EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMALG00000016939 (Gene tree)
Gene ID: 109957135
Gene Symbol: TRA2B
Alias: sfrs10|zgc:56612
Full Name: transformer 2 beta homolog
Gene Type: protein_coding
Species: Monopterus_albus
Status: putative
Strand: Plus strand
Length: 10217 bases
Position: chrKV884712.1:1438865-1449081
Accession: 109957135
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMALP00000024291	RRM_1	PF00076.22	8.5e-21	1	1
ENSMALP00000024281	RRM_1	PF00076.22	1.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMALT00000024749	TRA2B-202	5522	-	ENSMALP00000024291	180 (aa)	-	-
ENSMALT00000024739	TRA2B-201	5297	XM_020594785	ENSMALP00000024281	266 (aa)	XP_020450441	UPI0009B3AD4D

Gene Model

Click here to download ENSMALG00000016939's gene model file

Pathways

Pathway ID	Pathway Name	Source
malb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMALG00000016939's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMALG00000016939	TRA2B	57	31.169	ENSMALG00000008866	hnrnpa0b	52	33.333
ENSMALG00000016939	TRA2B	51	37.179	ENSMALG00000017889	MSI1	53	35.354

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMALG00000016939	TRA2B	86	85.161	ENSG00000136527	TRA2B	60	94.690	Homo_sapiens
ENSMALG00000016939	TRA2B	63	92.035	ENSAPOG00000023727	-	73	66.825	Acanthochromis_polyacanthus
ENSMALG00000016939	TRA2B	100	98.333	ENSAPOG00000004121	TRA2B	100	98.333	Acanthochromis_polyacanthus
ENSMALG00000016939	TRA2B	63	92.035	ENSACIG00000016739	-	64	92.035	Amphilophus_citrinellus
ENSMALG00000016939	TRA2B	98	95.506	ENSACIG00000001289	TRA2B	66	95.506	Amphilophus_citrinellus
ENSMALG00000016939	TRA2B	63	92.035	ENSAOCG00000019109	-	59	92.035	Amphiprion_ocellaris
ENSMALG00000016939	TRA2B	100	98.889	ENSAOCG00000016810	TRA2B	65	98.889	Amphiprion_ocellaris
ENSMALG00000016939	TRA2B	63	92.035	ENSAPEG00000014341	-	59	92.035	Amphiprion_percula
ENSMALG00000016939	TRA2B	100	98.889	ENSAPEG00000016141	TRA2B	100	98.889	Amphiprion_percula
ENSMALG00000016939	TRA2B	89	86.503	ENSATEG00000009454	-	63	92.035	Anabas_testudineus
ENSMALG00000016939	TRA2B	100	97.778	ENSATEG00000020354	TRA2B	100	97.778	Anabas_testudineus
ENSMALG00000016939	TRA2B	86	83.871	ENSANAG00000022734	TRA2B	60	94.690	Aotus_nancymaae
ENSMALG00000016939	TRA2B	100	96.196	ENSACLG00000015461	TRA2B	65	96.196	Astatotilapia_calliptera
ENSMALG00000016939	TRA2B	90	84.568	ENSAMXG00000039469	TRA2B	65	91.150	Astyanax_mexicanus
ENSMALG00000016939	TRA2B	90	70.787	ENSCAFG00020013881	-	60	89.381	Canis_lupus_dingo
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000019157	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000020157	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.527	ENSCHIG00000009569	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000010526	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.376	ENSCHIG00000018730	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.376	ENSCHIG00000002146	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.376	ENSCHIG00000012070	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.376	ENSCHIG00000005100	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.527	ENSCHIG00000019163	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.527	ENSCHIG00000019955	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000008052	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000002457	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000005846	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000019647	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.376	ENSCHIG00000018769	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000007703	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000003630	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.376	ENSCHIG00000005918	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000020262	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	70.166	ENSCHIG00000014653	-	62	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000019487	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000019676	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000008718	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000018948	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	92	78.824	ENSCHIG00000023651	-	65	88.679	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.376	ENSCHIG00000018752	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	75.138	ENSCHIG00000018541	-	60	94.690	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000019807	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000020024	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000006712	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	71.823	ENSCHIG00000019538	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.527	ENSCHIG00000018787	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.527	ENSCHIG00000008520	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000018836	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000010734	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	98	74.719	ENSCHIG00000019019	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000007726	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000019876	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.376	ENSCHIG00000013046	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000001315	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.376	ENSCHIG00000019653	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000000760	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	71.978	ENSCHIG00000019282	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.527	ENSCHIG00000008119	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	98	74.719	ENSCHIG00000004055	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.376	ENSCHIG00000020200	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	98	74.719	ENSCHIG00000012231	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000011760	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000003420	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.527	ENSCHIG00000019491	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.527	ENSCHIG00000019918	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	98	74.719	ENSCHIG00000003818	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.671	ENSCHIG00000024800	-	71	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000019894	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.376	ENSCHIG00000008979	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.376	ENSCHIG00000019996	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	71.823	ENSCHIG00000019012	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000006534	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.376	ENSCHIG00000008466	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000020231	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000020233	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	76	83.088	ENSCHIG00000018954	-	50	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000010995	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000008518	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000002169	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	90	81.481	ENSCHIG00000000044	-	67	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000018907	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.527	ENSCHIG00000013051	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000001726	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.376	ENSCHIG00000010243	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	73.143	ENSCHIG00000019439	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000008819	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.376	ENSCHIG00000005767	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000003352	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.527	ENSCHIG00000019837	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.376	ENSCHIG00000019055	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.376	ENSCHIG00000007642	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	71.978	ENSCHIG00000008446	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.928	ENSCHIG00000009149	-	60	91.150	Capra_hircus
ENSMALG00000016939	TRA2B	89	72.376	ENSCHIG00000020212	-	60	90.265	Capra_hircus
ENSMALG00000016939	TRA2B	86	85.161	ENSTSYG00000000652	-	60	94.690	Carlito_syrichta
ENSMALG00000016939	TRA2B	86	85.161	ENSCCAG00000021227	TRA2B	60	94.690	Cebus_capucinus
ENSMALG00000016939	TRA2B	86	85.161	ENSCATG00000040153	TRA2B	60	94.690	Cercocebus_atys
ENSMALG00000016939	TRA2B	86	85.161	ENSCLAG00000015607	TRA2B	60	94.690	Chinchilla_lanigera
ENSMALG00000016939	TRA2B	74	84.211	ENSCSEG00000002877	TRA2B	62	88.496	Cynoglossus_semilaevis
ENSMALG00000016939	TRA2B	92	93.333	ENSCSEG00000011697	-	64	95.575	Cynoglossus_semilaevis
ENSMALG00000016939	TRA2B	87	73.099	ENSDORG00000027971	-	57	88.889	Dipodomys_ordii
ENSMALG00000016939	TRA2B	86	85.161	ENSDORG00000026038	-	60	94.690	Dipodomys_ordii
ENSMALG00000016939	TRA2B	62	62.832	ENSETEG00000007370	-	57	62.832	Echinops_telfairi
ENSMALG00000016939	TRA2B	89	71.257	ENSEBUG00000005001	tra2b	62	79.825	Eptatretus_burgeri
ENSMALG00000016939	TRA2B	90	89.881	ENSELUG00000010477	-	58	97.345	Esox_lucius
ENSMALG00000016939	TRA2B	69	90.769	ENSFHEG00000008203	-	75	81.690	Fundulus_heteroclitus
ENSMALG00000016939	TRA2B	81	82.581	ENSFHEG00000009235	TRA2B	64	90.826	Fundulus_heteroclitus
ENSMALG00000016939	TRA2B	86	88.679	ENSGMOG00000019323	tra2b	72	62.051	Gadus_morhua
ENSMALG00000016939	TRA2B	60	95.370	ENSGAFG00000009881	TRA2B	73	70.335	Gambusia_affinis
ENSMALG00000016939	TRA2B	91	90.419	ENSGACG00000005986	-	76	82.870	Gasterosteus_aculeatus
ENSMALG00000016939	TRA2B	86	85.161	ENSGGOG00000009844	TRA2B	60	94.690	Gorilla_gorilla
ENSMALG00000016939	TRA2B	100	96.196	ENSHBUG00000003145	TRA2B	65	96.196	Haplochromis_burtoni
ENSMALG00000016939	TRA2B	100	69.841	ENSHGLG00100001298	-	65	85.841	Heterocephalus_glaber_male
ENSMALG00000016939	TRA2B	63	92.035	ENSHCOG00000020095	tra2b	66	74.468	Hippocampus_comes
ENSMALG00000016939	TRA2B	89	82.738	ENSIPUG00000022183	TRA2B	60	92.035	Ictalurus_punctatus
ENSMALG00000016939	TRA2B	86	85.161	ENSSTOG00000006720	TRA2B	60	94.690	Ictidomys_tridecemlineatus
ENSMALG00000016939	TRA2B	86	85.161	ENSJJAG00000011893	Tra2b	60	94.690	Jaculus_jaculus
ENSMALG00000016939	TRA2B	100	96.111	ENSKMAG00000012273	TRA2B	61	96.111	Kryptolebias_marmoratus
ENSMALG00000016939	TRA2B	100	96.111	ENSLBEG00000023163	TRA2B	100	96.111	Labrus_bergylta
ENSMALG00000016939	TRA2B	86	85.161	ENSMMUG00000001185	TRA2B	60	94.690	Macaca_mulatta
ENSMALG00000016939	TRA2B	86	85.161	ENSMNEG00000034273	TRA2B	60	94.690	Macaca_nemestrina
ENSMALG00000016939	TRA2B	100	98.333	ENSMAMG00000001051	-	100	91.667	Mastacembelus_armatus
ENSMALG00000016939	TRA2B	84	88.079	ENSMAMG00000003753	TRA2B	61	92.920	Mastacembelus_armatus
ENSMALG00000016939	TRA2B	100	96.196	ENSMZEG00005007817	TRA2B	65	96.196	Maylandia_zebra
ENSMALG00000016939	TRA2B	84	74.566	ENSMAUG00000002746	-	58	95.238	Mesocricetus_auratus
ENSMALG00000016939	TRA2B	63	84.071	ENSMAUG00000004967	-	55	84.071	Mesocricetus_auratus
ENSMALG00000016939	TRA2B	86	84.516	ENSMICG00000048969	TRA2B	60	94.690	Microcebus_murinus
ENSMALG00000016939	TRA2B	99	97.765	ENSMMOG00000003829	TRA2B	58	97.765	Mola_mola
ENSMALG00000016939	TRA2B	79	81.633	ENSMMOG00000008947	-	67	91.818	Mola_mola
ENSMALG00000016939	TRA2B	61	89.091	ENSMODG00000009767	-	60	89.091	Monodelphis_domestica
ENSMALG00000016939	TRA2B	86	85.161	ENSMUSG00000022858	Tra2b	60	94.690	Mus_musculus
ENSMALG00000016939	TRA2B	86	85.161	ENSNGAG00000011398	Tra2b	60	94.690	Nannospalax_galili
ENSMALG00000016939	TRA2B	98	97.175	ENSNBRG00000016092	TRA2B	67	97.175	Neolamprologus_brichardi
ENSMALG00000016939	TRA2B	63	92.920	ENSNBRG00000022760	-	60	92.920	Neolamprologus_brichardi
ENSMALG00000016939	TRA2B	58	70.476	ENSMEUG00000004223	-	58	69.444	Notamacropus_eugenii
ENSMALG00000016939	TRA2B	63	92.920	ENSONIG00000001274	-	60	92.920	Oreochromis_niloticus
ENSMALG00000016939	TRA2B	98	98.305	ENSONIG00000009025	TRA2B	58	98.305	Oreochromis_niloticus
ENSMALG00000016939	TRA2B	91	89.157	ENSORLG00000016554	tra2b	68	82.412	Oryzias_latipes
ENSMALG00000016939	TRA2B	91	89.881	ENSORLG00020001514	TRA2B	77	83.410	Oryzias_latipes_hni
ENSMALG00000016939	TRA2B	63	89.381	ENSORLG00020015339	tra2a	51	87.129	Oryzias_latipes_hni
ENSMALG00000016939	TRA2B	91	89.157	ENSORLG00015001690	TRA2B	68	81.910	Oryzias_latipes_hsok
ENSMALG00000016939	TRA2B	92	89.286	ENSOMEG00000000738	TRA2B	62	95.575	Oryzias_melastigma
ENSMALG00000016939	TRA2B	86	85.161	ENSPPAG00000034619	TRA2B	60	94.690	Pan_paniscus
ENSMALG00000016939	TRA2B	86	85.161	ENSPTRG00000015707	TRA2B	60	94.690	Pan_troglodytes
ENSMALG00000016939	TRA2B	82	87.248	ENSPKIG00000007871	-	70	67.000	Paramormyrops_kingsleyae
ENSMALG00000016939	TRA2B	86	85.161	ENSPEMG00000020933	-	60	94.690	Peromyscus_maniculatus_bairdii
ENSMALG00000016939	TRA2B	60	94.444	ENSPLAG00000006004	-	75	67.943	Poecilia_latipinna
ENSMALG00000016939	TRA2B	79	83.660	ENSPLAG00000016709	-	56	92.035	Poecilia_latipinna
ENSMALG00000016939	TRA2B	100	97.222	ENSPMEG00000001744	-	65	97.222	Poecilia_mexicana
ENSMALG00000016939	TRA2B	100	97.222	ENSPMEG00000021598	TRA2B	65	97.222	Poecilia_mexicana
ENSMALG00000016939	TRA2B	79	71.329	ENSPREG00000005879	-	62	83.146	Poecilia_reticulata
ENSMALG00000016939	TRA2B	63	93.805	ENSPREG00000009405	TRA2B	58	93.805	Poecilia_reticulata
ENSMALG00000016939	TRA2B	86	84.516	ENSPCOG00000019183	TRA2B	60	94.690	Propithecus_coquereli
ENSMALG00000016939	TRA2B	100	96.196	ENSPNYG00000001238	TRA2B	65	96.196	Pundamilia_nyererei
ENSMALG00000016939	TRA2B	73	87.879	ENSPNYG00000014955	-	51	87.879	Pundamilia_nyererei
ENSMALG00000016939	TRA2B	86	85.161	ENSRBIG00000042036	TRA2B	60	94.690	Rhinopithecus_bieti
ENSMALG00000016939	TRA2B	86	85.161	ENSRROG00000035427	TRA2B	60	94.690	Rhinopithecus_roxellana
ENSMALG00000016939	TRA2B	86	85.161	ENSSBOG00000034804	TRA2B	60	94.690	Saimiri_boliviensis_boliviensis
ENSMALG00000016939	TRA2B	90	85.455	ENSSFOG00015007738	tra2b	76	64.789	Scleropages_formosus
ENSMALG00000016939	TRA2B	100	97.778	ENSSDUG00000017670	TRA2B	100	97.778	Seriola_dumerili
ENSMALG00000016939	TRA2B	98	96.045	ENSSLDG00000007005	TRA2B	66	96.045	Seriola_lalandi_dorsalis
ENSMALG00000016939	TRA2B	100	98.333	ENSSPAG00000009321	TRA2B	100	98.333	Stegastes_partitus
ENSMALG00000016939	TRA2B	62	94.643	ENSTGUG00000017023	-	72	94.643	Taeniopygia_guttata
ENSMALG00000016939	TRA2B	84	83.444	ENSTRUG00000015168	tra2b	62	91.150	Takifugu_rubripes
ENSMALG00000016939	TRA2B	79	85.315	ENSXCOG00000014119	tra2b	61	90.179	Xiphophorus_couchianus
ENSMALG00000016939	TRA2B	100	95.082	ENSXMAG00000001784	TRA2B	100	95.082	Xiphophorus_maculatus
ENSMALG00000016939	TRA2B	79	85.315	ENSXMAG00000009835	-	61	90.179	Xiphophorus_maculatus