthalmus_magnuspinnatus
ENSMALG00000016778	trnau1apa	94	58.020	ENSPEMG00000007877	Trnau1ap	96	60.751	Peromyscus_maniculatus_bairdii
ENSMALG00000016778	trnau1apa	75	51.724	ENSPMAG00000005934	trnau1apa	96	50.000	Petromyzon_marinus
ENSMALG00000016778	trnau1apa	59	51.445	ENSPMAG00000000592	trnau1apa	95	53.757	Petromyzon_marinus
ENSMALG00000016778	trnau1apa	99	82.524	ENSPFOG00000008100	trnau1apa	99	82.524	Poecilia_formosa
ENSMALG00000016778	trnau1apa	95	81.818	ENSPLAG00000010236	trnau1apa	99	81.818	Poecilia_latipinna
ENSMALG00000016778	trnau1apa	99	80.519	ENSPMEG00000016387	trnau1apa	97	80.519	Poecilia_mexicana
ENSMALG00000016778	trnau1apa	88	85.870	ENSPREG00000019821	trnau1apa	95	88.506	Poecilia_reticulata
ENSMALG00000016778	trnau1apa	85	50.000	ENSPPYG00000001639	-	96	53.008	Pongo_abelii
ENSMALG00000016778	trnau1apa	93	46.713	ENSPCOG00000023470	-	96	48.473	Propithecus_coquereli
ENSMALG00000016778	trnau1apa	94	58.362	ENSPCOG00000027712	-	96	61.092	Propithecus_coquereli
ENSMALG00000016778	trnau1apa	94	58.362	ENSPVAG00000017214	TRNAU1AP	96	61.092	Pteropus_vampyrus
ENSMALG00000016778	trnau1apa	100	85.185	ENSPNYG00000010130	trnau1apa	99	85.551	Pundamilia_nyererei
ENSMALG00000016778	trnau1apa	99	54.516	ENSPNAG00000024905	trnau1apa	97	52.564	Pygocentrus_nattereri
ENSMALG00000016778	trnau1apa	92	53.310	ENSRNOG00000055344	Trnau1ap	92	56.098	Rattus_norvegicus
ENSMALG00000016778	trnau1apa	94	58.362	ENSRBIG00000029083	TRNAU1AP	96	61.092	Rhinopithecus_bieti
ENSMALG00000016778	trnau1apa	94	58.362	ENSRROG00000029128	TRNAU1AP	96	61.092	Rhinopithecus_roxellana
ENSMALG00000016778	trnau1apa	94	58.362	ENSSBOG00000021299	TRNAU1AP	96	61.092	Saimiri_boliviensis_boliviensis
ENSMALG00000016778	trnau1apa	94	59.589	ENSSHAG00000008108	TRNAU1AP	96	60.616	Sarcophilus_harrisii
ENSMALG00000016778	trnau1apa	100	87.220	ENSSMAG00000020851	trnau1apa	100	88.818	Scophthalmus_maximus
ENSMALG00000016778	trnau1apa	100	91.111	ENSSDUG00000011734	trnau1apa	100	91.111	Seriola_dumerili
ENSMALG00000016778	trnau1apa	100	74.643	ENSSLDG00000012101	trnau1apa	99	74.516	Seriola_lalandi_dorsalis
ENSMALG00000016778	trnau1apa	92	58.392	ENSSARG00000007536	TRNAU1AP	96	61.053	Sorex_araneus
ENSMALG00000016778	trnau1apa	57	55.357	ENSSPUG00000010415	-	95	52.096	Sphenodon_punctatus
ENSMALG00000016778	trnau1apa	94	54.849	ENSSPUG00000010400	-	96	55.822	Sphenodon_punctatus
ENSMALG00000016778	trnau1apa	100	91.318	ENSSPAG00000005029	trnau1apa	100	91.318	Stegastes_partitus
ENSMALG00000016778	trnau1apa	94	58.362	ENSSSCG00000030284	TRNAU1AP	96	61.092	Sus_scrofa
ENSMALG00000016778	trnau1apa	68	41.063	ENSTGUG00000005908	-	99	41.063	Taeniopygia_guttata
ENSMALG00000016778	trnau1apa	92	57.692	ENSTGUG00000000735	-	96	58.042	Taeniopygia_guttata
ENSMALG00000016778	trnau1apa	100	82.581	ENSTRUG00000003352	trnau1apa	100	80.645	Takifugu_rubripes
ENSMALG00000016778	trnau1apa	100	78.387	ENSTNIG00000006129	trnau1apa	100	78.065	Tetraodon_nigroviridis
ENSMALG00000016778	trnau1apa	80	53.200	ENSTBEG00000008049	-	95	54.310	Tupaia_belangeri
ENSMALG00000016778	trnau1apa	94	58.362	ENSTTRG00000001854	TRNAU1AP	96	61.092	Tursiops_truncatus
ENSMALG00000016778	trnau1apa	90	58.156	ENSUAMG00000008789	TRNAU1AP	96	60.993	Ursus_americanus
ENSMALG00000016778	trnau1apa	94	58.362	ENSUMAG00000011068	TRNAU1AP	96	60.751	Ursus_maritimus
ENSMALG00000016778	trnau1apa	94	50.820	ENSVPAG00000006778	TRNAU1AP	97	53.443	Vicugna_pacos
ENSMALG00000016778	trnau1apa	94	57.534	ENSVVUG00000012518	TRNAU1AP	89	60.274	Vulpes_vulpes
ENSMALG00000016778	trnau1apa	99	82.201	ENSXMAG00000017361	trnau1apa	99	83.172	Xiphophorus_maculatus