EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000016926 (Gene tree)
Gene ID: 109966233
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Minus strand
Length: 6519 bases
Position: chrKV884692.1:3103822-3110340
Accession: 109966233
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000024263	RRM_1	PF00076.22	3.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000024720	PABPN1L-201	3495	XM_020610934	ENSMALP00000024263	262 (aa)	XP_020466590	UPI0009B4755C

Gene Model

Click here to download ENSMALG00000016926's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000016926's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000016926	PABPN1L	74	54.067	ENSMALG00000019612	pabpn1	52	60.390

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000016926	PABPN1L	71	50.500	ENSG00000205022	PABPN1L	60	53.571	Homo_sapiens
ENSMALG00000016926	PABPN1L	91	89.167	ENSAPOG00000000685	PABPN1L	78	87.083	Acanthochromis_polyacanthus
ENSMALG00000016926	PABPN1L	91	85.294	ENSACIG00000021400	PABPN1L	98	85.714	Amphilophus_citrinellus
ENSMALG00000016926	PABPN1L	100	91.255	ENSAOCG00000019844	PABPN1L	100	90.494	Amphiprion_ocellaris
ENSMALG00000016926	PABPN1L	100	90.875	ENSAPEG00000019534	PABPN1L	100	90.114	Amphiprion_percula
ENSMALG00000016926	PABPN1L	91	92.017	ENSATEG00000011646	PABPN1L	95	92.017	Anabas_testudineus
ENSMALG00000016926	PABPN1L	66	56.897	ENSACAG00000013250	PABPN1L	77	59.333	Anolis_carolinensis
ENSMALG00000016926	PABPN1L	75	52.941	ENSANAG00000038178	PABPN1L	73	50.000	Aotus_nancymaae
ENSMALG00000016926	PABPN1L	100	88.550	ENSACLG00000025147	PABPN1L	100	89.313	Astatotilapia_calliptera
ENSMALG00000016926	PABPN1L	55	74.306	ENSAMXG00000010873	PABPN1L	58	71.523	Astyanax_mexicanus
ENSMALG00000016926	PABPN1L	71	53.030	ENSCJAG00000045284	PABPN1L	62	53.846	Callithrix_jacchus
ENSMALG00000016926	PABPN1L	75	52.451	ENSCCAG00000027631	PABPN1L	61	55.556	Cebus_capucinus
ENSMALG00000016926	PABPN1L	71	51.485	ENSCATG00000031060	PABPN1L	61	54.167	Cercocebus_atys
ENSMALG00000016926	PABPN1L	58	51.553	ENSCLAG00000000704	PABPN1L	65	47.727	Chinchilla_lanigera
ENSMALG00000016926	PABPN1L	72	48.544	ENSCGRG00001013211	Pabpn1l	78	45.327	Cricetulus_griseus_chok1gshd
ENSMALG00000016926	PABPN1L	72	48.544	ENSCGRG00000015868	Pabpn1l	78	45.327	Cricetulus_griseus_crigri
ENSMALG00000016926	PABPN1L	100	82.510	ENSCSEG00000001142	pabpn1l	100	82.510	Cynoglossus_semilaevis
ENSMALG00000016926	PABPN1L	100	84.791	ENSCVAG00000015547	PABPN1L	100	85.171	Cyprinodon_variegatus
ENSMALG00000016926	PABPN1L	96	65.217	ENSELUG00000018385	PABPN1L	96	64.567	Esox_lucius
ENSMALG00000016926	PABPN1L	65	52.247	ENSFCAG00000010465	PABPN1L	61	53.216	Felis_catus
ENSMALG00000016926	PABPN1L	63	55.249	ENSFALG00000003319	PABPN1L	71	52.571	Ficedula_albicollis
ENSMALG00000016926	PABPN1L	58	54.430	ENSFDAG00000021067	PABPN1L	62	50.595	Fukomys_damarensis
ENSMALG00000016926	PABPN1L	100	85.496	ENSFHEG00000018295	PABPN1L	100	85.496	Fundulus_heteroclitus
ENSMALG00000016926	PABPN1L	100	72.556	ENSGMOG00000001475	PABPN1L	100	74.812	Gadus_morhua
ENSMALG00000016926	PABPN1L	55	60.417	ENSGALG00000006242	PABPN1L	70	61.789	Gallus_gallus
ENSMALG00000016926	PABPN1L	100	84.791	ENSGAFG00000012565	PABPN1L	100	85.171	Gambusia_affinis
ENSMALG00000016926	PABPN1L	100	82.772	ENSGACG00000015428	PABPN1L	100	82.772	Gasterosteus_aculeatus
ENSMALG00000016926	PABPN1L	66	59.659	ENSGAGG00000010613	PABPN1L	50	61.333	Gopherus_agassizii
ENSMALG00000016926	PABPN1L	71	51.456	ENSGGOG00000012670	PABPN1L	61	53.571	Gorilla_gorilla
ENSMALG00000016926	PABPN1L	100	89.695	ENSHBUG00000002388	PABPN1L	100	89.695	Haplochromis_burtoni
ENSMALG00000016926	PABPN1L	100	81.716	ENSHCOG00000004151	PABPN1L	99	81.716	Hippocampus_comes
ENSMALG00000016926	PABPN1L	66	66.092	ENSIPUG00000023583	PABPN1L	87	67.241	Ictalurus_punctatus
ENSMALG00000016926	PABPN1L	71	45.685	ENSJJAG00000006433	Pabpn1l	63	49.412	Jaculus_jaculus
ENSMALG00000016926	PABPN1L	82	87.907	ENSKMAG00000001112	PABPN1L	94	88.732	Kryptolebias_marmoratus
ENSMALG00000016926	PABPN1L	100	84.151	ENSLBEG00000011647	PABPN1L	97	85.283	Labrus_bergylta
ENSMALG00000016926	PABPN1L	71	51.942	ENSMFAG00000002924	PABPN1L	61	54.913	Macaca_fascicularis
ENSMALG00000016926	PABPN1L	71	52.913	ENSMMUG00000012438	PABPN1L	61	55.814	Macaca_mulatta
ENSMALG00000016926	PABPN1L	71	51.942	ENSMNEG00000044808	PABPN1L	61	54.913	Macaca_nemestrina
ENSMALG00000016926	PABPN1L	71	51.456	ENSMLEG00000032667	PABPN1L	61	54.167	Mandrillus_leucophaeus
ENSMALG00000016926	PABPN1L	100	88.550	ENSMZEG00005002186	PABPN1L	100	89.313	Maylandia_zebra
ENSMALG00000016926	PABPN1L	73	47.716	ENSMAUG00000014032	Pabpn1l	63	50.303	Mesocricetus_auratus
ENSMALG00000016926	PABPN1L	71	47.264	ENSMICG00000028179	PABPN1L	61	50.000	Microcebus_murinus
ENSMALG00000016926	PABPN1L	75	89.899	ENSMMOG00000017714	PABPN1L	86	89.899	Mola_mola
ENSMALG00000016926	PABPN1L	68	45.588	MGP_CAROLIEiJ_G0031670	Pabpn1l	64	48.276	Mus_caroli
ENSMALG00000016926	PABPN1L	76	45.972	ENSMUSG00000069867	Pabpn1l	64	48.851	Mus_musculus
ENSMALG00000016926	PABPN1L	68	46.569	MGP_PahariEiJ_G0023268	Pabpn1l	64	49.425	Mus_pahari
ENSMALG00000016926	PABPN1L	76	45.833	ENSNGAG00000023992	Pabpn1l	65	47.753	Nannospalax_galili
ENSMALG00000016926	PABPN1L	90	89.873	ENSNBRG00000017078	PABPN1L	100	89.873	Neolamprologus_brichardi
ENSMALG00000016926	PABPN1L	66	50.000	ENSOPRG00000005597	PABPN1L	62	51.176	Ochotona_princeps
ENSMALG00000016926	PABPN1L	72	54.211	ENSOANG00000013901	PABPN1L	70	53.368	Ornithorhynchus_anatinus
ENSMALG00000016926	PABPN1L	100	81.298	ENSORLG00000026560	PABPN1L	100	81.298	Oryzias_latipes
ENSMALG00000016926	PABPN1L	100	80.916	ENSORLG00020015068	PABPN1L	100	80.916	Oryzias_latipes_hni
ENSMALG00000016926	PABPN1L	100	81.298	ENSORLG00015000397	PABPN1L	100	81.298	Oryzias_latipes_hsok
ENSMALG00000016926	PABPN1L	100	78.244	ENSOMEG00000017896	PABPN1L	72	78.244	Oryzias_melastigma
ENSMALG00000016926	PABPN1L	71	50.500	ENSPPAG00000028866	PABPN1L	60	53.571	Pan_paniscus
ENSMALG00000016926	PABPN1L	65	50.847	ENSPPRG00000015106	PABPN1L	61	51.765	Panthera_pardus
ENSMALG00000016926	PABPN1L	65	49.708	ENSPTIG00000015606	PABPN1L	63	50.000	Panthera_tigris_altaica
ENSMALG00000016926	PABPN1L	71	50.500	ENSPTRG00000031120	PABPN1L	60	53.571	Pan_troglodytes
ENSMALG00000016926	PABPN1L	71	52.174	ENSPANG00000026039	PABPN1L	55	45.390	Papio_anubis
ENSMALG00000016926	PABPN1L	61	64.596	ENSPSIG00000003404	PABPN1L	79	61.688	Pelodiscus_sinensis
ENSMALG00000016926	PABPN1L	81	83.412	ENSPMGG00000013927	PABPN1L	93	83.412	Periophthalmus_magnuspinnatus
ENSMALG00000016926	PABPN1L	75	48.636	ENSPEMG00000016624	Pabpn1l	70	47.594	Peromyscus_maniculatus_bairdii
ENSMALG00000016926	PABPN1L	50	61.940	ENSPCIG00000007038	-	74	67.925	Phascolarctos_cinereus
ENSMALG00000016926	PABPN1L	100	85.171	ENSPFOG00000007001	PABPN1L	100	85.551	Poecilia_formosa
ENSMALG00000016926	PABPN1L	100	85.171	ENSPLAG00000018431	PABPN1L	100	85.551	Poecilia_latipinna
ENSMALG00000016926	PABPN1L	69	80.435	ENSPMEG00000000169	-	91	80.435	Poecilia_mexicana
ENSMALG00000016926	PABPN1L	100	85.171	ENSPMEG00000009108	PABPN1L	100	85.551	Poecilia_mexicana
ENSMALG00000016926	PABPN1L	82	87.500	ENSPREG00000022533	PABPN1L	92	87.324	Poecilia_reticulata
ENSMALG00000016926	PABPN1L	71	51.220	ENSPPYG00000007655	PABPN1L	72	49.500	Pongo_abelii
ENSMALG00000016926	PABPN1L	71	48.500	ENSPVAG00000002716	PABPN1L	59	52.976	Pteropus_vampyrus
ENSMALG00000016926	PABPN1L	100	88.550	ENSPNYG00000004803	PABPN1L	100	89.313	Pundamilia_nyererei
ENSMALG00000016926	PABPN1L	71	50.962	ENSRBIG00000030740	PABPN1L	61	52.976	Rhinopithecus_bieti
ENSMALG00000016926	PABPN1L	71	50.962	ENSRROG00000032240	-	61	52.976	Rhinopithecus_roxellana
ENSMALG00000016926	PABPN1L	71	52.657	ENSRROG00000035483	-	61	54.913	Rhinopithecus_roxellana
ENSMALG00000016926	PABPN1L	71	50.739	ENSSBOG00000018410	PABPN1L	61	54.971	Saimiri_boliviensis_boliviensis
ENSMALG00000016926	PABPN1L	100	85.448	ENSSMAG00000021348	PABPN1L	100	84.701	Scophthalmus_maximus
ENSMALG00000016926	PABPN1L	100	90.875	ENSSDUG00000006986	PABPN1L	100	90.114	Seriola_dumerili
ENSMALG00000016926	PABPN1L	100	90.875	ENSSLDG00000021845	PABPN1L	100	90.114	Seriola_lalandi_dorsalis
ENSMALG00000016926	PABPN1L	100	90.875	ENSSPAG00000017978	PABPN1L	100	91.255	Stegastes_partitus
ENSMALG00000016926	PABPN1L	78	42.991	ENSSSCG00000036367	PABPN1L	65	49.171	Sus_scrofa
ENSMALG00000016926	PABPN1L	100	78.244	ENSTRUG00000024725	PABPN1L	100	78.244	Takifugu_rubripes
ENSMALG00000016926	PABPN1L	73	90.104	ENSTNIG00000009416	PABPN1L	100	90.104	Tetraodon_nigroviridis
ENSMALG00000016926	PABPN1L	56	55.975	ENSXETG00000011258	pabpn1l	75	53.988	Xenopus_tropicalis
ENSMALG00000016926	PABPN1L	79	87.923	ENSXCOG00000003254	PABPN1L	92	86.854	Xiphophorus_couchianus
ENSMALG00000016926	PABPN1L	76	87.879	ENSXMAG00000029090	PABPN1L	89	87.879	Xiphophorus_maculatus